RNA–Protein interactions for RNA: ENST00000473062.1

CLCC1-208, Transcript of chloride channel CLIC like 1, humanhuman

TSL 3

Gene CLCC1, Length 319 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLCC1-208ENST00000473062 CCDC82Q8N4S0 544 aa6.52□□□□□ -1.37
CLCC1-208ENST00000473062 SNIP1Q8TAD8 396 aaKnown RBP6.52□□□□□ -1.37
CLCC1-208ENST00000473062 KCTD15Q96SI1 283 aaPredicted RBP6.52□□□□□ -1.37
CLCC1-208ENST00000473062 WASF2Q9Y6W5 498 aa6.52□□□□□ -1.37
CLCC1-208ENST00000473062 TTC24A2A3L6 582 aaPredicted RBP6.51□□□□□ -1.37
CLCC1-208ENST00000473062 ARID3CA6NKF2 412 aa6.51□□□□□ -1.37
CLCC1-208ENST00000473062 ATP9BO43861 1147 aa6.51□□□□□ -1.37
CLCC1-208ENST00000473062 PPP1R15AO75807 674 aaPredicted RBP6.51□□□□□ -1.37
CLCC1-208ENST00000473062 PRR20EP86478 221 aa6.51□□□□□ -1.37
CLCC1-208ENST00000473062 PRR20CP86479 221 aa6.51□□□□□ -1.37
CLCC1-208ENST00000473062 PRR20DP86480 221 aa6.51□□□□□ -1.37
CLCC1-208ENST00000473062 PRR20BP86481 221 aa6.51□□□□□ -1.37
CLCC1-208ENST00000473062 PRR20AP86496 221 aa6.51□□□□□ -1.37
CLCC1-208ENST00000473062 PDE4CQ08493 712 aa6.51□□□□□ -1.37
CLCC1-208ENST00000473062 ARID5BQ14865 1188 aa6.51□□□□□ -1.37
CLCC1-208ENST00000473062 MYCP01106 439 aaPredicted RBP6.5□□□□□ -1.37
CLCC1-208ENST00000473062 FOXC1Q12948 553 aa6.5□□□□□ -1.37
CLCC1-208ENST00000473062 C4orf48Q5BLP8 95 aa6.5□□□□□ -1.37
CLCC1-208ENST00000473062 TRIM50Q86XT4 487 aa6.5□□□□□ -1.37
CLCC1-208ENST00000473062 MRGPRX2Q96LB1 330 aa6.5□□□□□ -1.37
CLCC1-208ENST00000473062 OCSTAMPQ9BR26 566 aa6.5□□□□□ -1.37
CLCC1-208ENST00000473062 PPP1R12CQ9BZL4 782 aa6.5□□□□□ -1.37
CLCC1-208ENST00000473062 PGPEP1Q9NXJ5 209 aa6.5□□□□□ -1.37
CLCC1-208ENST00000473062 DOLKQ9UPQ8 538 aa6.5□□□□□ -1.37
CLCC1-208ENST00000473062 ESPNB1AK53 854 aa6.49□□□□□ -1.37
CLCC1-208ENST00000473062 FSHRP23945 695 aa6.49□□□□□ -1.37
CLCC1-208ENST00000473062 LAPTM4AQ15012 233 aa6.49□□□□□ -1.37
CLCC1-208ENST00000473062 EML3Q32P44 896 aa6.49□□□□□ -1.37
CLCC1-208ENST00000473062 PLEKHM2Q8IWE5 1019 aa6.49□□□□□ -1.37
CLCC1-208ENST00000473062 EMILIN1Q9Y6C2 1016 aa6.49□□□□□ -1.37
CLCC1-208ENST00000473062 ACIN1Q9UKV3 1341 aaKnown RBP6.49□□□□□ -1.37
