RNA–Protein interactions for RNA: ENST00000472815.5

HIF3A-206, Transcript of hypoxia inducible factor 3 subunit alpha, humanhuman

TSL 2 BASIC

Gene HIF3A, Length 1,709 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HIF3A-206ENST00000472815 EIF4A2Q14240 407 aaKnown RBP19.14■□□□□ 0.66
HIF3A-206ENST00000472815 BRINP3Q76B58 766 aa19.14■□□□□ 0.66
HIF3A-206ENST00000472815 WDR63Q8IWG1 891 aa19.14■□□□□ 0.66
HIF3A-206ENST00000472815 SLIT3O75094 1523 aa19.14■□□□□ 0.65
HIF3A-206ENST00000472815 NEUROD2Q15784 382 aa19.14■□□□□ 0.65
HIF3A-206ENST00000472815 LMOD2Q6P5Q4 547 aa19.14■□□□□ 0.65
HIF3A-206ENST00000472815 CDCA7LQ96GN5 454 aa19.14■□□□□ 0.65
HIF3A-206ENST00000472815 NFAT5O94916 1531 aa19.13■□□□□ 0.65
HIF3A-206ENST00000472815 PHRF1Q9P1Y6 1649 aaKnown RBP19.13■□□□□ 0.65
HIF3A-206ENST00000472815 PRKAR2BP31323 418 aa19.13■□□□□ 0.65
HIF3A-206ENST00000472815 XPCQ01831 940 aaPredicted RBP19.13■□□□□ 0.65
HIF3A-206ENST00000472815 HSP90AB2PQ58FF8 381 aa19.13■□□□□ 0.65
HIF3A-206ENST00000472815 TMPOP42166 694 aaKnown RBP19.12■□□□□ 0.65
HIF3A-206ENST00000472815 PIP4K2BP78356 416 aa19.12■□□□□ 0.65
HIF3A-206ENST00000472815 SLFN5Q08AF3 891 aa19.12■□□□□ 0.65
HIF3A-206ENST00000472815 PHF23Q9BUL5 403 aaPredicted RBP19.12■□□□□ 0.65
HIF3A-206ENST00000472815 RGPD1P0DJD0 1748 aa19.12■□□□□ 0.65
HIF3A-206ENST00000472815 ARHGEF10O15013 1369 aa19.12■□□□□ 0.65
HIF3A-206ENST00000472815 FKBP8Q14318 412 aa19.11■□□□□ 0.65
HIF3A-206ENST00000472815 RRP7AQ9Y3A4 280 aaKnown RBP19.11■□□□□ 0.65
HIF3A-206ENST00000472815 USP19O94966 1318 aa19.11■□□□□ 0.65
HIF3A-206ENST00000472815 HMOX1P09601 288 aa19.11■□□□□ 0.65
HIF3A-206ENST00000472815 HOXC9P31274 260 aa19.11■□□□□ 0.65
HIF3A-206ENST00000472815 RCAN3Q9UKA8 241 aa19.11■□□□□ 0.65
HIF3A-206ENST00000472815 TNS3Q68CZ2 1445 aa19.11■□□□□ 0.65
HIF3A-206ENST00000472815 AHDC1Q5TGY3 1603 aaPredicted RBP19.1■□□□□ 0.65
HIF3A-206ENST00000472815 GCP02774 474 aa19.09■□□□□ 0.65
HIF3A-206ENST00000472815 DUSP27Q5VZP5 1158 aa19.09■□□□□ 0.65
HIF3A-206ENST00000472815 ERICH6BQ5W0A0 696 aa19.09■□□□□ 0.65
HIF3A-206ENST00000472815 PXDNQ92626 1479 aa19.09■□□□□ 0.65
HIF3A-206ENST00000472815 PHLPP1O60346 1717 aa19.09■□□□□ 0.65
HIF3A-206ENST00000472815 LMOD3Q0VAK6 560 aa19.08■□□□□ 0.65
