RNA–Protein interactions for RNA: ENST00000474202.1

LRRK2-205, Transcript of leucine rich repeat kinase 2, humanhuman

TSL 4

Gene LRRK2, Length 556 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LRRK2-205ENST00000474202 NBPF20Q3BBV1 942 aa12.75□□□□□ -0.37
LRRK2-205ENST00000474202 ZNF330Q9Y3S2 320 aaPredicted RBP12.75□□□□□ -0.37
LRRK2-205ENST00000474202 FSHRP23945 695 aa12.74□□□□□ -0.37
LRRK2-205ENST00000474202 GRM5P41594 1212 aa12.74□□□□□ -0.37
LRRK2-205ENST00000474202 DZIP3Q86Y13 1208 aaKnown RBP12.74□□□□□ -0.37
LRRK2-205ENST00000474202 CAPN5O15484 640 aaPredicted RBP12.73□□□□□ -0.37
LRRK2-205ENST00000474202 RAD21O60216 631 aa12.73□□□□□ -0.37
LRRK2-205ENST00000474202 WDR4P57081 412 aaKnown RBP12.71□□□□□ -0.37
LRRK2-205ENST00000474202 KCTD15Q96SI1 283 aaPredicted RBP12.71□□□□□ -0.37
LRRK2-205ENST00000474202 DHX9Q08211 1270 aaKnown RBP12.7□□□□□ -0.38
LRRK2-205ENST00000474202 CLUAP1Q96AJ1 413 aa12.7□□□□□ -0.38
LRRK2-205ENST00000474202 PCDHB9Q9Y5E1 797 aa12.7□□□□□ -0.38
LRRK2-205ENST00000474202 MCCD1P59942 119 aaPredicted RBP12.69□□□□□ -0.38
LRRK2-205ENST00000474202 VAC14Q08AM6 782 aa12.69□□□□□ -0.38
LRRK2-205ENST00000474202 ZNF787Q6DD87 383 aa12.69□□□□□ -0.38
LRRK2-205ENST00000474202 CCDC116Q8IYX3 515 aa12.69□□□□□ -0.38
LRRK2-205ENST00000474202 EMILIN1Q9Y6C2 1016 aa12.69□□□□□ -0.38
LRRK2-205ENST00000474202 NR3C2P08235 984 aa12.68□□□□□ -0.38
LRRK2-205ENST00000474202 TRIM52Q96A61 297 aa12.68□□□□□ -0.38
LRRK2-205ENST00000474202 ZIC2O95409 532 aaPredicted RBP12.67□□□□□ -0.38
LRRK2-205ENST00000474202 TIMP2P16035 220 aa12.67□□□□□ -0.38
LRRK2-205ENST00000474202 WASHC4Q2M389 1173 aa12.67□□□□□ -0.38
LRRK2-205ENST00000474202 ATP13A2Q9NQ11 1180 aa12.67□□□□□ -0.38
LRRK2-205ENST00000474202 SENP2Q9HC62 589 aa12.66□□□□□ -0.38
LRRK2-205ENST00000474202 PGPEP1Q9NXJ5 209 aa12.66□□□□□ -0.38
LRRK2-205ENST00000474202 WWC1Q8IX03 1113 aa12.65□□□□□ -0.38
LRRK2-205ENST00000474202 KLF16Q9BXK1 252 aaPredicted RBP12.65□□□□□ -0.38
LRRK2-205ENST00000474202 DACH1Q9UI36 760 aa12.64□□□□□ -0.39
LRRK2-205ENST00000474202 EIF4G2P78344 907 aaKnown RBP eCLIP12.63□□□□□ -0.39
LRRK2-205ENST00000474202 INTS6LQ5JSJ4 861 aaKnown RBP12.63□□□□□ -0.39
LRRK2-205ENST00000474202 SEPT12Q8IYM1 358 aa12.63□□□□□ -0.39
