RNA–Protein interactions for RNA: ENST00000473371.1

NHLRC3-204, Transcript of NHL repeat containing 3, humanhuman

TSL 2

Gene NHLRC3, Length 3,237 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NHLRC3-204ENST00000473371 GOLGA6L22H0YM25 854 aa17.7■□□□□ 0.42
NHLRC3-204ENST00000473371 ARHGAP45Q92619 1136 aa17.7■□□□□ 0.42
NHLRC3-204ENST00000473371 SSFA2P28290 1259 aa17.7■□□□□ 0.42
NHLRC3-204ENST00000473371 THUMPD2Q9BTF0 503 aaKnown RBP17.7■□□□□ 0.42
NHLRC3-204ENST00000473371 CD163L1Q9NR16 1453 aa17.7■□□□□ 0.42
NHLRC3-204ENST00000473371 ELL2O00472 640 aaPredicted RBP17.69■□□□□ 0.42
NHLRC3-204ENST00000473371 ZFYVE9O95405 1425 aa17.69■□□□□ 0.42
NHLRC3-204ENST00000473371 CDC45O75419 566 aa17.69■□□□□ 0.42
NHLRC3-204ENST00000473371 GAS2L2Q8NHY3 880 aa17.69■□□□□ 0.42
NHLRC3-204ENST00000473371 CALD1Q05682 793 aaKnown RBP17.68■□□□□ 0.42
NHLRC3-204ENST00000473371 NFE2L2Q16236 605 aa17.68■□□□□ 0.42
NHLRC3-204ENST00000473371 HMOX1P09601 288 aa17.68■□□□□ 0.42
NHLRC3-204ENST00000473371 TSPYL6Q8N831 410 aa17.68■□□□□ 0.42
NHLRC3-204ENST00000473371 FAM135BQ49AJ0 1406 aa17.68■□□□□ 0.42
NHLRC3-204ENST00000473371 SIRT2Q8IXJ6 389 aa17.68■□□□□ 0.42
NHLRC3-204ENST00000473371 CABP1Q9NZU7 370 aa17.68■□□□□ 0.42
NHLRC3-204ENST00000473371 PTCH1Q13635 1447 aa17.67■□□□□ 0.42
NHLRC3-204ENST00000473371 SUGP2Q8IX01 1082 aaKnown RBP eCLIP17.67■□□□□ 0.42
NHLRC3-204ENST00000473371 PIK3R4Q99570 1358 aa17.67■□□□□ 0.42
NHLRC3-204ENST00000473371 FBLN1P23142 703 aa17.67■□□□□ 0.42
NHLRC3-204ENST00000473371 GNAI1P63096 354 aa17.67■□□□□ 0.42
NHLRC3-204ENST00000473371 PHACTR3Q96KR7 559 aa17.67■□□□□ 0.42
NHLRC3-204ENST00000473371 CDK19Q9BWU1 502 aa17.67■□□□□ 0.42
NHLRC3-204ENST00000473371 PTPRMP28827 1452 aa17.67■□□□□ 0.42
NHLRC3-204ENST00000473371 NPM1P06748 294 aaKnown RBP eCLIP17.66■□□□□ 0.42
NHLRC3-204ENST00000473371 POLKQ9UBT6 870 aa17.65■□□□□ 0.42
NHLRC3-204ENST00000473371 DDX49Q9Y6V7 483 aaKnown RBP17.65■□□□□ 0.42
NHLRC3-204ENST00000473371 ABCC4O15439 1325 aa17.65■□□□□ 0.42
NHLRC3-204ENST00000473371 HSP90AA2PQ14568 343 aaPredicted RBP17.64■□□□□ 0.42
NHLRC3-204ENST00000473371 GLIPR1L2Q4G1C9 344 aa17.64■□□□□ 0.42
NHLRC3-204ENST00000473371 IFT57Q9NWB7 429 aa17.64■□□□□ 0.42
