RNA–Protein interactions for RNA: ENST00000472863.5

HOXB3-207, Transcript of homeobox B3, humanhuman

TSL 2 BASIC

Gene HOXB3, Length 1,909 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HOXB3-207ENST00000472863 SOS2Q07890 1332 aaPredicted RBP36.26■■■■□ 3.4
HOXB3-207ENST00000472863 LTN1O94822 1766 aa36.26■■■■□ 3.39
HOXB3-207ENST00000472863 PRKAR2BP31323 418 aa36.26■■■■□ 3.39
HOXB3-207ENST00000472863 PNNQ9H307 717 aaKnown RBP36.26■■■■□ 3.39
HOXB3-207ENST00000472863 ZBTB7CA1YPR0 619 aa36.25■■■■□ 3.39
HOXB3-207ENST00000472863 GTF3C3Q9Y5Q9 886 aa36.25■■■■□ 3.39
HOXB3-207ENST00000472863 NGEFQ8N5V2 710 aa36.24■■■■□ 3.39
HOXB3-207ENST00000472863 MED1Q15648 1581 aaPredicted RBP36.23■■■■□ 3.39
HOXB3-207ENST00000472863 MAPK8IP3Q9UPT6 1336 aa36.23■■■■□ 3.39
HOXB3-207ENST00000472863 ARHGEF25Q86VW2 580 aa36.22■■■■□ 3.39
HOXB3-207ENST00000472863 CABLES1Q8TDN4 633 aa36.22■■■■□ 3.39
HOXB3-207ENST00000472863 IP6K1Q92551 441 aa36.22■■■■□ 3.39
HOXB3-207ENST00000472863 AEBP1Q8IUX7 1158 aa36.2■■■■□ 3.39
HOXB3-207ENST00000472863 WWC1Q8IX03 1113 aa36.2■■■■□ 3.39
HOXB3-207ENST00000472863 SULT6B1Q6IMI4 303 aa36.2■■■■□ 3.39
HOXB3-207ENST00000472863 RTL1A6NKG5 1358 aa36.19■■■■□ 3.38
HOXB3-207ENST00000472863 PHACTR3Q96KR7 559 aa36.19■■■■□ 3.38
HOXB3-207ENST00000472863 TMPOP42166 694 aaKnown RBP36.18■■■■□ 3.38
HOXB3-207ENST00000472863 LTV1Q96GA3 475 aaPredicted RBP36.18■■■■□ 3.38
HOXB3-207ENST00000472863 ARHGEF10O15013 1369 aa36.18■■■■□ 3.38
HOXB3-207ENST00000472863 GOLGA2Q08379 1002 aa36.18■■■■□ 3.38
HOXB3-207ENST00000472863 ZC3H6P61129 1189 aaKnown RBP36.17■■■■□ 3.38
HOXB3-207ENST00000472863 RGPD1P0DJD0 1748 aa36.16■■■■□ 3.38
HOXB3-207ENST00000472863 EYA1Q99502 592 aa36.16■■■■□ 3.38
HOXB3-207ENST00000472863 PHF23Q9BUL5 403 aaPredicted RBP36.16■■■■□ 3.38
HOXB3-207ENST00000472863 NHSL1Q5SYE7 1610 aa36.15■■■■□ 3.38
HOXB3-207ENST00000472863 SUPT16HQ9Y5B9 1047 aaKnown RBP36.14■■■■□ 3.38
HOXB3-207ENST00000472863 NEFMP07197 916 aa36.13■■■■□ 3.37
HOXB3-207ENST00000472863 SPINK5Q9NQ38 1064 aaPredicted RBP36.13■■■■□ 3.37
HOXB3-207ENST00000472863 CCDC27Q2M243 656 aa36.12■■■■□ 3.37
HOXB3-207ENST00000472863 NCBP3Q53F19 620 aaKnown RBP36.12■■■■□ 3.37