LRRK2-205ENST00000474202 ITPKCQ96DU7 683 aa12.63□□□□□ -0.39
LRRK2-205ENST00000474202 A6NJR5 290 aa12.62□□□□□ -0.39
LRRK2-205ENST00000474202 PPP1R26Q5T8A7 1209 aaPredicted RBP12.62□□□□□ -0.39
LRRK2-205ENST00000474202 PROSER2Q86WR7 435 aaPredicted RBP12.62□□□□□ -0.39
LRRK2-205ENST00000474202 CCDC125Q86Z20 511 aa12.62□□□□□ -0.39
LRRK2-205ENST00000474202 KIFC2Q96AC6 838 aa12.62□□□□□ -0.39
LRRK2-205ENST00000474202 ESPNB1AK53 854 aa12.61□□□□□ -0.39
LRRK2-205ENST00000474202 UPP2O95045 317 aa12.61□□□□□ -0.39
LRRK2-205ENST00000474202 SCARF1Q14162 830 aa12.61□□□□□ -0.39
LRRK2-205ENST00000474202 FNBP4Q8N3X1 1017 aaPredicted RBP12.61□□□□□ -0.39
LRRK2-205ENST00000474202 GMPR2Q9P2T1 348 aaKnown RBP12.61□□□□□ -0.39
LRRK2-205ENST00000474202 C11orf95C9JLR9 678 aaPredicted RBP12.6□□□□□ -0.39
LRRK2-205ENST00000474202 GIGYF1O75420 1035 aaPredicted RBP12.6□□□□□ -0.39
LRRK2-205ENST00000474202 RNF20Q5VTR2 975 aa12.6□□□□□ -0.39
LRRK2-205ENST00000474202 ZFAND3Q9H8U3 227 aa12.6□□□□□ -0.39
LRRK2-205ENST00000474202 MRPL14Q6P1L8 145 aaKnown RBP12.59□□□□□ -0.39
LRRK2-205ENST00000474202 BMP1P13497 986 aa12.58□□□□□ -0.4
LRRK2-205ENST00000474202 RAB15P59190 212 aa12.58□□□□□ -0.4
LRRK2-205ENST00000474202 POM121CA8CG34 1229 aa12.57□□□□□ -0.4
LRRK2-205ENST00000474202 SOX11P35716 441 aa12.57□□□□□ -0.4
LRRK2-205ENST00000474202 TRIM47Q96LD4 638 aa12.57□□□□□ -0.4
LRRK2-205ENST00000474202 CEP126Q9P2H0 1117 aa12.57□□□□□ -0.4
LRRK2-205ENST00000474202 TRIM46Q7Z4K8 759 aa12.56□□□□□ -0.4
LRRK2-205ENST00000474202 POTECB2RU33 542 aa12.55□□□□□ -0.4
LRRK2-205ENST00000474202 SEMA3FQ13275 785 aa12.55□□□□□ -0.4
LRRK2-205ENST00000474202 MEIOBQ8N635 442 aa12.55□□□□□ -0.4
LRRK2-205ENST00000474202 ERVH48-1M5A8F1 160 aa12.54□□□□□ -0.4
LRRK2-205ENST00000474202 TSEN34Q9BSV6 310 aaKnown RBP12.54□□□□□ -0.4
LRRK2-205ENST00000474202 ALG2Q9H553 416 aa12.53□□□□□ -0.4
LRRK2-205ENST00000474202 LINC00528Q8N1L1 170 aa12.52□□□□□ -0.41
LRRK2-205ENST00000474202 ZFP42Q96MM3 310 aa12.52□□□□□ -0.41
LRRK2-205ENST00000474202 PURBQ96QR8 312 aaKnown RBP12.52□□□□□ -0.41
LRRK2-205ENST00000474202 TMPRSS4Q9NRS4 437 aa12.52□□□□□ -0.41
LRRK2-205ENST00000474202 BMP2P12643 396 aa12.51□□□□□ -0.41
LRRK2-205ENST00000474202 Q6ZVU0 165 aa12.51□□□□□ -0.41