HIF3A-206ENST00000472815 TRMT2AQ8IZ69 625 aaKnown RBP19.08■□□□□ 0.65
HIF3A-206ENST00000472815 RIPK4P57078 832 aa19.08■□□□□ 0.64
HIF3A-206ENST00000472815 IP6K1Q92551 441 aa19.08■□□□□ 0.64
HIF3A-206ENST00000472815 MYH16Q9H6N6 1097 aa19.08■□□□□ 0.64
HIF3A-206ENST00000472815 CALD1Q05682 793 aaKnown RBP19.07■□□□□ 0.64
HIF3A-206ENST00000472815 NFE2L2Q16236 605 aa19.07■□□□□ 0.64
HIF3A-206ENST00000472815 SULT6B1Q6IMI4 303 aa19.07■□□□□ 0.64
HIF3A-206ENST00000472815 IL16Q14005 1332 aa19.05■□□□□ 0.64
HIF3A-206ENST00000472815 RNF123Q5XPI4 1314 aa19.05■□□□□ 0.64
HIF3A-206ENST00000472815 SPATA31A3Q5VYP0 1347 aa19.05■□□□□ 0.64
HIF3A-206ENST00000472815 IGSF1Q8N6C5 1336 aa19.05■□□□□ 0.64
HIF3A-206ENST00000472815 ARHGEF25Q86VW2 580 aa19.04■□□□□ 0.64
HIF3A-206ENST00000472815 KDRP35968 1356 aa19.04■□□□□ 0.64
HIF3A-206ENST00000472815 MED1Q15648 1581 aaPredicted RBP19.04■□□□□ 0.64
HIF3A-206ENST00000472815 SOS2Q07890 1332 aaPredicted RBP19.03■□□□□ 0.64
HIF3A-206ENST00000472815 DDX17Q92841 729 aaKnown RBP19.03■□□□□ 0.64
HIF3A-206ENST00000472815 COL16A1Q07092 1604 aaPredicted RBP19.03■□□□□ 0.64
HIF3A-206ENST00000472815 PHACTR3Q96KR7 559 aa19.02■□□□□ 0.63
HIF3A-206ENST00000472815 TRIM35Q9UPQ4 493 aa19.02■□□□□ 0.63
HIF3A-206ENST00000472815 ABCC6O95255 1503 aa19.01■□□□□ 0.63
HIF3A-206ENST00000472815 DLG5Q8TDM6 1919 aa19.01■□□□□ 0.63
HIF3A-206ENST00000472815 ZBTB7CA1YPR0 619 aa19.01■□□□□ 0.63
HIF3A-206ENST00000472815 FBXO41Q8TF61 875 aa19.01■□□□□ 0.63
HIF3A-206ENST00000472815 EYA1Q99502 592 aa19.01■□□□□ 0.63
HIF3A-206ENST00000472815 RRP1P56182 461 aaKnown RBP19■□□□□ 0.63
HIF3A-206ENST00000472815 AEBP1Q8IUX7 1158 aa19■□□□□ 0.63
HIF3A-206ENST00000472815 GOLGA6L2Q8N9W4 650 aaPredicted RBP19■□□□□ 0.63
HIF3A-206ENST00000472815 SPINK5Q9NQ38 1064 aaPredicted RBP19■□□□□ 0.63
HIF3A-206ENST00000472815 CRYBG1Q9Y4K1 1723 aa18.98■□□□□ 0.63
HIF3A-206ENST00000472815 LTV1Q96GA3 475 aaPredicted RBP18.98■□□□□ 0.63
HIF3A-206ENST00000472815 CT47B1P0C2W7 299 aaPredicted RBP18.97■□□□□ 0.63
HIF3A-206ENST00000472815 GAS2L2Q8NHY3 880 aa18.97■□□□□ 0.63
HIF3A-206ENST00000472815 LRRC59Q96AG4 307 aaKnown RBP18.97■□□□□ 0.63
HIF3A-206ENST00000472815 PLEKHG5O94827 1062 aa18.97■□□□□ 0.63