HOXB3-207ENST00000472863 PHRF1Q9P1Y6 1649 aaKnown RBP36.11■■■■□ 3.37
HOXB3-207ENST00000472863 ROBO1Q9Y6N7 1651 aa36.11■■■■□ 3.37
HOXB3-207ENST00000472863 RIPK4P57078 832 aa36.1■■■■□ 3.37
HOXB3-207ENST00000472863 IGSF1Q8N6C5 1336 aa36.1■■■■□ 3.37
HOXB3-207ENST00000472863 SLFN5Q08AF3 891 aa36.1■■■■□ 3.37
HOXB3-207ENST00000472863 AXIN2Q9Y2T1 843 aa36.09■■■■□ 3.37
HOXB3-207ENST00000472863 TRIM35Q9UPQ4 493 aa36.08■■■■□ 3.37
HOXB3-207ENST00000472863 CRYBG1Q9Y4K1 1723 aa36.07■■■■□ 3.36
HOXB3-207ENST00000472863 DUSP27Q5VZP5 1158 aa36.06■■■■□ 3.36
HOXB3-207ENST00000472863 NFE2L2Q16236 605 aa36.05■■■■□ 3.36
HOXB3-207ENST00000472863 TRMT2AQ8IZ69 625 aaKnown RBP36.04■■■■□ 3.36
HOXB3-207ENST00000472863 WDR63Q8IWG1 891 aa36.04■■■■□ 3.36
HOXB3-207ENST00000472863 KDRP35968 1356 aa36.03■■■■□ 3.36
HOXB3-207ENST00000472863 E9PSI1 815 aa36.02■■■■□ 3.36
HOXB3-207ENST00000472863 NBPF6Q5VWK0 638 aa36.01■■■■□ 3.36
HOXB3-207ENST00000472863 NBPF4Q96M43 638 aa36.01■■■■□ 3.36
HOXB3-207ENST00000472863 TOM1O60784 492 aa36■■■■□ 3.35
HOXB3-207ENST00000472863 USHBP1Q8N6Y0 703 aa36■■■■□ 3.35
HOXB3-207ENST00000472863 ANKRD24Q8TF21 1146 aa36■■■■□ 3.35
HOXB3-207ENST00000472863 LRRC59Q96AG4 307 aaKnown RBP36■■■■□ 3.35
HOXB3-207ENST00000472863 CHRNA2Q15822 529 aa35.99■■■■□ 3.35
HOXB3-207ENST00000472863 KIAA0232Q92628 1395 aa35.98■■■■□ 3.35
HOXB3-207ENST00000472863 RGPD5Q99666 1765 aa35.98■■■■□ 3.35
HOXB3-207ENST00000472863 PIP4K2BP78356 416 aa35.98■■■■□ 3.35
HOXB3-207ENST00000472863 AHDC1Q5TGY3 1603 aaPredicted RBP35.96■■■■□ 3.35
HOXB3-207ENST00000472863 CPDO75976 1380 aa35.95■■■■□ 3.35
HOXB3-207ENST00000472863 RGPD2P0DJD1 1756 aa35.95■■■■□ 3.35
HOXB3-207ENST00000472863 HAP1P54257 671 aaPredicted RBP35.95■■■■□ 3.34
HOXB3-207ENST00000472863 COL18A1P39060 1754 aa35.94■■■■□ 3.34
HOXB3-207ENST00000472863 RCAN3Q9UKA8 241 aa35.93■■■■□ 3.34
HOXB3-207ENST00000472863 DLG5Q8TDM6 1919 aa35.92■■■■□ 3.34
HOXB3-207ENST00000472863 UBAP1LF5GYI3 381 aa35.91■■■■□ 3.34
HOXB3-207ENST00000472863 ERBB3P21860 1342 aa35.91■■■■□ 3.34
HOXB3-207ENST00000472863 MTHFSDQ2M296 383 aaKnown RBP35.9■■■■□ 3.34
HOXB3-207ENST00000472863 THUMPD2Q9BTF0 503 aaKnown RBP35.9■■■■□ 3.34