NHLRC3-204ENST00000473371 CDC42BPGQ6DT37 1551 aa17.64■□□□□ 0.41
NHLRC3-204ENST00000473371 YTHDC2Q9H6S0 1430 aaKnown RBP17.64■□□□□ 0.41
NHLRC3-204ENST00000473371 BAG4O95429 457 aaKnown RBP17.64■□□□□ 0.41
NHLRC3-204ENST00000473371 SLC52A1Q9NWF4 448 aa17.64■□□□□ 0.41
NHLRC3-204ENST00000473371 TWISTNBQ3B726 338 aaPredicted RBP17.64■□□□□ 0.41
NHLRC3-204ENST00000473371 MBIPQ9NS73 344 aa17.64■□□□□ 0.41
NHLRC3-204ENST00000473371 KIF20BQ96Q89 1820 aa17.63■□□□□ 0.41
NHLRC3-204ENST00000473371 CCDC173Q0VFZ6 552 aa17.63■□□□□ 0.41
NHLRC3-204ENST00000473371 ANP32BQ92688 251 aaKnown RBP17.63■□□□□ 0.41
NHLRC3-204ENST00000473371 NASPP49321 788 aaPredicted RBP17.63■□□□□ 0.41
NHLRC3-204ENST00000473371 API5Q9BZZ5 524 aaKnown RBP17.63■□□□□ 0.41
NHLRC3-204ENST00000473371 CLTCQ00610 1675 aaKnown RBP17.62■□□□□ 0.41
NHLRC3-204ENST00000473371 GSPT1P15170 499 aaKnown RBP17.62■□□□□ 0.41
NHLRC3-204ENST00000473371 RABEP1Q15276 862 aa17.62■□□□□ 0.41
NHLRC3-204ENST00000473371 KLHL40Q2TBA0 621 aa17.62■□□□□ 0.41
NHLRC3-204ENST00000473371 CLEC17AQ6ZS10 378 aa17.62■□□□□ 0.41
NHLRC3-204ENST00000473371 PLEKHM2Q8IWE5 1019 aa17.61■□□□□ 0.41
NHLRC3-204ENST00000473371 RRP9O43818 475 aaKnown RBP17.61■□□□□ 0.41
NHLRC3-204ENST00000473371 RAPGEF3O95398 923 aa17.61■□□□□ 0.41
NHLRC3-204ENST00000473371 CFAP44Q96MT7 982 aa17.61■□□□□ 0.41
NHLRC3-204ENST00000473371 ZNF853P0CG23 659 aa17.6■□□□□ 0.41
NHLRC3-204ENST00000473371 C8orf58Q8NAV2 365 aa17.6■□□□□ 0.41
NHLRC3-204ENST00000473371 ARHGAP31Q2M1Z3 1444 aa17.59■□□□□ 0.41
NHLRC3-204ENST00000473371 MYO5BQ9ULV0 1848 aa17.59■□□□□ 0.41
NHLRC3-204ENST00000473371 NCLP19338 710 aaKnown RBP17.59■□□□□ 0.41
NHLRC3-204ENST00000473371 MCTP1Q6DN14 999 aa17.59■□□□□ 0.41
NHLRC3-204ENST00000473371 PPP1R9BQ96SB3 815 aa17.59■□□□□ 0.41
NHLRC3-204ENST00000473371 NUCB2P80303 420 aa17.59■□□□□ 0.41
NHLRC3-204ENST00000473371 EMILIN1Q9Y6C2 1016 aa17.59■□□□□ 0.41
NHLRC3-204ENST00000473371 AK9Q5TCS8 1911 aa17.58■□□□□ 0.41
NHLRC3-204ENST00000473371 TTC22Q5TAA0 569 aa17.58■□□□□ 0.41
NHLRC3-204ENST00000473371 IBTKQ9P2D0 1353 aaPredicted RBP17.58■□□□□ 0.4
NHLRC3-204ENST00000473371 DCTPP1Q9H773 170 aa17.58■□□□□ 0.4
NHLRC3-204ENST00000473371 LMOD3Q0VAK6 560 aa17.57■□□□□ 0.4
NHLRC3-204ENST00000473371 ARHGEF40Q8TER5 1519 aa17.57■□□□□ 0.4
