RNA–Protein interactions for RNA: ENST00000474412.1

VPS50-211, Transcript of VPS50, EARP/GARPII complex subunit, humanhuman

TSL 5

Gene VPS50, Length 819 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS50-211ENST00000474412 CABLES1Q8TDN4 633 aa11.45□□□□□ -0.58
VPS50-211ENST00000474412 UBTFP17480 764 aaKnown RBP11.44□□□□□ -0.58
VPS50-211ENST00000474412 SH3D19Q5HYK7 790 aa11.44□□□□□ -0.58
VPS50-211ENST00000474412 PRPF38BQ5VTL8 546 aaKnown RBP11.44□□□□□ -0.58
VPS50-211ENST00000474412 CCDC24Q8N4L8 307 aa11.44□□□□□ -0.58
VPS50-211ENST00000474412 ARHGEF40Q8TER5 1519 aa11.44□□□□□ -0.58
VPS50-211ENST00000474412 ARAP3Q8WWN8 1544 aa11.44□□□□□ -0.58
VPS50-211ENST00000474412 PREX2Q70Z35 1606 aa11.43□□□□□ -0.58
VPS50-211ENST00000474412 TUSC1Q2TAM9 212 aa11.43□□□□□ -0.58
VPS50-211ENST00000474412 LIAT1Q6ZQX7 453 aa11.43□□□□□ -0.58
VPS50-211ENST00000474412 FMN1Q68DA7 1419 aa11.43□□□□□ -0.58
VPS50-211ENST00000474412 ZBTB24O43167 697 aaPredicted RBP11.42□□□□□ -0.58
VPS50-211ENST00000474412 SKIV2LQ15477 1246 aaKnown RBP11.42□□□□□ -0.58
VPS50-211ENST00000474412 QPCTQ16769 361 aa11.42□□□□□ -0.58
VPS50-211ENST00000474412 IL27Q8NEV9 243 aa11.42□□□□□ -0.58
VPS50-211ENST00000474412 EMID1Q96A84 441 aaPredicted RBP11.42□□□□□ -0.58
VPS50-211ENST00000474412 NEO1Q92859 1461 aa11.41□□□□□ -0.58
VPS50-211ENST00000474412 BCORL1Q5H9F3 1711 aa11.4□□□□□ -0.58
VPS50-211ENST00000474412 ITSN2Q9NZM3 1697 aa11.4□□□□□ -0.58
VPS50-211ENST00000474412 RPIAP49247 311 aa11.4□□□□□ -0.58
VPS50-211ENST00000474412 SPRYD7Q5W111 196 aa11.4□□□□□ -0.58
VPS50-211ENST00000474412 TSC1Q92574 1164 aa11.4□□□□□ -0.58
VPS50-211ENST00000474412 NUDT12Q9BQG2 462 aa11.4□□□□□ -0.58
VPS50-211ENST00000474412 IRX2Q9BZI1 471 aaPredicted RBP11.4□□□□□ -0.58
VPS50-211ENST00000474412 CFAP99D6REC4 459 aa11.39□□□□□ -0.59
VPS50-211ENST00000474412 LILRB3O75022 631 aa11.39□□□□□ -0.59
VPS50-211ENST00000474412 ADAMTSL3P82987 1691 aa11.39□□□□□ -0.59
VPS50-211ENST00000474412 ZMYM4Q5VZL5 1548 aa11.39□□□□□ -0.59
VPS50-211ENST00000474412 FANCAO15360 1455 aa11.38□□□□□ -0.59
VPS50-211ENST00000474412 PTPRNQ16849 979 aa11.38□□□□□ -0.59
VPS50-211ENST00000474412 DESI1Q6ICB0 168 aa11.38□□□□□ -0.59
VPS50-211ENST00000474412 MADDQ8WXG6 1647 aa11.38□□□□□ -0.59
