RNA–Protein interactions for RNA: ENST00000472844.1

NUP35-208, Transcript of nucleoporin 35, humanhuman

TSL 3

Gene NUP35, Length 514 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUP35-208ENST00000472844 TMC2Q8TDI7 906 aa8.72□□□□□ -1.01
NUP35-208ENST00000472844 PCDH12Q9NPG4 1184 aa8.72□□□□□ -1.01
NUP35-208ENST00000472844 COLQQ9Y215 455 aaPredicted RBP8.72□□□□□ -1.01
NUP35-208ENST00000472844 ZNF608Q9ULD9 1512 aaPredicted RBP8.71□□□□□ -1.01
NUP35-208ENST00000472844 HSP90AA1P07900 732 aaKnown RBP8.71□□□□□ -1.02
NUP35-208ENST00000472844 SSFA2P28290 1259 aa8.71□□□□□ -1.02
NUP35-208ENST00000472844 PSEN1P49768 467 aa8.71□□□□□ -1.02
NUP35-208ENST00000472844 IER5LQ5T953 404 aa8.71□□□□□ -1.02
NUP35-208ENST00000472844 FILIP1Q7Z7B0 1213 aa8.71□□□□□ -1.02
NUP35-208ENST00000472844 CACTIN-AS1Q8N1I8 211 aa8.71□□□□□ -1.02
NUP35-208ENST00000472844 SWAP70Q9UH65 585 aa8.71□□□□□ -1.02
NUP35-208ENST00000472844 MAFBQ9Y5Q3 323 aaPredicted RBP8.71□□□□□ -1.02
NUP35-208ENST00000472844 NDUFB9Q9Y6M9 179 aa8.71□□□□□ -1.02
NUP35-208ENST00000472844 PRC1O43663 620 aa8.7□□□□□ -1.02
NUP35-208ENST00000472844 SEC24BO95487 1268 aa8.7□□□□□ -1.02
NUP35-208ENST00000472844 SERPINB4P48594 390 aa8.7□□□□□ -1.02
NUP35-208ENST00000472844 ZNF746Q6NUN9 644 aaPredicted RBP8.7□□□□□ -1.02
NUP35-208ENST00000472844 EFCAB3Q8N7B9 438 aa8.7□□□□□ -1.02
NUP35-208ENST00000472844 ALG2Q9H553 416 aa8.7□□□□□ -1.02
NUP35-208ENST00000472844 SPC25Q9HBM1 224 aa8.7□□□□□ -1.02
NUP35-208ENST00000472844 CAPN10Q9HC96 672 aa8.7□□□□□ -1.02
NUP35-208ENST00000472844 FBXO9Q9UK97 447 aaPredicted RBP8.7□□□□□ -1.02
NUP35-208ENST00000472844 PRR12Q9ULL5 1215 aa8.7□□□□□ -1.02
NUP35-208ENST00000472844 NAP1L2Q9ULW6 460 aaPredicted RBP8.7□□□□□ -1.02
NUP35-208ENST00000472844 KIF13AQ9H1H9 1805 aa8.69□□□□□ -1.02
NUP35-208ENST00000472844 LZTS3O60299 673 aaPredicted RBP8.69□□□□□ -1.02
NUP35-208ENST00000472844 PHF14O94880 888 aa8.69□□□□□ -1.02
NUP35-208ENST00000472844 GYS2P54840 703 aa8.69□□□□□ -1.02
NUP35-208ENST00000472844 FAM193AP78312 1265 aa8.69□□□□□ -1.02
NUP35-208ENST00000472844 BMS1Q14692 1282 aaKnown RBP8.69□□□□□ -1.02
NUP35-208ENST00000472844 DIXDC1Q155Q3 683 aa8.69□□□□□ -1.02
NUP35-208ENST00000472844 JAZF1Q86VZ6 243 aa8.69□□□□□ -1.02
