RNA–Protein interactions for RNA: ENST00000475060.1

CTPS1-207, Transcript of CTP synthase 1, humanhuman

TSL 5

Gene CTPS1, Length 813 nt, Biotype processed transcript, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTPS1-207ENST00000475060 LRRC37A3O60309 1634 aa8.4□□□□□ -1.06
CTPS1-207ENST00000475060 KDRP35968 1356 aa8.4□□□□□ -1.06
CTPS1-207ENST00000475060 TTC21BQ7Z4L5 1316 aa8.4□□□□□ -1.06
CTPS1-207ENST00000475060 NFE2L2Q16236 605 aa8.4□□□□□ -1.06
CTPS1-207ENST00000475060 PMFBP1Q8TBY8 1022 aa8.4□□□□□ -1.06
CTPS1-207ENST00000475060 COG3Q96JB2 828 aa8.4□□□□□ -1.06
CTPS1-207ENST00000475060 IPO9Q96P70 1041 aaKnown RBP8.4□□□□□ -1.06
CTPS1-207ENST00000475060 ARHGEF10O15013 1369 aa8.39□□□□□ -1.07
CTPS1-207ENST00000475060 KIF16BQ96L93 1317 aa8.39□□□□□ -1.07
CTPS1-207ENST00000475060 ANP32AP39687 249 aaKnown RBP8.39□□□□□ -1.07
CTPS1-207ENST00000475060 LMOD3Q0VAK6 560 aa8.39□□□□□ -1.07
CTPS1-207ENST00000475060 MVPQ14764 893 aaKnown RBP8.39□□□□□ -1.07
CTPS1-207ENST00000475060 ZKSCAN2Q63HK3 967 aa8.39□□□□□ -1.07
CTPS1-207ENST00000475060 NME9Q86XW9 330 aa8.39□□□□□ -1.07
CTPS1-207ENST00000475060 ARHGAP45Q92619 1136 aa8.39□□□□□ -1.07
CTPS1-207ENST00000475060 IFT57Q9NWB7 429 aa8.39□□□□□ -1.07
CTPS1-207ENST00000475060 RRP7AQ9Y3A4 280 aaKnown RBP8.39□□□□□ -1.07
CTPS1-207ENST00000475060 RGPD8O14715 1765 aaPredicted RBP8.38□□□□□ -1.07
CTPS1-207ENST00000475060 U2SURPO15042 1029 aaKnown RBP8.38□□□□□ -1.07
CTPS1-207ENST00000475060 RIPK4P57078 832 aa8.38□□□□□ -1.07
CTPS1-207ENST00000475060 FAM161AQ3B820 660 aa8.38□□□□□ -1.07
CTPS1-207ENST00000475060 NOP58Q9Y2X3 529 aaKnown RBP8.38□□□□□ -1.07
CTPS1-207ENST00000475060 SBNO1A3KN83 1393 aa8.37□□□□□ -1.07
CTPS1-207ENST00000475060 ACEP12821 1306 aa8.37□□□□□ -1.07
CTPS1-207ENST00000475060 PRKAR2BP31323 418 aa8.37□□□□□ -1.07
CTPS1-207ENST00000475060 HDAC1Q13547 482 aaPredicted RBP8.37□□□□□ -1.07
CTPS1-207ENST00000475060 C8orf34Q49A92 452 aa8.37□□□□□ -1.07
CTPS1-207ENST00000475060 LMTK3Q96Q04 1460 aa8.37□□□□□ -1.07
CTPS1-207ENST00000475060 MST1RQ04912 1400 aa8.37□□□□□ -1.07
CTPS1-207ENST00000475060 RTL1A6NKG5 1358 aa8.36□□□□□ -1.07
CTPS1-207ENST00000475060 KIAA0232Q92628 1395 aa8.36□□□□□ -1.07
CTPS1-207ENST00000475060 N4BP2Q86UW6 1770 aaPredicted RBP8.36□□□□□ -1.07
