RNA–Protein interactions for RNA: ENST00000474961.5

DDX39B-217, Transcript of DExD-box helicase 39B, humanhuman

TSL 2

Gene DDX39B, Length 974 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX39B-217ENST00000474961 XPCQ01831 940 aaPredicted RBP12.95□□□□□ -0.34
DDX39B-217ENST00000474961 NME9Q86XW9 330 aa12.95□□□□□ -0.34
DDX39B-217ENST00000474961 PRKRIP1Q9H875 184 aaPredicted RBP12.95□□□□□ -0.34
DDX39B-217ENST00000474961 NSD2O96028 1365 aa12.94□□□□□ -0.34
DDX39B-217ENST00000474961 PIK3C2AO00443 1686 aa12.94□□□□□ -0.34
DDX39B-217ENST00000474961 GGNBP2Q9H3C7 697 aa12.94□□□□□ -0.34
DDX39B-217ENST00000474961 PXDNQ92626 1479 aa12.93□□□□□ -0.34
DDX39B-217ENST00000474961 RALBP1Q15311 655 aa12.93□□□□□ -0.34
DDX39B-217ENST00000474961 PCDHB13Q9Y5F0 798 aa12.93□□□□□ -0.34
DDX39B-217ENST00000474961 PARD3Q8TEW0 1356 aa12.93□□□□□ -0.34
DDX39B-217ENST00000474961 ALS2Q96Q42 1657 aa12.93□□□□□ -0.34
DDX39B-217ENST00000474961 MAP3K13O43283 966 aa12.92□□□□□ -0.34
DDX39B-217ENST00000474961 PIP4K2BP78356 416 aa12.92□□□□□ -0.34
DDX39B-217ENST00000474961 MORC1Q86VD1 984 aa12.92□□□□□ -0.34
DDX39B-217ENST00000474961 MARF1Q9Y4F3 1742 aaKnown RBP12.92□□□□□ -0.34
DDX39B-217ENST00000474961 SBNO1A3KN83 1393 aa12.92□□□□□ -0.34
DDX39B-217ENST00000474961 ABTB2Q8N961 1025 aa12.91□□□□□ -0.34
DDX39B-217ENST00000474961 USP54Q70EL1 1684 aa12.91□□□□□ -0.34
DDX39B-217ENST00000474961 USP31Q70CQ4 1352 aa12.91□□□□□ -0.34
DDX39B-217ENST00000474961 AHDC1Q5TGY3 1603 aaPredicted RBP12.91□□□□□ -0.34
DDX39B-217ENST00000474961 SOS2Q07890 1332 aaPredicted RBP12.9□□□□□ -0.34
DDX39B-217ENST00000474961 MAP2P11137 1827 aaKnown RBP12.9□□□□□ -0.34
DDX39B-217ENST00000474961 COG3Q96JB2 828 aa12.9□□□□□ -0.34
DDX39B-217ENST00000474961 PHLPP1O60346 1717 aa12.9□□□□□ -0.34
DDX39B-217ENST00000474961 OVOS2A0A0J9YW53 1432 aa12.89□□□□□ -0.35
DDX39B-217ENST00000474961 OVOS2Q6IE36 1432 aa12.89□□□□□ -0.35
DDX39B-217ENST00000474961 ECM2O94769 699 aaPredicted RBP12.89□□□□□ -0.35
DDX39B-217ENST00000474961 NLRP6P59044 892 aa12.89□□□□□ -0.35
DDX39B-217ENST00000474961 NUTM2GQ5VZR2 741 aa12.89□□□□□ -0.35
DDX39B-217ENST00000474961 LMOD2Q6P5Q4 547 aa12.89□□□□□ -0.35
DDX39B-217ENST00000474961 SPATA31A3Q5VYP0 1347 aa12.88□□□□□ -0.35
DDX39B-217ENST00000474961 TNS3Q68CZ2 1445 aa12.88□□□□□ -0.35
