RNA–Protein interactions for RNA: ENST00000472411.1

TMEM9-208, Transcript of transmembrane protein 9, humanhuman

TSL 2

Gene TMEM9, Length 2,892 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM9-208ENST00000472411 RAB3GAP1Q15042 981 aa13.27□□□□□ -0.29
TMEM9-208ENST00000472411 KIF20BQ96Q89 1820 aa13.27□□□□□ -0.29
TMEM9-208ENST00000472411 RBM42Q9BTD8 480 aaKnown RBP13.26□□□□□ -0.29
TMEM9-208ENST00000472411 CHMP4BQ9H444 224 aaKnown RBP13.26□□□□□ -0.29
TMEM9-208ENST00000472411 FOXD4L1Q9NU39 408 aa13.26□□□□□ -0.29
TMEM9-208ENST00000472411 PIK3R4Q99570 1358 aa13.26□□□□□ -0.29
TMEM9-208ENST00000472411 CLCN1P35523 988 aa13.26□□□□□ -0.29
TMEM9-208ENST00000472411 TMEM131LA2VDJ0 1609 aa13.25□□□□□ -0.29
TMEM9-208ENST00000472411 ARHGEF40Q8TER5 1519 aa13.25□□□□□ -0.29
TMEM9-208ENST00000472411 HSP90AA1P07900 732 aaKnown RBP13.25□□□□□ -0.29
TMEM9-208ENST00000472411 GNAI1P63096 354 aa13.25□□□□□ -0.29
TMEM9-208ENST00000472411 GAS2L3Q86XJ1 694 aa13.25□□□□□ -0.29
TMEM9-208ENST00000472411 GBP4Q96PP9 640 aa13.25□□□□□ -0.29
TMEM9-208ENST00000472411 MBIPQ9NS73 344 aa13.25□□□□□ -0.29
TMEM9-208ENST00000472411 CDC42BPGQ6DT37 1551 aa13.25□□□□□ -0.29
TMEM9-208ENST00000472411 DIP2CQ9Y2E4 1556 aa13.25□□□□□ -0.29
TMEM9-208ENST00000472411 PTCH1Q13635 1447 aa13.25□□□□□ -0.29
TMEM9-208ENST00000472411 ZNF853P0CG23 659 aa13.24□□□□□ -0.29
TMEM9-208ENST00000472411 FBXO31Q5XUX0 539 aaPredicted RBP13.24□□□□□ -0.29
TMEM9-208ENST00000472411 IFT57Q9NWB7 429 aa13.24□□□□□ -0.29
TMEM9-208ENST00000472411 ISY1Q9ULR0 285 aaKnown RBP13.24□□□□□ -0.29
TMEM9-208ENST00000472411 AK9Q5TCS8 1911 aa13.24□□□□□ -0.29
TMEM9-208ENST00000472411 K7ELQ4 463 aaPredicted RBP13.24□□□□□ -0.29
TMEM9-208ENST00000472411 CALD1Q05682 793 aaKnown RBP13.24□□□□□ -0.29
TMEM9-208ENST00000472411 EMILIN1Q9Y6C2 1016 aa13.24□□□□□ -0.29
TMEM9-208ENST00000472411 ABCC4O15439 1325 aa13.24□□□□□ -0.29
TMEM9-208ENST00000472411 WAPLQ7Z5K2 1190 aa13.23□□□□□ -0.29
TMEM9-208ENST00000472411 C8orf58Q8NAV2 365 aa13.23□□□□□ -0.29
TMEM9-208ENST00000472411 TWISTNBQ3B726 338 aaPredicted RBP13.23□□□□□ -0.29
TMEM9-208ENST00000472411 IL13P35225 146 aa13.22□□□□□ -0.29
TMEM9-208ENST00000472411 ALKQ9UM73 1620 aa13.22□□□□□ -0.29