CTPS1-207ENST00000475060 RLBP1P12271 317 aa8.36□□□□□ -1.07
CTPS1-207ENST00000475060 GNAI1P63096 354 aa8.36□□□□□ -1.07
CTPS1-207ENST00000475060 CACNB1Q02641 598 aaPredicted RBP8.36□□□□□ -1.07
CTPS1-207ENST00000475060 EXOSC9Q06265 439 aaKnown RBP8.36□□□□□ -1.07
CTPS1-207ENST00000475060 ATF7IPQ6VMQ6 1270 aa8.36□□□□□ -1.07
CTPS1-207ENST00000475060 SUGP2Q8IX01 1082 aaKnown RBP eCLIP8.36□□□□□ -1.07
CTPS1-207ENST00000475060 DZIP1LQ8IYY4 767 aaKnown RBP8.36□□□□□ -1.07
CTPS1-207ENST00000475060 SSH1Q8WYL5 1049 aa8.36□□□□□ -1.07
CTPS1-207ENST00000475060 DDX19BQ9UMR2 479 aa8.36□□□□□ -1.07
CTPS1-207ENST00000475060 AMOTL2Q9Y2J4 779 aa8.36□□□□□ -1.07
CTPS1-207ENST00000475060 COG6Q9Y2V7 657 aa8.36□□□□□ -1.07
CTPS1-207ENST00000475060 EMILIN1Q9Y6C2 1016 aa8.36□□□□□ -1.07
CTPS1-207ENST00000475060 FLT4P35916 1363 aa8.35□□□□□ -1.07
CTPS1-207ENST00000475060 IPO8O15397 1037 aaKnown RBP8.35□□□□□ -1.07
CTPS1-207ENST00000475060 CAPN15O75808 1086 aa8.35□□□□□ -1.07
CTPS1-207ENST00000475060 IGHDP01880 384 aa8.35□□□□□ -1.07
CTPS1-207ENST00000475060 NEFMP07197 916 aa8.35□□□□□ -1.07
CTPS1-207ENST00000475060 TRIM27P14373 513 aa8.35□□□□□ -1.07
CTPS1-207ENST00000475060 NEUROD2Q15784 382 aa8.35□□□□□ -1.07
CTPS1-207ENST00000475060 PANK1Q8TE04 598 aa8.35□□□□□ -1.07
CTPS1-207ENST00000475060 CFAP44Q96MT7 982 aa8.35□□□□□ -1.07
CTPS1-207ENST00000475060 ADGRL3Q9HAR2 1447 aa8.35□□□□□ -1.07
CTPS1-207ENST00000475060 CAMTA1Q9Y6Y1 1673 aa8.34□□□□□ -1.07
CTPS1-207ENST00000475060 CACNA1FO60840 1977 aa8.34□□□□□ -1.07
CTPS1-207ENST00000475060 CANXP27824 592 aaKnown RBP8.34□□□□□ -1.07
CTPS1-207ENST00000475060 HAP1P54257 671 aaPredicted RBP8.34□□□□□ -1.07
CTPS1-207ENST00000475060 SMC5Q8IY18 1101 aa8.34□□□□□ -1.07
CTPS1-207ENST00000475060 TSR2Q969E8 191 aaKnown RBP8.34□□□□□ -1.07
CTPS1-207ENST00000475060 DDRGK1Q96HY6 314 aa8.34□□□□□ -1.07
CTPS1-207ENST00000475060 PHACTR3Q96KR7 559 aa8.34□□□□□ -1.07
CTPS1-207ENST00000475060 CHMP4BQ9H444 224 aaKnown RBP8.34□□□□□ -1.07
CTPS1-207ENST00000475060 PCDHB15Q9Y5E8 787 aa8.34□□□□□ -1.07
CTPS1-207ENST00000475060 NCAPD2Q15021 1401 aa8.34□□□□□ -1.07
CTPS1-207ENST00000475060 NFAT5O94916 1531 aa8.34□□□□□ -1.08
CTPS1-207ENST00000475060 ABCC4O15439 1325 aa8.33□□□□□ -1.08
