RNA–Protein interactions for RNA: ENST00000474336.5

PKNOX1-205, Transcript of PBX/knotted 1 homeobox 1, humanhuman

TSL 2

Gene PKNOX1, Length 438 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PKNOX1-205ENST00000474336 NFX1Q12986 1120 aaKnown RBP11.33□□□□□ -0.6
PKNOX1-205ENST00000474336 PRDM9Q9NQV7 894 aa11.33□□□□□ -0.6
PKNOX1-205ENST00000474336 PPRC1Q5VV67 1664 aaKnown RBP11.33□□□□□ -0.6
PKNOX1-205ENST00000474336 CCDC141Q6ZP82 1450 aa11.32□□□□□ -0.6
PKNOX1-205ENST00000474336 MSS51Q4VC12 460 aa11.32□□□□□ -0.6
PKNOX1-205ENST00000474336 SULF1Q8IWU6 871 aa11.32□□□□□ -0.6
PKNOX1-205ENST00000474336 STK17AQ9UEE5 414 aa11.32□□□□□ -0.6
PKNOX1-205ENST00000474336 ADGRL1O94910 1474 aa11.32□□□□□ -0.6
PKNOX1-205ENST00000474336 WNT7AO00755 349 aa11.31□□□□□ -0.6
PKNOX1-205ENST00000474336 RBM26Q5T8P6 1007 aaKnown RBP11.31□□□□□ -0.6
PKNOX1-205ENST00000474336 EFCAB2Q5VUJ9 269 aa11.31□□□□□ -0.6
PKNOX1-205ENST00000474336 ABCC5O15440 1437 aa11.3□□□□□ -0.6
PKNOX1-205ENST00000474336 PTPRKQ15262 1439 aa11.3□□□□□ -0.6
PKNOX1-205ENST00000474336 WIPF1O43516 503 aa11.3□□□□□ -0.6
PKNOX1-205ENST00000474336 SNIP1Q8TAD8 396 aaKnown RBP11.3□□□□□ -0.6
PKNOX1-205ENST00000474336 CHIC2Q9UKJ5 165 aa11.3□□□□□ -0.6
PKNOX1-205ENST00000474336 SHANK2Q9UPX8 1470 aa11.3□□□□□ -0.6
PKNOX1-205ENST00000474336 SMPD1P17405 629 aa11.29□□□□□ -0.6
PKNOX1-205ENST00000474336 INSM1Q01101 510 aaPredicted RBP11.29□□□□□ -0.6
PKNOX1-205ENST00000474336 FAM69CQ0P6D2 419 aa11.29□□□□□ -0.6
PKNOX1-205ENST00000474336 SMYD5Q6GMV2 418 aa11.29□□□□□ -0.6
PKNOX1-205ENST00000474336 MAST1Q9Y2H9 1570 aa11.28□□□□□ -0.6
PKNOX1-205ENST00000474336 C9orf84Q5VXU9 1444 aa11.28□□□□□ -0.6
PKNOX1-205ENST00000474336 HNRNPMP52272 730 aaKnown RBP eCLIP11.28□□□□□ -0.6
PKNOX1-205ENST00000474336 GRIPAP1Q4V328 841 aa11.28□□□□□ -0.6
PKNOX1-205ENST00000474336 NLRP7Q8WX94 980 aa11.28□□□□□ -0.6
PKNOX1-205ENST00000474336 ATP13A2Q9NQ11 1180 aa11.28□□□□□ -0.6
PKNOX1-205ENST00000474336 TEX14Q8IWB6 1497 aa11.27□□□□□ -0.6
PKNOX1-205ENST00000474336 RICTORQ6R327 1708 aa11.27□□□□□ -0.61
PKNOX1-205ENST00000474336 ARHGEF12Q9NZN5 1544 aa11.27□□□□□ -0.61
PKNOX1-205ENST00000474336 RNF19BQ6ZMZ0 732 aa11.27□□□□□ -0.61
PKNOX1-205ENST00000474336 PLXNC1O60486 1568 aa11.27□□□□□ -0.61