CLCC1-208ENST00000473062 ALDH1A1P00352 501 aa6.48□□□□□ -1.37
CLCC1-208ENST00000473062 SKIP12755 728 aa6.48□□□□□ -1.37
CLCC1-208ENST00000473062 USP4Q13107 963 aa6.48□□□□□ -1.37
CLCC1-208ENST00000473062 PLPP7Q8NBV4 271 aa6.48□□□□□ -1.37
CLCC1-208ENST00000473062 RBM19Q9Y4C8 960 aaKnown RBP6.48□□□□□ -1.37
CLCC1-208ENST00000473062 PALM3A6NDB9 673 aaPredicted RBP6.47□□□□□ -1.37
CLCC1-208ENST00000473062 USP17L5A8MUK1 530 aa6.47□□□□□ -1.37
CLCC1-208ENST00000473062 ATP5J2-PTCD1G3V325 749 aa6.47□□□□□ -1.37
CLCC1-208ENST00000473062 SIAH2O43255 324 aa6.47□□□□□ -1.37
CLCC1-208ENST00000473062 ATP1A2P50993 1020 aa6.47□□□□□ -1.37
CLCC1-208ENST00000473062 CCDC116Q8IYX3 515 aa6.47□□□□□ -1.37
CLCC1-208ENST00000473062 ADAMTS19Q8TE59 1207 aa6.47□□□□□ -1.37
CLCC1-208ENST00000473062 EMID1Q96A84 441 aaPredicted RBP6.47□□□□□ -1.37
CLCC1-208ENST00000473062 PBXIP1Q96AQ6 731 aa6.47□□□□□ -1.37
CLCC1-208ENST00000473062 NOD1Q9Y239 953 aa6.47□□□□□ -1.37
CLCC1-208ENST00000473062 ARID3AQ99856 593 aa6.46□□□□□ -1.38
CLCC1-208ENST00000473062 PKD2L1Q9P0L9 805 aa6.46□□□□□ -1.38
CLCC1-208ENST00000473062 TFIP11Q9UBB9 837 aaKnown RBP6.46□□□□□ -1.38
CLCC1-208ENST00000473062 PCDHB11Q9Y5F2 797 aa6.46□□□□□ -1.38
CLCC1-208ENST00000473062 MAFBQ9Y5Q3 323 aaPredicted RBP6.46□□□□□ -1.38
CLCC1-208ENST00000473062 TLL2Q9Y6L7 1015 aa6.46□□□□□ -1.38
CLCC1-208ENST00000473062 USP17L3A6NCW0 530 aa6.45□□□□□ -1.38
CLCC1-208ENST00000473062 USP17L4A6NCW7 530 aa6.45□□□□□ -1.38
CLCC1-208ENST00000473062 GIGYF1O75420 1035 aaPredicted RBP6.45□□□□□ -1.38
CLCC1-208ENST00000473062 LMOD1P29536 600 aaPredicted RBP6.45□□□□□ -1.38
CLCC1-208ENST00000473062 MYT1Q01538 1121 aa6.45□□□□□ -1.38
CLCC1-208ENST00000473062 INTS6LQ5JSJ4 861 aaKnown RBP6.45□□□□□ -1.38
CLCC1-208ENST00000473062 USP17L2Q6R6M4 530 aa6.45□□□□□ -1.38
CLCC1-208ENST00000473062 USP17L1Q7RTZ2 530 aa6.45□□□□□ -1.38
CLCC1-208ENST00000473062 CHIC2Q9UKJ5 165 aa6.45□□□□□ -1.38
CLCC1-208ENST00000473062 PDZRN3Q9UPQ7 1066 aa6.45□□□□□ -1.38
CLCC1-208ENST00000473062 GDF9O60383 454 aa6.44□□□□□ -1.38
CLCC1-208ENST00000473062 PHTF2Q8N3S3 785 aa6.44□□□□□ -1.38
CLCC1-208ENST00000473062 UCN2Q96RP3 112 aa6.44□□□□□ -1.38
CLCC1-208ENST00000473062 C1orf115Q9H7X2 142 aa6.44□□□□□ -1.38
