RNA–Protein interactions for RNA: ENST00000474309.1

EXOSC1-207, Transcript of exosome component 1, humanhuman

TSL 5

Gene EXOSC1, Length 260 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
EXOSC1-207ENST00000474309 PEAK1Q9H792 1746 aa16.56■□□□□ 0.24
EXOSC1-207ENST00000474309 TTC21BQ7Z4L5 1316 aa16.55■□□□□ 0.24
EXOSC1-207ENST00000474309 TTC21AQ8NDW8 1320 aa16.55■□□□□ 0.24
EXOSC1-207ENST00000474309 CARD10Q9BWT7 1032 aa16.55■□□□□ 0.24
EXOSC1-207ENST00000474309 PPP1R1BQ9UD71 204 aaPredicted RBP16.55■□□□□ 0.24
EXOSC1-207ENST00000474309 QRICH2Q9H0J4 1663 aa16.55■□□□□ 0.24
EXOSC1-207ENST00000474309 DCAF8L1A6NGE4 600 aa16.54■□□□□ 0.24
EXOSC1-207ENST00000474309 MARCH10Q8NA82 808 aaPredicted RBP16.54■□□□□ 0.24
EXOSC1-207ENST00000474309 RGPD3A6NKT7 1758 aaPredicted RBP16.54■□□□□ 0.24
EXOSC1-207ENST00000474309 RGPD4Q7Z3J3 1758 aa16.54■□□□□ 0.24
EXOSC1-207ENST00000474309 EXOC5O00471 708 aa16.53■□□□□ 0.24
EXOSC1-207ENST00000474309 YY1P25490 414 aa16.53■□□□□ 0.24
EXOSC1-207ENST00000474309 PROM2Q8N271 834 aa16.53■□□□□ 0.24
EXOSC1-207ENST00000474309 NINLQ9Y2I6 1382 aa16.52■□□□□ 0.24
EXOSC1-207ENST00000474309 CPSF1Q10570 1443 aaKnown RBP16.52■□□□□ 0.23
EXOSC1-207ENST00000474309 PIK3C2AO00443 1686 aa16.5■□□□□ 0.23
EXOSC1-207ENST00000474309 LRRC37A3O60309 1634 aa16.5■□□□□ 0.23
EXOSC1-207ENST00000474309 TRPM1Q7Z4N2 1603 aa16.5■□□□□ 0.23
EXOSC1-207ENST00000474309 CSB-PGBD3P0DP91 1061 aa16.5■□□□□ 0.23
EXOSC1-207ENST00000474309 PTF1AQ7RTS3 328 aa16.5■□□□□ 0.23
EXOSC1-207ENST00000474309 ANO8Q9HCE9 1232 aaPredicted RBP16.49■□□□□ 0.23
EXOSC1-207ENST00000474309 CCDC7Q96M83 1385 aa16.49■□□□□ 0.23
EXOSC1-207ENST00000474309 RGPD5Q99666 1765 aa16.49■□□□□ 0.23
EXOSC1-207ENST00000474309 ROCK2O75116 1388 aaKnown RBP16.48■□□□□ 0.23
EXOSC1-207ENST00000474309 AKAP12Q02952 1782 aa16.47■□□□□ 0.23
EXOSC1-207ENST00000474309 TXNRD1Q16881 649 aa16.47■□□□□ 0.23
EXOSC1-207ENST00000474309 SIN3AQ96ST3 1273 aa16.47■□□□□ 0.23
EXOSC1-207ENST00000474309 KTN1Q86UP2 1357 aaKnown RBP16.47■□□□□ 0.23
EXOSC1-207ENST00000474309 SLC15A2Q16348 729 aa16.46■□□□□ 0.23
EXOSC1-207ENST00000474309 STK32BQ9NY57 414 aa16.46■□□□□ 0.23
EXOSC1-207ENST00000474309 WNK3Q9BYP7 1800 aa16.46■□□□□ 0.23