NUP35-208ENST00000472844 FMNL3Q8IVF7 1028 aa8.69□□□□□ -1.02
NUP35-208ENST00000472844 SDR16C5Q8N3Y7 309 aa8.69□□□□□ -1.02
NUP35-208ENST00000472844 UCN2Q96RP3 112 aa8.69□□□□□ -1.02
NUP35-208ENST00000472844 TMEM106CQ9BVX2 250 aa8.69□□□□□ -1.02
NUP35-208ENST00000472844 EMILIN3Q9NT22 766 aa8.69□□□□□ -1.02
NUP35-208ENST00000472844 IFT57Q9NWB7 429 aa8.69□□□□□ -1.02
NUP35-208ENST00000472844 GEMIN8Q9NWZ8 242 aaKnown RBP8.69□□□□□ -1.02
NUP35-208ENST00000472844 KCNG1Q9UIX4 513 aa8.69□□□□□ -1.02
NUP35-208ENST00000472844 BDNFP23560 247 aa8.68□□□□□ -1.02
NUP35-208ENST00000472844 GNL2Q13823 731 aaKnown RBP8.68□□□□□ -1.02
NUP35-208ENST00000472844 CCSER2Q9H7U1 834 aa8.68□□□□□ -1.02
NUP35-208ENST00000472844 ANO8Q9HCE9 1232 aaPredicted RBP8.68□□□□□ -1.02
NUP35-208ENST00000472844 DDX56Q9NY93 547 aaKnown RBP8.68□□□□□ -1.02
NUP35-208ENST00000472844 DMGDHQ9UI17 866 aaKnown RBP8.68□□□□□ -1.02
NUP35-208ENST00000472844 ZMIZ1Q9ULJ6 1067 aa8.68□□□□□ -1.02
NUP35-208ENST00000472844 ZNF500O60304 480 aaPredicted RBP8.67□□□□□ -1.02
NUP35-208ENST00000472844 PPP4CP60510 307 aa8.67□□□□□ -1.02
NUP35-208ENST00000472844 RBL2Q08999 1139 aa8.67□□□□□ -1.02
NUP35-208ENST00000472844 VAC14Q08AM6 782 aa8.67□□□□□ -1.02
NUP35-208ENST00000472844 ZNF280DQ6N043 979 aa8.67□□□□□ -1.02
NUP35-208ENST00000472844 NT5DC4Q86YG4 428 aa8.67□□□□□ -1.02
NUP35-208ENST00000472844 IPO4Q8TEX9 1081 aaKnown RBP8.67□□□□□ -1.02
NUP35-208ENST00000472844 STK32AQ8WU08 396 aa8.67□□□□□ -1.02
NUP35-208ENST00000472844 TMX4Q9H1E5 349 aaPredicted RBP8.67□□□□□ -1.02
NUP35-208ENST00000472844 OSBPL2Q9H1P3 480 aa8.67□□□□□ -1.02
NUP35-208ENST00000472844 FAM217BQ9NTX9 383 aaPredicted RBP8.67□□□□□ -1.02
NUP35-208ENST00000472844 TCEAL9Q9UHQ7 104 aa8.67□□□□□ -1.02
NUP35-208ENST00000472844 URB2Q14146 1524 aaKnown RBP8.66□□□□□ -1.02
NUP35-208ENST00000472844 FANCD2Q9BXW9 1451 aa8.66□□□□□ -1.02
NUP35-208ENST00000472844 DISP3Q9P2K9 1392 aa8.66□□□□□ -1.02
NUP35-208ENST00000472844 CCDC189A1A4V9 331 aa8.66□□□□□ -1.02
NUP35-208ENST00000472844 DNAJC6O75061 913 aa8.66□□□□□ -1.02
NUP35-208ENST00000472844 ZNF710Q8N1W2 664 aa8.66□□□□□ -1.02
NUP35-208ENST00000472844 CXorf38Q8TB03 319 aa8.66□□□□□ -1.02
NUP35-208ENST00000472844 PCGF6Q9BYE7 350 aa8.66□□□□□ -1.02