HIF3A-206ENST00000472815 CPDO75976 1380 aa18.95■□□□□ 0.62
HIF3A-206ENST00000472815 ZC3H6P61129 1189 aaKnown RBP18.94■□□□□ 0.62
HIF3A-206ENST00000472815 GNAI1P63096 354 aa18.94■□□□□ 0.62
HIF3A-206ENST00000472815 IRX6P78412 446 aaPredicted RBP18.94■□□□□ 0.62
HIF3A-206ENST00000472815 FAM208AQ9UK61 1670 aaKnown RBP18.94■□□□□ 0.62
HIF3A-206ENST00000472815 HAP1P54257 671 aaPredicted RBP18.94■□□□□ 0.62
HIF3A-206ENST00000472815 HSPA1LP34931 641 aa18.93■□□□□ 0.62
HIF3A-206ENST00000472815 ANKRD24Q8TF21 1146 aa18.93■□□□□ 0.62
HIF3A-206ENST00000472815 RTF1Q92541 710 aaKnown RBP18.93■□□□□ 0.62
HIF3A-206ENST00000472815 IFT57Q9NWB7 429 aa18.93■□□□□ 0.62
HIF3A-206ENST00000472815 COL22A1Q8NFW1 1626 aaPredicted RBP18.93■□□□□ 0.62
HIF3A-206ENST00000472815 FANCIQ9NVI1 1328 aa18.93■□□□□ 0.62
HIF3A-206ENST00000472815 RGPD5Q99666 1765 aa18.92■□□□□ 0.62
HIF3A-206ENST00000472815 CAMTA1Q9Y6Y1 1673 aa18.92■□□□□ 0.62
HIF3A-206ENST00000472815 HTATSF1O43719 755 aaKnown RBP18.91■□□□□ 0.62
HIF3A-206ENST00000472815 PELP1Q8IZL8 1130 aaKnown RBP18.91■□□□□ 0.62
HIF3A-206ENST00000472815 RGPD2P0DJD1 1756 aa18.91■□□□□ 0.62
HIF3A-206ENST00000472815 ERBB3P21860 1342 aa18.9■□□□□ 0.62
HIF3A-206ENST00000472815 COL18A1P39060 1754 aa18.9■□□□□ 0.62
HIF3A-206ENST00000472815 PPP4R2Q9NY27 417 aa18.9■□□□□ 0.62
HIF3A-206ENST00000472815 ABCA3Q99758 1704 aa18.9■□□□□ 0.62
HIF3A-206ENST00000472815 NCAPD2Q15021 1401 aa18.89■□□□□ 0.62
HIF3A-206ENST00000472815 NBPF6Q5VWK0 638 aa18.89■□□□□ 0.61
HIF3A-206ENST00000472815 CABLES1Q8TDN4 633 aa18.89■□□□□ 0.61
HIF3A-206ENST00000472815 NBPF4Q96M43 638 aa18.89■□□□□ 0.61
HIF3A-206ENST00000472815 JCADQ9P266 1359 aa18.89■□□□□ 0.61
HIF3A-206ENST00000472815 MTHFSDQ2M296 383 aaKnown RBP18.88■□□□□ 0.61
HIF3A-206ENST00000472815 CFAP44Q96MT7 982 aa18.88■□□□□ 0.61
HIF3A-206ENST00000472815 KIAA0232Q92628 1395 aa18.88■□□□□ 0.61
HIF3A-206ENST00000472815 TSR2Q969E8 191 aaKnown RBP18.88■□□□□ 0.61
HIF3A-206ENST00000472815 LAS1LQ9Y4W2 734 aaKnown RBP18.88■□□□□ 0.61
HIF3A-206ENST00000472815 AMOTQ4VCS5 1084 aa18.87■□□□□ 0.61
HIF3A-206ENST00000472815 ZNF428Q96B54 188 aa18.87■□□□□ 0.61
HIF3A-206ENST00000472815 AXIN2Q9Y2T1 843 aa18.87■□□□□ 0.61
Retrieved 100 of 20,778 RNA–protein pairs in 41.3 ms