EXOSC1-207ENST00000474309 USP31Q70CQ4 1352 aa16.46■□□□□ 0.23
EXOSC1-207ENST00000474309 KAT6BQ8WYB5 2073 aa16.46■□□□□ 0.22
EXOSC1-207ENST00000474309 ABCC6O95255 1503 aa16.45■□□□□ 0.22
EXOSC1-207ENST00000474309 SOX12O15370 315 aa16.45■□□□□ 0.22
EXOSC1-207ENST00000474309 SBNO2Q9Y2G9 1366 aa16.44■□□□□ 0.22
EXOSC1-207ENST00000474309 PDGFDQ9GZP0 370 aaPredicted RBP16.44■□□□□ 0.22
EXOSC1-207ENST00000474309 CASZ1Q86V15 1759 aa16.43■□□□□ 0.22
EXOSC1-207ENST00000474309 PTGER2P43116 358 aa16.43■□□□□ 0.22
EXOSC1-207ENST00000474309 NEUROD1Q13562 356 aa16.43■□□□□ 0.22
EXOSC1-207ENST00000474309 NFAT5O94916 1531 aa16.43■□□□□ 0.22
EXOSC1-207ENST00000474309 ZBTB7AO95365 584 aa16.42■□□□□ 0.22
EXOSC1-207ENST00000474309 SUGP2Q8IX01 1082 aaKnown RBP eCLIP16.41■□□□□ 0.22
EXOSC1-207ENST00000474309 PUS7Q96PZ0 661 aaKnown RBP16.41■□□□□ 0.22
EXOSC1-207ENST00000474309 ATF5Q9Y2D1 282 aaPredicted RBP16.41■□□□□ 0.22
EXOSC1-207ENST00000474309 ERBB3P21860 1342 aa16.41■□□□□ 0.22
EXOSC1-207ENST00000474309 TNS2Q63HR2 1409 aa16.4■□□□□ 0.22
EXOSC1-207ENST00000474309 IL2RBP14784 551 aa16.4■□□□□ 0.22
EXOSC1-207ENST00000474309 MTFR1LQ9H019 292 aa16.4■□□□□ 0.22
EXOSC1-207ENST00000474309 NLRP2Q9NX02 1062 aa16.4■□□□□ 0.22
EXOSC1-207ENST00000474309 HDGFL2Q7Z4V5 671 aaPredicted RBP16.39■□□□□ 0.21
EXOSC1-207ENST00000474309 SYT17Q9BSW7 474 aa16.39■□□□□ 0.21
EXOSC1-207ENST00000474309 NME9Q86XW9 330 aa16.38■□□□□ 0.21
EXOSC1-207ENST00000474309 SGIP1Q9BQI5 828 aa16.38■□□□□ 0.21
EXOSC1-207ENST00000474309 MON2Q7Z3U7 1717 aa16.38■□□□□ 0.21
EXOSC1-207ENST00000474309 USP54Q70EL1 1684 aa16.37■□□□□ 0.21
EXOSC1-207ENST00000474309 ANKRD24Q8TF21 1146 aa16.37■□□□□ 0.21
EXOSC1-207ENST00000474309 ACSBG1Q96GR2 724 aa16.37■□□□□ 0.21
EXOSC1-207ENST00000474309 CARD11Q9BXL7 1154 aa16.37■□□□□ 0.21
EXOSC1-207ENST00000474309 SLC12A5Q9H2X9 1139 aa16.37■□□□□ 0.21
EXOSC1-207ENST00000474309 TMC1Q8TDI8 760 aa16.36■□□□□ 0.21
EXOSC1-207ENST00000474309 TERF2IPQ9NYB0 399 aa16.36■□□□□ 0.21
EXOSC1-207ENST00000474309 CD163L1Q9NR16 1453 aa16.35■□□□□ 0.21
EXOSC1-207ENST00000474309 IP6K1Q92551 441 aa16.35■□□□□ 0.21
EXOSC1-207ENST00000474309 FHDC1Q9C0D6 1143 aaPredicted RBP16.35■□□□□ 0.21
EXOSC1-207ENST00000474309 EDC4Q6P2E9 1401 aaKnown RBP16.35■□□□□ 0.21