VPS50-211ENST00000474412 FYCO1Q9BQS8 1478 aa11.38□□□□□ -0.59
VPS50-211ENST00000474412 RIMS1Q86UR5 1692 aaKnown RBP11.37□□□□□ -0.59
VPS50-211ENST00000474412 CLIP1P30622 1438 aa11.37□□□□□ -0.59
VPS50-211ENST00000474412 CCNYL3P0C7X3 344 aa11.37□□□□□ -0.59
VPS50-211ENST00000474412 ZNF697Q5TEC3 545 aa11.37□□□□□ -0.59
VPS50-211ENST00000474412 ZNF598Q86UK7 904 aaKnown RBP11.37□□□□□ -0.59
VPS50-211ENST00000474412 PROCA1Q8NCQ7 364 aaPredicted RBP11.37□□□□□ -0.59
VPS50-211ENST00000474412 CASKIN1Q8WXD9 1431 aa11.36□□□□□ -0.59
VPS50-211ENST00000474412 CD2BP2O95400 341 aaKnown RBP11.36□□□□□ -0.59
VPS50-211ENST00000474412 CCDC18Q5T9S5 1454 aa11.36□□□□□ -0.59
VPS50-211ENST00000474412 FER1L4A9Z1Z3 1794 aa11.36□□□□□ -0.59
VPS50-211ENST00000474412 TROQ12816 1431 aaPredicted RBP11.35□□□□□ -0.59
VPS50-211ENST00000474412 RTL5Q5HYW3 569 aaPredicted RBP11.35□□□□□ -0.59
VPS50-211ENST00000474412 HELBQ8NG08 1087 aaPredicted RBP11.35□□□□□ -0.59
VPS50-211ENST00000474412 PCMTD1Q96MG8 357 aaPredicted RBP11.34□□□□□ -0.59
VPS50-211ENST00000474412 ABCA6Q8N139 1617 aa11.34□□□□□ -0.59
VPS50-211ENST00000474412 TRIM32Q13049 653 aa11.33□□□□□ -0.6
VPS50-211ENST00000474412 GNL3Q9BVP2 549 aaKnown RBP eCLIP11.33□□□□□ -0.6
VPS50-211ENST00000474412 ABCC1P33527 1531 aa11.33□□□□□ -0.6
VPS50-211ENST00000474412 ARHGAP5Q13017 1502 aa11.33□□□□□ -0.6
VPS50-211ENST00000474412 ZFYVE16Q7Z3T8 1539 aa11.33□□□□□ -0.6
VPS50-211ENST00000474412 AKNAQ7Z591 1439 aa11.33□□□□□ -0.6
VPS50-211ENST00000474412 SAMD9LQ8IVG5 1584 aa11.33□□□□□ -0.6
VPS50-211ENST00000474412 HECW2Q9P2P5 1572 aa11.33□□□□□ -0.6
VPS50-211ENST00000474412 GFRA3O60609 400 aa11.32□□□□□ -0.6
VPS50-211ENST00000474412 CTHP32929 405 aa11.32□□□□□ -0.6
VPS50-211ENST00000474412 LYPD8Q6UX82 237 aa11.32□□□□□ -0.6
VPS50-211ENST00000474412 GOPCQ9HD26 462 aa11.32□□□□□ -0.6
VPS50-211ENST00000474412 PDZRN3Q9UPQ7 1066 aa11.32□□□□□ -0.6
VPS50-211ENST00000474412 KDM5CP41229 1560 aa11.32□□□□□ -0.6
VPS50-211ENST00000474412 DENND4BO75064 1496 aaPredicted RBP11.32□□□□□ -0.6
VPS50-211ENST00000474412 RAPGEF3O95398 923 aa11.31□□□□□ -0.6
VPS50-211ENST00000474412 CEP162Q5TB80 1403 aa11.31□□□□□ -0.6
VPS50-211ENST00000474412 POGZQ7Z3K3 1410 aa11.31□□□□□ -0.6