DDX39B-217ENST00000474961 TNNT2P45379 298 aaPredicted RBP12.88□□□□□ -0.35
DDX39B-217ENST00000474961 MYBBP1AQ9BQG0 1328 aaKnown RBP12.88□□□□□ -0.35
DDX39B-217ENST00000474961 PPP2R1AP30153 589 aa12.87□□□□□ -0.35
DDX39B-217ENST00000474961 ZNF467Q7Z7K2 595 aaPredicted RBP12.87□□□□□ -0.35
DDX39B-217ENST00000474961 NLRP13Q86W25 1043 aa12.87□□□□□ -0.35
DDX39B-217ENST00000474961 MS4A3Q96HJ5 214 aa12.87□□□□□ -0.35
DDX39B-217ENST00000474961 GALR2O43603 387 aaPredicted RBP12.86□□□□□ -0.35
DDX39B-217ENST00000474961 ARHGEF10O15013 1369 aa12.85□□□□□ -0.35
DDX39B-217ENST00000474961 COL16A1Q07092 1604 aaPredicted RBP12.85□□□□□ -0.35
DDX39B-217ENST00000474961 FBLN1P23142 703 aa12.85□□□□□ -0.35
DDX39B-217ENST00000474961 DCBLD2Q96PD2 775 aa12.85□□□□□ -0.35
DDX39B-217ENST00000474961 CRYBG1Q9Y4K1 1723 aa12.85□□□□□ -0.35
DDX39B-217ENST00000474961 CCER2I3L3R5 266 aa12.84□□□□□ -0.35
DDX39B-217ENST00000474961 LRRC59Q96AG4 307 aaKnown RBP12.84□□□□□ -0.35
DDX39B-217ENST00000474961 USP19O94966 1318 aa12.84□□□□□ -0.35
DDX39B-217ENST00000474961 PHRF1Q9P1Y6 1649 aaKnown RBP12.84□□□□□ -0.35
DDX39B-217ENST00000474961 SLIT3O75094 1523 aa12.83□□□□□ -0.35
DDX39B-217ENST00000474961 AATKQ6ZMQ8 1374 aa12.83□□□□□ -0.36
DDX39B-217ENST00000474961 MED1Q15648 1581 aaPredicted RBP12.83□□□□□ -0.36
DDX39B-217ENST00000474961 SOX12O15370 315 aa12.83□□□□□ -0.36
DDX39B-217ENST00000474961 CCDC184Q52MB2 194 aa12.83□□□□□ -0.36
DDX39B-217ENST00000474961 LTN1O94822 1766 aa12.82□□□□□ -0.36
DDX39B-217ENST00000474961 MTHFSP49914 203 aa12.82□□□□□ -0.36
DDX39B-217ENST00000474961 TAOK2Q9UL54 1235 aa12.82□□□□□ -0.36
DDX39B-217ENST00000474961 NFAT5O94916 1531 aa12.82□□□□□ -0.36
DDX39B-217ENST00000474961 ABCA3Q99758 1704 aa12.82□□□□□ -0.36
DDX39B-217ENST00000474961 GCP02774 474 aa12.81□□□□□ -0.36
DDX39B-217ENST00000474961 RRS1Q15050 365 aaKnown RBP12.81□□□□□ -0.36
DDX39B-217ENST00000474961 IFNL1Q8IU54 200 aa12.81□□□□□ -0.36
DDX39B-217ENST00000474961 KCNH5Q8NCM2 988 aa12.81□□□□□ -0.36
DDX39B-217ENST00000474961 CABLES1Q8TDN4 633 aa12.81□□□□□ -0.36
DDX39B-217ENST00000474961 MRS2Q9HD23 443 aa12.81□□□□□ -0.36
DDX39B-217ENST00000474961 POLKQ9UBT6 870 aa12.81□□□□□ -0.36
DDX39B-217ENST00000474961 COL22A1Q8NFW1 1626 aaPredicted RBP12.8□□□□□ -0.36