PKNOX1-205ENST00000474336 AKNAQ7Z591 1439 aa11.26□□□□□ -0.61
PKNOX1-205ENST00000474336 KIAA1107Q9UPP5 1409 aa11.26□□□□□ -0.61
PKNOX1-205ENST00000474336 NEO1Q92859 1461 aa11.26□□□□□ -0.61
PKNOX1-205ENST00000474336 MBD5Q9P267 1494 aa11.26□□□□□ -0.61
PKNOX1-205ENST00000474336 INO80Q9ULG1 1556 aaPredicted RBP11.26□□□□□ -0.61
PKNOX1-205ENST00000474336 TESPA1A2RU30 521 aaPredicted RBP11.26□□□□□ -0.61
PKNOX1-205ENST00000474336 TRIM32Q13049 653 aa11.26□□□□□ -0.61
PKNOX1-205ENST00000474336 HFM1A2PYH4 1435 aa11.26□□□□□ -0.61
PKNOX1-205ENST00000474336 SETD5Q9C0A6 1442 aa11.26□□□□□ -0.61
PKNOX1-205ENST00000474336 KDM6BO15054 1643 aa11.25□□□□□ -0.61
PKNOX1-205ENST00000474336 SENP2Q9HC62 589 aa11.25□□□□□ -0.61
PKNOX1-205ENST00000474336 RRP7BPQ9NSQ0 103 aa11.25□□□□□ -0.61
PKNOX1-205ENST00000474336 RAB3GAP2Q9H2M9 1393 aa11.25□□□□□ -0.61
PKNOX1-205ENST00000474336 SCAPERQ9BY12 1400 aa11.25□□□□□ -0.61
PKNOX1-205ENST00000474336 ADGRL2O95490 1459 aa11.25□□□□□ -0.61
PKNOX1-205ENST00000474336 ATP7AQ04656 1500 aa11.25□□□□□ -0.61
PKNOX1-205ENST00000474336 ZFYVE16Q7Z3T8 1539 aa11.25□□□□□ -0.61
PKNOX1-205ENST00000474336 HECW2Q9P2P5 1572 aa11.24□□□□□ -0.61
PKNOX1-205ENST00000474336 GPR37O15354 613 aa11.24□□□□□ -0.61
PKNOX1-205ENST00000474336 TSPY4P0CV99 314 aa11.24□□□□□ -0.61
PKNOX1-205ENST00000474336 TSPY10P0CW01 314 aa11.24□□□□□ -0.61
PKNOX1-205ENST00000474336 SNRPBP14678 240 aaKnown RBP11.24□□□□□ -0.61
PKNOX1-205ENST00000474336 Q3C1V9 767 aa11.24□□□□□ -0.61
PKNOX1-205ENST00000474336 MRGPRX2Q96LB1 330 aa11.24□□□□□ -0.61
PKNOX1-205ENST00000474336 ANKRD30AQ9BXX3 1397 aa11.24□□□□□ -0.61
PKNOX1-205ENST00000474336 NAIPQ13075 1403 aa11.24□□□□□ -0.61
PKNOX1-205ENST00000474336 TRAPPC8Q9Y2L5 1435 aa11.24□□□□□ -0.61
PKNOX1-205ENST00000474336 MMP16P51512 607 aa11.23□□□□□ -0.61
PKNOX1-205ENST00000474336 PHOX2BQ99453 314 aa11.23□□□□□ -0.61
PKNOX1-205ENST00000474336 ROCK1Q13464 1354 aa11.23□□□□□ -0.61
PKNOX1-205ENST00000474336 ZNF518AQ6AHZ1 1483 aa11.23□□□□□ -0.61
PKNOX1-205ENST00000474336 KIDINS220Q9ULH0 1771 aa11.23□□□□□ -0.61
PKNOX1-205ENST00000474336 J3QL48 77 aa11.22□□□□□ -0.61
PKNOX1-205ENST00000474336 TERTO14746 1132 aaKnown RBP11.22□□□□□ -0.61
PKNOX1-205ENST00000474336 TRIM47Q96LD4 638 aa11.22□□□□□ -0.61