CTPS1-207ENST00000475060 IGSF1Q8N6C5 1336 aa8.33□□□□□ -1.08
CTPS1-207ENST00000475060 NCKAP5LQ9HCH0 1330 aa8.33□□□□□ -1.08
CTPS1-207ENST00000475060 VAMP4O75379 141 aa8.33□□□□□ -1.08
CTPS1-207ENST00000475060 CEBPAP49715 358 aaPredicted RBP8.33□□□□□ -1.08
CTPS1-207ENST00000475060 CRB1P82279 1406 aa8.33□□□□□ -1.08
CTPS1-207ENST00000475060 EIF4A2Q14240 407 aaKnown RBP8.33□□□□□ -1.08
CTPS1-207ENST00000475060 MED1Q15648 1581 aaPredicted RBP8.33□□□□□ -1.08
CTPS1-207ENST00000475060 RWDD1Q9H446 243 aaPredicted RBP8.33□□□□□ -1.08
CTPS1-207ENST00000475060 SMC4Q9NTJ3 1288 aa8.33□□□□□ -1.08
CTPS1-207ENST00000475060 ZBTB40Q9NUA8 1239 aa8.33□□□□□ -1.08
CTPS1-207ENST00000475060 KIF1AQ12756 1690 aa8.33□□□□□ -1.08
CTPS1-207ENST00000475060 SLIT3O75094 1523 aa8.33□□□□□ -1.08
CTPS1-207ENST00000475060 SOS1Q07889 1333 aaPredicted RBP8.32□□□□□ -1.08
CTPS1-207ENST00000475060 HTATSF1O43719 755 aaKnown RBP8.32□□□□□ -1.08
CTPS1-207ENST00000475060 TRHP20396 242 aaPredicted RBP8.32□□□□□ -1.08
CTPS1-207ENST00000475060 MRPL50Q8N5N7 158 aaKnown RBP8.32□□□□□ -1.08
CTPS1-207ENST00000475060 SLC26A8Q96RN1 970 aa8.32□□□□□ -1.08
CTPS1-207ENST00000475060 ZNF219Q9P2Y4 722 aaPredicted RBP8.32□□□□□ -1.08
CTPS1-207ENST00000475060 ZRANB1Q9UGI0 708 aa8.32□□□□□ -1.08
CTPS1-207ENST00000475060 PLEKHG2Q9H7P9 1386 aa8.32□□□□□ -1.08
CTPS1-207ENST00000475060 RGS12O14924 1447 aa8.31□□□□□ -1.08
CTPS1-207ENST00000475060 LTN1O94822 1766 aa8.31□□□□□ -1.08
CTPS1-207ENST00000475060 ABCC6O95255 1503 aa8.31□□□□□ -1.08
CTPS1-207ENST00000475060 FRAT1Q92837 279 aaPredicted RBP8.31□□□□□ -1.08
CTPS1-207ENST00000475060 BABAM1Q9NWV8 329 aa8.31□□□□□ -1.08
CTPS1-207ENST00000475060 TNNQ9UQP3 1299 aa8.31□□□□□ -1.08
CTPS1-207ENST00000475060 TRPM3Q9HCF6 1732 aaPredicted RBP8.31□□□□□ -1.08
CTPS1-207ENST00000475060 FAM208AQ9UK61 1670 aaKnown RBP8.3□□□□□ -1.08
CTPS1-207ENST00000475060 USP19O94966 1318 aa8.3□□□□□ -1.08
CTPS1-207ENST00000475060 MAP3K19Q56UN5 1328 aa8.3□□□□□ -1.08
CTPS1-207ENST00000475060 CHL1O00533 1208 aa8.3□□□□□ -1.08
CTPS1-207ENST00000475060 RRS1Q15050 365 aaKnown RBP8.3□□□□□ -1.08
CTPS1-207ENST00000475060 FTSJ3Q8IY81 847 aaKnown RBP8.3□□□□□ -1.08
Retrieved 100 of 20,778 RNA–protein pairs in 10.2 ms