NUP35-208ENST00000472844 TGIF2Q9GZN2 237 aa8.66□□□□□ -1.02
NUP35-208ENST00000472844 ST18O60284 1047 aa8.65□□□□□ -1.02
NUP35-208ENST00000472844 AP1G2O75843 785 aa8.65□□□□□ -1.02
NUP35-208ENST00000472844 OSBPP22059 807 aa8.65□□□□□ -1.02
NUP35-208ENST00000472844 MRPL58Q14197 206 aaKnown RBP8.65□□□□□ -1.02
NUP35-208ENST00000472844 COL19A1Q14993 1142 aa8.65□□□□□ -1.02
NUP35-208ENST00000472844 RPUSD2Q8IZ73 545 aaKnown RBP8.65□□□□□ -1.02
NUP35-208ENST00000472844 L3MBTL3Q96JM7 780 aaPredicted RBP8.65□□□□□ -1.02
NUP35-208ENST00000472844 NAP1L4Q99733 375 aaKnown RBP8.65□□□□□ -1.02
NUP35-208ENST00000472844 LIMD1Q9UGP4 676 aa8.65□□□□□ -1.02
NUP35-208ENST00000472844 PCDHB8Q9UN66 801 aa8.65□□□□□ -1.02
NUP35-208ENST00000472844 NOVA2Q9UNW9 492 aaKnown RBP8.65□□□□□ -1.02
NUP35-208ENST00000472844 STK10O94804 968 aaKnown RBP8.64□□□□□ -1.03
NUP35-208ENST00000472844 COPB2P35606 906 aa8.64□□□□□ -1.03
NUP35-208ENST00000472844 EAPPQ56P03 285 aaPredicted RBP8.64□□□□□ -1.03
NUP35-208ENST00000472844 EIF4G3O43432 1585 aaKnown RBP8.64□□□□□ -1.03
NUP35-208ENST00000472844 EPB41L2O43491 1005 aaKnown RBP8.63□□□□□ -1.03
NUP35-208ENST00000472844 ZRANB2O95218 330 aaKnown RBP eCLIP8.63□□□□□ -1.03
NUP35-208ENST00000472844 DNAJA1P31689 397 aaKnown RBP8.63□□□□□ -1.03
NUP35-208ENST00000472844 SOX11P35716 441 aa8.63□□□□□ -1.03
NUP35-208ENST00000472844 PTGDRQ13258 359 aa8.63□□□□□ -1.03
NUP35-208ENST00000472844 SAFB2Q14151 953 aaKnown RBP eCLIP8.63□□□□□ -1.03
NUP35-208ENST00000472844 GLIPR1L2Q4G1C9 344 aa8.63□□□□□ -1.03
NUP35-208ENST00000472844 JDP2Q8WYK2 163 aa8.63□□□□□ -1.03
NUP35-208ENST00000472844 ASB16Q96NS5 453 aa8.63□□□□□ -1.03
NUP35-208ENST00000472844 GMLQ99445 158 aa8.63□□□□□ -1.03
NUP35-208ENST00000472844 QTRT2Q9H974 415 aaKnown RBP8.63□□□□□ -1.03
NUP35-208ENST00000472844 MRPL42Q9Y6G3 142 aaKnown RBP8.63□□□□□ -1.03
NUP35-208ENST00000472844 USP17L8P0C7I0 530 aa8.62□□□□□ -1.03
NUP35-208ENST00000472844 MAPK1P28482 360 aa8.62□□□□□ -1.03
NUP35-208ENST00000472844 LMOD3Q0VAK6 560 aa8.62□□□□□ -1.03
NUP35-208ENST00000472844 FAM161AQ3B820 660 aa8.62□□□□□ -1.03
NUP35-208ENST00000472844 PPP1R18Q6NYC8 613 aa8.62□□□□□ -1.03
Retrieved 100 of 20,778 RNA–protein pairs in 27.9 ms