PKNOX1-205ENST00000474336 KDM5CP41229 1560 aa11.21□□□□□ -0.61
PKNOX1-205ENST00000474336 POGZQ7Z3K3 1410 aa11.21□□□□□ -0.61
PKNOX1-205ENST00000474336 CCER1Q8TC90 406 aaPredicted RBP11.21□□□□□ -0.61
PKNOX1-205ENST00000474336 ABCA6Q8N139 1617 aa11.2□□□□□ -0.62
PKNOX1-205ENST00000474336 FRMPD1Q5SYB0 1578 aa11.2□□□□□ -0.62
PKNOX1-205ENST00000474336 DENND4BO75064 1496 aaPredicted RBP11.2□□□□□ -0.62
PKNOX1-205ENST00000474336 KIF15Q9NS87 1388 aa11.2□□□□□ -0.62
PKNOX1-205ENST00000474336 REPIN1Q9BWE0 567 aaKnown RBP11.2□□□□□ -0.62
PKNOX1-205ENST00000474336 NCOA1Q15788 1441 aa11.19□□□□□ -0.62
PKNOX1-205ENST00000474336 SPAG9O60271 1321 aaKnown RBP11.19□□□□□ -0.62
PKNOX1-205ENST00000474336 KIFC2Q96AC6 838 aa11.19□□□□□ -0.62
PKNOX1-205ENST00000474336 DUOX2Q9NRD8 1548 aa11.19□□□□□ -0.62
PKNOX1-205ENST00000474336 LCE2CQ5TA81 110 aa11.18□□□□□ -0.62
PKNOX1-205ENST00000474336 AFAP1Q8N556 730 aa11.17□□□□□ -0.62
PKNOX1-205ENST00000474336 HPS1Q92902 700 aa11.17□□□□□ -0.62
PKNOX1-205ENST00000474336 USB1Q9BQ65 265 aaKnown RBP11.17□□□□□ -0.62
PKNOX1-205ENST00000474336 ANKRD50Q9ULJ7 1429 aa11.17□□□□□ -0.62
PKNOX1-205ENST00000474336 EIF2AK4Q9P2K8 1649 aaKnown RBP11.17□□□□□ -0.62
PKNOX1-205ENST00000474336 ZMYM4Q5VZL5 1548 aa11.16□□□□□ -0.62
PKNOX1-205ENST00000474336 DXOO77932 396 aaKnown RBP11.16□□□□□ -0.62
PKNOX1-205ENST00000474336 RTEL1-TNFRSF6BF6WH68 1400 aa11.16□□□□□ -0.62
PKNOX1-205ENST00000474336 UNC13BO14795 1591 aa11.16□□□□□ -0.62
PKNOX1-205ENST00000474336 DIP2CQ9Y2E4 1556 aa11.16□□□□□ -0.62
PKNOX1-205ENST00000474336 TRIM52Q96A61 297 aa11.15□□□□□ -0.62
PKNOX1-205ENST00000474336 RAPGEF3O95398 923 aa11.14□□□□□ -0.63
PKNOX1-205ENST00000474336 RC3H1Q5TC82 1133 aaKnown RBP11.14□□□□□ -0.63
PKNOX1-205ENST00000474336 ERBINQ96RT1 1412 aa11.14□□□□□ -0.63
PKNOX1-205ENST00000474336 DHX57Q6P158 1386 aaKnown RBP11.14□□□□□ -0.63
PKNOX1-205ENST00000474336 MLH3Q9UHC1 1453 aa11.13□□□□□ -0.63
PKNOX1-205ENST00000474336 CD46P15529 392 aa11.13□□□□□ -0.63
PKNOX1-205ENST00000474336 CCDC24Q8N4L8 307 aa11.13□□□□□ -0.63
PKNOX1-205ENST00000474336 DEPDC5O75140 1603 aa11.13□□□□□ -0.63
PKNOX1-205ENST00000474336 CEP152O94986 1710 aa11.12□□□□□ -0.63
Retrieved 100 of 20,778 RNA–protein pairs in 25.3 ms