LRRK2-205ENST00000474202 ADAMTS19Q8TE59 1207 aa12.51□□□□□ -0.41
LRRK2-205ENST00000474202 ZNF784Q8NCA9 323 aaPredicted RBP12.5□□□□□ -0.41
LRRK2-205ENST00000474202 ZMYND15Q9H091 742 aa12.5□□□□□ -0.41
LRRK2-205ENST00000474202 TRAK2O60296 914 aa12.49□□□□□ -0.41
LRRK2-205ENST00000474202 C6orf118Q5T5N4 469 aa12.49□□□□□ -0.41
LRRK2-205ENST00000474202 PHTF2Q8N3S3 785 aa12.49□□□□□ -0.41
LRRK2-205ENST00000474202 CBLBQ13191 982 aa12.48□□□□□ -0.41
LRRK2-205ENST00000474202 SLFNL1Q499Z3 407 aa12.48□□□□□ -0.41
LRRK2-205ENST00000474202 ESF1Q9H501 851 aaKnown RBP12.48□□□□□ -0.41
LRRK2-205ENST00000474202 SNRPBP14678 240 aaKnown RBP12.47□□□□□ -0.41
LRRK2-205ENST00000474202 RNF135Q8IUD6 432 aa12.47□□□□□ -0.41
LRRK2-205ENST00000474202 CCDC85AQ96PX6 553 aaPredicted RBP12.47□□□□□ -0.41
LRRK2-205ENST00000474202 PCDHB11Q9Y5F2 797 aa12.47□□□□□ -0.41
LRRK2-205ENST00000474202 LILRA1O75019 489 aa12.46□□□□□ -0.41
LRRK2-205ENST00000474202 HDGFL1Q5TGJ6 251 aa12.46□□□□□ -0.41
LRRK2-205ENST00000474202 CYLDQ9NQC7 956 aa12.46□□□□□ -0.41
LRRK2-205ENST00000474202 C14orf37Q86TY3 774 aa12.45□□□□□ -0.42
LRRK2-205ENST00000474202 GLMNQ92990 594 aa12.45□□□□□ -0.42
LRRK2-205ENST00000474202 PIK3CDO00329 1044 aa12.44□□□□□ -0.42
LRRK2-205ENST00000474202 ADH1AP07327 375 aa12.44□□□□□ -0.42
LRRK2-205ENST00000474202 TSGA10IPQ3SY00 556 aa12.43□□□□□ -0.42
LRRK2-205ENST00000474202 CC2D2BQ6DHV5 1058 aa12.43□□□□□ -0.42
LRRK2-205ENST00000474202 CHIC2Q9UKJ5 165 aa12.43□□□□□ -0.42
LRRK2-205ENST00000474202 ADD1P35611 737 aaKnown RBP12.42□□□□□ -0.42
LRRK2-205ENST00000474202 ERVK-9P63128 1117 aa12.42□□□□□ -0.42
LRRK2-205ENST00000474202 RELBQ01201 579 aa12.42□□□□□ -0.42
LRRK2-205ENST00000474202 CDCA7Q9BWT1 371 aaPredicted RBP12.42□□□□□ -0.42
LRRK2-205ENST00000474202 SPINT1O43278 529 aa12.41□□□□□ -0.42
LRRK2-205ENST00000474202 MAN1A2O60476 641 aa12.41□□□□□ -0.42
LRRK2-205ENST00000474202 SCTRP47872 440 aa12.41□□□□□ -0.42
LRRK2-205ENST00000474202 ZNF777Q9ULD5 760 aaPredicted RBP12.41□□□□□ -0.42
LRRK2-205ENST00000474202 DOLKQ9UPQ8 538 aa12.41□□□□□ -0.42
LRRK2-205ENST00000474202 MYCP01106 439 aaPredicted RBP12.4□□□□□ -0.42
LRRK2-205ENST00000474202 PLPP7Q8NBV4 271 aa12.4□□□□□ -0.42
Retrieved 100 of 20,778 RNA–protein pairs in 16.6 ms