EXOSC1-207ENST00000474309 NHSQ6T4R5 1651 aa16.34■□□□□ 0.21
EXOSC1-207ENST00000474309 SLC24A1O60721 1099 aa16.33■□□□□ 0.2
EXOSC1-207ENST00000474309 SLC16A10Q8TF71 515 aa16.33■□□□□ 0.2
EXOSC1-207ENST00000474309 ARXQ96QS3 562 aa16.33■□□□□ 0.2
EXOSC1-207ENST00000474309 LTN1O94822 1766 aa16.32■□□□□ 0.2
EXOSC1-207ENST00000474309 MYOM1P52179 1685 aa16.32■□□□□ 0.2
EXOSC1-207ENST00000474309 CHD4Q14839 1912 aa16.32■□□□□ 0.2
EXOSC1-207ENST00000474309 SLC27A3Q5K4L6 730 aa16.32■□□□□ 0.2
EXOSC1-207ENST00000474309 MAP3K5Q99683 1374 aa16.31■□□□□ 0.2
EXOSC1-207ENST00000474309 ZNF784Q8NCA9 323 aaPredicted RBP16.31■□□□□ 0.2
EXOSC1-207ENST00000474309 LRRC4BQ9NT99 713 aa16.31■□□□□ 0.2
EXOSC1-207ENST00000474309 AKT1S1Q96B36 256 aa16.3■□□□□ 0.2
EXOSC1-207ENST00000474309 BTAF1O14981 1849 aa16.3■□□□□ 0.2
EXOSC1-207ENST00000474309 A0A1W2PP64 1363 aa16.28■□□□□ 0.2
EXOSC1-207ENST00000474309 PAPPAQ13219 1627 aa16.28■□□□□ 0.2
EXOSC1-207ENST00000474309 ZNF827Q17R98 1081 aa16.28■□□□□ 0.2
EXOSC1-207ENST00000474309 DDX54Q8TDD1 881 aaKnown RBP16.28■□□□□ 0.2
EXOSC1-207ENST00000474309 COG3Q96JB2 828 aa16.27■□□□□ 0.2
EXOSC1-207ENST00000474309 UTRNP46939 3433 aa16.26■□□□□ 0.19
EXOSC1-207ENST00000474309 HOXC9P31274 260 aa16.25■□□□□ 0.19
EXOSC1-207ENST00000474309 LTV1Q96GA3 475 aaPredicted RBP16.25■□□□□ 0.19
EXOSC1-207ENST00000474309 TESK2Q96S53 571 aa16.25■□□□□ 0.19
EXOSC1-207ENST00000474309 MAP3K19Q56UN5 1328 aa16.24■□□□□ 0.19
EXOSC1-207ENST00000474309 POLD1P28340 1107 aa16.24■□□□□ 0.19
EXOSC1-207ENST00000474309 AMPHP49418 695 aa16.24■□□□□ 0.19
EXOSC1-207ENST00000474309 PRIM1P49642 420 aaKnown RBP16.24■□□□□ 0.19
EXOSC1-207ENST00000474309 ZCRB1Q8TBF4 217 aaKnown RBP16.24■□□□□ 0.19
EXOSC1-207ENST00000474309 TONSLQ96HA7 1378 aa16.24■□□□□ 0.19
EXOSC1-207ENST00000474309 FAM208AQ9UK61 1670 aaKnown RBP16.24■□□□□ 0.19
EXOSC1-207ENST00000474309 QSER1Q2KHR3 1735 aa16.23■□□□□ 0.19
EXOSC1-207ENST00000474309 HMGB2P26583 209 aaKnown RBP16.23■□□□□ 0.19
EXOSC1-207ENST00000474309 TFCP2L1Q9NZI6 479 aa16.23■□□□□ 0.19
EXOSC1-207ENST00000474309 ANKRD36BQ8N2N9 1353 aa16.23■□□□□ 0.19
EXOSC1-207ENST00000474309 PNPLA7Q6ZV29 1317 aa16.22■□□□□ 0.19
Retrieved 100 of 20,778 RNA–protein pairs in 13.2 ms