HOXB3-207ENST00000472863 ABCA3Q99758 1704 aa35.88■■■■□ 3.33
HOXB3-207ENST00000472863 FAM83GA6ND36 823 aa35.88■■■■□ 3.33
HOXB3-207ENST00000472863 FKBP8Q14318 412 aa35.88■■■■□ 3.33
HOXB3-207ENST00000472863 PRDM11Q9NQV5 511 aa35.88■■■■□ 3.33
HOXB3-207ENST00000472863 NEFLP07196 543 aa35.87■■■■□ 3.33
HOXB3-207ENST00000472863 IRX6P78412 446 aaPredicted RBP35.85■■■■□ 3.33
HOXB3-207ENST00000472863 DCTN1Q14203 1278 aa35.85■■■■□ 3.33
HOXB3-207ENST00000472863 LMOD3Q0VAK6 560 aa35.84■■■■□ 3.33
HOXB3-207ENST00000472863 IL16Q14005 1332 aa35.84■■■■□ 3.33
HOXB3-207ENST00000472863 MYH16Q9H6N6 1097 aa35.83■■■■□ 3.33
HOXB3-207ENST00000472863 PHLPP1O60346 1717 aa35.83■■■■□ 3.33
HOXB3-207ENST00000472863 RNF123Q5XPI4 1314 aa35.83■■■■□ 3.33
HOXB3-207ENST00000472863 TSR2Q969E8 191 aaKnown RBP35.82■■■■□ 3.32
HOXB3-207ENST00000472863 ABCC6O95255 1503 aa35.82■■■■□ 3.32
HOXB3-207ENST00000472863 CERKQ8TCT0 537 aa35.81■■■■□ 3.32
HOXB3-207ENST00000472863 NCAPD2Q15021 1401 aa35.81■■■■□ 3.32
HOXB3-207ENST00000472863 GAS2L2Q8NHY3 880 aa35.81■■■■□ 3.32
HOXB3-207ENST00000472863 NLRP2Q9NX02 1062 aa35.81■■■■□ 3.32
HOXB3-207ENST00000472863 CSB-PGBD3P0DP91 1061 aa35.8■■■■□ 3.32
HOXB3-207ENST00000472863 FANCIQ9NVI1 1328 aa35.78■■■■□ 3.32
HOXB3-207ENST00000472863 COL16A1Q07092 1604 aaPredicted RBP35.78■■■■□ 3.32
HOXB3-207ENST00000472863 MCM10Q7L590 875 aa35.78■■■■□ 3.32
HOXB3-207ENST00000472863 CAMTA1Q9Y6Y1 1673 aa35.78■■■■□ 3.32
HOXB3-207ENST00000472863 LAS1LQ9Y4W2 734 aaKnown RBP35.77■■■■□ 3.32
HOXB3-207ENST00000472863 CALD1Q05682 793 aaKnown RBP35.75■■■■□ 3.31
HOXB3-207ENST00000472863 LMO7Q8WWI1 1683 aa35.74■■■■□ 3.31
HOXB3-207ENST00000472863 COL22A1Q8NFW1 1626 aaPredicted RBP35.73■■■■□ 3.31
HOXB3-207ENST00000472863 RRP1P56182 461 aaKnown RBP35.71■■■■□ 3.31
HOXB3-207ENST00000472863 RTF1Q92541 710 aaKnown RBP35.71■■■■□ 3.31
HOXB3-207ENST00000472863 ZNF853P0CG23 659 aa35.7■■■■□ 3.31
HOXB3-207ENST00000472863 IFT57Q9NWB7 429 aa35.7■■■■□ 3.31
HOXB3-207ENST00000472863 GNAT3A8MTJ3 354 aa35.69■■■■□ 3.3
HOXB3-207ENST00000472863 EXOSC9Q06265 439 aaKnown RBP35.69■■■■□ 3.3
HOXB3-207ENST00000472863 GNAI1P63096 354 aa35.69■■■■□ 3.3
Retrieved 100 of 20,778 RNA–protein pairs in 27 ms