CLCC1-208ENST00000473062 VRTNQ9H8Y1 702 aa6.44□□□□□ -1.38
CLCC1-208ENST00000473062 TNFRSF10AO00220 468 aa6.43□□□□□ -1.38
CLCC1-208ENST00000473062 GRM5P41594 1212 aa6.43□□□□□ -1.38
CLCC1-208ENST00000473062 RAB15P59190 212 aa6.43□□□□□ -1.38
CLCC1-208ENST00000473062 NNTQ13423 1086 aa6.43□□□□□ -1.38
CLCC1-208ENST00000473062 OXLD1Q5BKU9 147 aa6.43□□□□□ -1.38
CLCC1-208ENST00000473062 CC2D2BQ6DHV5 1058 aa6.43□□□□□ -1.38
CLCC1-208ENST00000473062 LARP1Q6PKG0 1096 aaKnown RBP6.43□□□□□ -1.38
CLCC1-208ENST00000473062 TBC1D9Q6ZT07 1266 aa6.43□□□□□ -1.38
CLCC1-208ENST00000473062 CYP2U1Q7Z449 544 aa6.43□□□□□ -1.38
CLCC1-208ENST00000473062 ARXQ96QS3 562 aa6.43□□□□□ -1.38
CLCC1-208ENST00000473062 TOR4AQ9NXH8 423 aa6.43□□□□□ -1.38
CLCC1-208ENST00000473062 ERVH48-1M5A8F1 160 aa6.42□□□□□ -1.38
CLCC1-208ENST00000473062 NCOA4Q13772 614 aa6.42□□□□□ -1.38
CLCC1-208ENST00000473062 CFAP70Q5T0N1 1121 aa6.42□□□□□ -1.38
CLCC1-208ENST00000473062 PPP1R26Q5T8A7 1209 aaPredicted RBP6.42□□□□□ -1.38
CLCC1-208ENST00000473062 FAM196BA6NMK8 535 aa6.41□□□□□ -1.38
CLCC1-208ENST00000473062 NRG2O14511 850 aaPredicted RBP6.41□□□□□ -1.38
CLCC1-208ENST00000473062 UPP2O95045 317 aa6.41□□□□□ -1.38
CLCC1-208ENST00000473062 RFX1P22670 979 aa6.41□□□□□ -1.38
CLCC1-208ENST00000473062 ERVK-9P63128 1117 aa6.41□□□□□ -1.38
CLCC1-208ENST00000473062 MKRN1Q9UHC7 482 aaKnown RBP6.41□□□□□ -1.38
CLCC1-208ENST00000473062 PIK3CDO00329 1044 aa6.4□□□□□ -1.38
CLCC1-208ENST00000473062 DGAT1O75907 488 aa6.4□□□□□ -1.38
CLCC1-208ENST00000473062 CSB-PGBD3P0DP91 1061 aa6.4□□□□□ -1.38
CLCC1-208ENST00000473062 PSME1Q06323 249 aa6.4□□□□□ -1.38
CLCC1-208ENST00000473062 CTC1Q2NKJ3 1217 aa6.4□□□□□ -1.38
CLCC1-208ENST00000473062 PKDCCQ504Y2 493 aa6.4□□□□□ -1.38
CLCC1-208ENST00000473062 ESCO1Q5FWF5 840 aa6.4□□□□□ -1.38
CLCC1-208ENST00000473062 TRAF7Q6Q0C0 670 aa6.4□□□□□ -1.38
CLCC1-208ENST00000473062 HOMEZQ8IX15 550 aa6.4□□□□□ -1.38
CLCC1-208ENST00000473062 LARGE2Q8N3Y3 721 aa6.4□□□□□ -1.38
CLCC1-208ENST00000473062 CCDC85AQ96PX6 553 aaPredicted RBP6.4□□□□□ -1.38
CLCC1-208ENST00000473062 ATG7O95352 703 aa6.39□□□□□ -1.39
Retrieved 100 of 20,778 RNA–protein pairs in 18.9 ms