NHLRC3-204ENST00000473371 DIP2CQ9Y2E4 1556 aa17.57■□□□□ 0.4
NHLRC3-204ENST00000473371 C16orf71Q8IYS4 520 aaPredicted RBP17.57■□□□□ 0.4
NHLRC3-204ENST00000473371 IL13P35225 146 aa17.56■□□□□ 0.4
NHLRC3-204ENST00000473371 INTS3Q68E01 1043 aaKnown RBP17.56■□□□□ 0.4
NHLRC3-204ENST00000473371 USP26Q9BXU7 913 aa17.56■□□□□ 0.4
NHLRC3-204ENST00000473371 MAP2P11137 1827 aaKnown RBP17.56■□□□□ 0.4
NHLRC3-204ENST00000473371 ZSCAN30Q86W11 494 aa17.56■□□□□ 0.4
NHLRC3-204ENST00000473371 CAVIN1Q6NZI2 390 aaKnown RBP17.55■□□□□ 0.4
NHLRC3-204ENST00000473371 TPM2P07951 284 aa17.55■□□□□ 0.4
NHLRC3-204ENST00000473371 FAM83GA6ND36 823 aa17.54■□□□□ 0.4
NHLRC3-204ENST00000473371 KIF24Q5T7B8 1368 aa17.54■□□□□ 0.4
NHLRC3-204ENST00000473371 TMEM131LA2VDJ0 1609 aa17.54■□□□□ 0.4
NHLRC3-204ENST00000473371 MSNP26038 577 aaKnown RBP17.54■□□□□ 0.4
NHLRC3-204ENST00000473371 CASC1Q6TDU7 716 aa17.54■□□□□ 0.4
NHLRC3-204ENST00000473371 ZNF445P59923 1031 aa17.53■□□□□ 0.4
NHLRC3-204ENST00000473371 STAG3Q9UJ98 1225 aa17.53■□□□□ 0.4
NHLRC3-204ENST00000473371 DCTN1Q14203 1278 aa17.53■□□□□ 0.4
NHLRC3-204ENST00000473371 LMBRD1Q9NUN5 540 aa17.53■□□□□ 0.4
NHLRC3-204ENST00000473371 ALKQ9UM73 1620 aa17.53■□□□□ 0.4
NHLRC3-204ENST00000473371 APBB1O00213 710 aa17.53■□□□□ 0.4
NHLRC3-204ENST00000473371 WAPLQ7Z5K2 1190 aa17.53■□□□□ 0.4
NHLRC3-204ENST00000473371 ANKRD44Q8N8A2 993 aa17.53■□□□□ 0.4
NHLRC3-204ENST00000473371 OTUD7AQ8TE49 926 aaPredicted RBP17.53■□□□□ 0.4
NHLRC3-204ENST00000473371 KNDC1Q76NI1 1749 aa17.52■□□□□ 0.4
NHLRC3-204ENST00000473371 RIMS2Q9UQ26 1411 aa17.52■□□□□ 0.4
NHLRC3-204ENST00000473371 ST18O60284 1047 aa17.52■□□□□ 0.4
NHLRC3-204ENST00000473371 ZSCAN23Q3MJ62 389 aa17.52■□□□□ 0.4
NHLRC3-204ENST00000473371 ATP7BP35670 1465 aa17.52■□□□□ 0.4
NHLRC3-204ENST00000473371 CYP2E1P05181 493 aaPredicted RBP17.52■□□□□ 0.39
NHLRC3-204ENST00000473371 KIAA1211Q6ZU35 1233 aa17.52■□□□□ 0.39
NHLRC3-204ENST00000473371 NME9Q86XW9 330 aa17.52■□□□□ 0.39
NHLRC3-204ENST00000473371 CWC22Q9HCG8 908 aaKnown RBP17.52■□□□□ 0.39
NHLRC3-204ENST00000473371 SDSP20132 328 aa17.51■□□□□ 0.39
NHLRC3-204ENST00000473371 PKP1Q13835 747 aa17.51■□□□□ 0.39
Retrieved 100 of 20,778 RNA–protein pairs in 20.9 ms