VPS50-211ENST00000474412 YEATS2Q9ULM3 1422 aa11.31□□□□□ -0.6
VPS50-211ENST00000474412 TIAM1Q13009 1591 aa11.3□□□□□ -0.6
VPS50-211ENST00000474412 DIP2CQ9Y2E4 1556 aa11.3□□□□□ -0.6
VPS50-211ENST00000474412 PLCH2O75038 1416 aa11.3□□□□□ -0.6
VPS50-211ENST00000474412 PLEKHD1A6NEE1 506 aa11.3□□□□□ -0.6
VPS50-211ENST00000474412 EVA1BQ9NVM1 165 aa11.3□□□□□ -0.6
VPS50-211ENST00000474412 KIDINS220Q9ULH0 1771 aa11.3□□□□□ -0.6
VPS50-211ENST00000474412 KCNH2Q12809 1159 aa11.29□□□□□ -0.6
VPS50-211ENST00000474412 FOXC1Q12948 553 aa11.29□□□□□ -0.6
VPS50-211ENST00000474412 LAPTM4AQ15012 233 aa11.29□□□□□ -0.6
VPS50-211ENST00000474412 TNFRSF10AO00220 468 aa11.28□□□□□ -0.6
VPS50-211ENST00000474412 PPP2R2DQ66LE6 453 aa11.28□□□□□ -0.6
VPS50-211ENST00000474412 PTCRAQ6ISU1 281 aaPredicted RBP11.28□□□□□ -0.6
VPS50-211ENST00000474412 UNC93B1Q9H1C4 597 aa11.28□□□□□ -0.6
VPS50-211ENST00000474412 EHBP1L1Q8N3D4 1523 aa11.28□□□□□ -0.6
VPS50-211ENST00000474412 PHLDB1Q86UU1 1377 aa11.28□□□□□ -0.6
VPS50-211ENST00000474412 SYCP2Q9BX26 1530 aa11.27□□□□□ -0.61
VPS50-211ENST00000474412 ARHGEF12Q9NZN5 1544 aa11.27□□□□□ -0.61
VPS50-211ENST00000474412 PER1O15534 1290 aaPredicted RBP11.27□□□□□ -0.61
VPS50-211ENST00000474412 FBXO31Q5XUX0 539 aaPredicted RBP11.26□□□□□ -0.61
VPS50-211ENST00000474412 TRIM67Q6ZTA4 783 aa11.26□□□□□ -0.61
VPS50-211ENST00000474412 MAP10Q9P2G4 905 aa11.26□□□□□ -0.61
VPS50-211ENST00000474412 SUPT6HQ7KZ85 1726 aaKnown RBP11.26□□□□□ -0.61
VPS50-211ENST00000474412 SCAPERQ9BY12 1400 aa11.26□□□□□ -0.61
VPS50-211ENST00000474412 ADGBQ8N7X0 1667 aa11.25□□□□□ -0.61
VPS50-211ENST00000474412 NRG2O14511 850 aaPredicted RBP11.25□□□□□ -0.61
VPS50-211ENST00000474412 AP1G2O75843 785 aa11.25□□□□□ -0.61
VPS50-211ENST00000474412 INO80Q9ULG1 1556 aaPredicted RBP11.24□□□□□ -0.61
VPS50-211ENST00000474412 GDF9O60383 454 aa11.24□□□□□ -0.61
VPS50-211ENST00000474412 F12P00748 615 aaPredicted RBP11.24□□□□□ -0.61
VPS50-211ENST00000474412 WNT7BP56706 349 aa11.24□□□□□ -0.61
VPS50-211ENST00000474412 PRR20EP86478 221 aa11.24□□□□□ -0.61
VPS50-211ENST00000474412 PRR20CP86479 221 aa11.24□□□□□ -0.61
VPS50-211ENST00000474412 PRR20DP86480 221 aa11.24□□□□□ -0.61
Retrieved 100 of 20,778 RNA–protein pairs in 30 ms