DDX39B-217ENST00000474961 SOCS7O14512 581 aa12.8□□□□□ -0.36
DDX39B-217ENST00000474961 EMILIN1Q9Y6C2 1016 aa12.8□□□□□ -0.36
DDX39B-217ENST00000474961 PNPLA6Q8IY17 1366 aa12.8□□□□□ -0.36
DDX39B-217ENST00000474961 PEAK1Q9H792 1746 aa12.79□□□□□ -0.36
DDX39B-217ENST00000474961 MAP3K19Q56UN5 1328 aa12.79□□□□□ -0.36
DDX39B-217ENST00000474961 SMG6Q86US8 1419 aaKnown RBP12.79□□□□□ -0.36
DDX39B-217ENST00000474961 SHPRHQ149N8 1683 aa12.78□□□□□ -0.36
DDX39B-217ENST00000474961 PPM1GO15355 546 aaPredicted RBP12.78□□□□□ -0.36
DDX39B-217ENST00000474961 PCDHB8Q9UN66 801 aa12.78□□□□□ -0.36
DDX39B-217ENST00000474961 RGPD5Q99666 1765 aa12.77□□□□□ -0.36
DDX39B-217ENST00000474961 HSPA1LP34931 641 aa12.77□□□□□ -0.37
DDX39B-217ENST00000474961 CFAP53Q96M91 514 aa12.77□□□□□ -0.37
DDX39B-217ENST00000474961 CDK12Q9NYV4 1490 aaPredicted RBP12.77□□□□□ -0.37
DDX39B-217ENST00000474961 ZBTB7CA1YPR0 619 aa12.76□□□□□ -0.37
DDX39B-217ENST00000474961 AMPHP49418 695 aa12.76□□□□□ -0.37
DDX39B-217ENST00000474961 HAP1P54257 671 aaPredicted RBP12.76□□□□□ -0.37
DDX39B-217ENST00000474961 ZC3H6P61129 1189 aaKnown RBP12.76□□□□□ -0.37
DDX39B-217ENST00000474961 ARHGEF25Q86VW2 580 aa12.76□□□□□ -0.37
DDX39B-217ENST00000474961 INSRP06213 1382 aa12.76□□□□□ -0.37
DDX39B-217ENST00000474961 RIOK3O14730 519 aaKnown RBP12.75□□□□□ -0.37
DDX39B-217ENST00000474961 COL3A1P02461 1466 aaPredicted RBP12.75□□□□□ -0.37
DDX39B-217ENST00000474961 TIE1P35590 1138 aa12.75□□□□□ -0.37
DDX39B-217ENST00000474961 COL18A1P39060 1754 aa12.75□□□□□ -0.37
DDX39B-217ENST00000474961 KIF24Q5T7B8 1368 aa12.75□□□□□ -0.37
DDX39B-217ENST00000474961 RTL1A6NKG5 1358 aa12.74□□□□□ -0.37
DDX39B-217ENST00000474961 CPDO75976 1380 aa12.74□□□□□ -0.37
DDX39B-217ENST00000474961 FLT4P35916 1363 aa12.74□□□□□ -0.37
DDX39B-217ENST00000474961 JCADQ9P266 1359 aa12.74□□□□□ -0.37
DDX39B-217ENST00000474961 HOXC9P31274 260 aa12.74□□□□□ -0.37
DDX39B-217ENST00000474961 PNISRQ8TF01 805 aaKnown RBP12.74□□□□□ -0.37
DDX39B-217ENST00000474961 IP6K1Q92551 441 aa12.74□□□□□ -0.37
DDX39B-217ENST00000474961 KIAA0232Q92628 1395 aa12.73□□□□□ -0.37
DDX39B-217ENST00000474961 HSP90AB2PQ58FF8 381 aa12.73□□□□□ -0.37
DDX39B-217ENST00000474961 ILDR2Q71H61 639 aa12.73□□□□□ -0.37
Retrieved 100 of 20,778 RNA–protein pairs in 33.7 ms