TMEM9-208ENST00000472411 SKOR2Q2VWA4 1001 aaPredicted RBP13.22□□□□□ -0.29
TMEM9-208ENST00000472411 GAS2L2Q8NHY3 880 aa13.22□□□□□ -0.29
TMEM9-208ENST00000472411 PREX1Q8TCU6 1659 aa13.22□□□□□ -0.29
TMEM9-208ENST00000472411 NEO1Q92859 1461 aa13.21□□□□□ -0.29
TMEM9-208ENST00000472411 DLG5Q8TDM6 1919 aa13.21□□□□□ -0.29
TMEM9-208ENST00000472411 CDC45O75419 566 aa13.21□□□□□ -0.3
TMEM9-208ENST00000472411 GSPT1P15170 499 aaKnown RBP13.21□□□□□ -0.3
TMEM9-208ENST00000472411 SSFA2P28290 1259 aa13.21□□□□□ -0.3
TMEM9-208ENST00000472411 CFAP44Q96MT7 982 aa13.21□□□□□ -0.3
TMEM9-208ENST00000472411 YEATS2Q9ULM3 1422 aa13.21□□□□□ -0.3
TMEM9-208ENST00000472411 FAM83GA6ND36 823 aa13.2□□□□□ -0.3
TMEM9-208ENST00000472411 PLEKHM2Q8IWE5 1019 aa13.2□□□□□ -0.3
TMEM9-208ENST00000472411 UBE2Q2Q8WVN8 375 aa13.2□□□□□ -0.3
TMEM9-208ENST00000472411 ZRANB1Q9UGI0 708 aa13.2□□□□□ -0.3
TMEM9-208ENST00000472411 NAP1L5Q96NT1 182 aaPredicted RBP13.2□□□□□ -0.3
TMEM9-208ENST00000472411 API5Q9BZZ5 524 aaKnown RBP13.2□□□□□ -0.3
TMEM9-208ENST00000472411 STAG3Q9UJ98 1225 aa13.2□□□□□ -0.3
TMEM9-208ENST00000472411 NME9Q86XW9 330 aa13.19□□□□□ -0.3
TMEM9-208ENST00000472411 ESPNB1AK53 854 aa13.19□□□□□ -0.3
TMEM9-208ENST00000472411 DCTN1Q14203 1278 aa13.19□□□□□ -0.3
TMEM9-208ENST00000472411 DCTPP1Q9H773 170 aa13.19□□□□□ -0.3
TMEM9-208ENST00000472411 ERBB4Q15303 1308 aa13.19□□□□□ -0.3
TMEM9-208ENST00000472411 PTMSP20962 102 aa13.18□□□□□ -0.3
TMEM9-208ENST00000472411 C16orf71Q8IYS4 520 aaPredicted RBP13.18□□□□□ -0.3
TMEM9-208ENST00000472411 ATP7BP35670 1465 aa13.18□□□□□ -0.3
TMEM9-208ENST00000472411 RICTORQ6R327 1708 aa13.17□□□□□ -0.3
TMEM9-208ENST00000472411 CLEC17AQ6ZS10 378 aa13.17□□□□□ -0.3
TMEM9-208ENST00000472411 RRS1Q15050 365 aaKnown RBP13.17□□□□□ -0.3
TMEM9-208ENST00000472411 KNDC1Q76NI1 1749 aa13.16□□□□□ -0.3
TMEM9-208ENST00000472411 BAG4O95429 457 aaKnown RBP13.16□□□□□ -0.3
TMEM9-208ENST00000472411 LMOD3Q0VAK6 560 aa13.16□□□□□ -0.3
TMEM9-208ENST00000472411 TTC22Q5TAA0 569 aa13.16□□□□□ -0.3
TMEM9-208ENST00000472411 TRIM44Q96DX7 344 aaPredicted RBP13.16□□□□□ -0.3
TMEM9-208ENST00000472411 GOLGA6L22H0YM25 854 aa13.15□□□□□ -0.3
TMEM9-208ENST00000472411 USP26Q9BXU7 913 aa13.15□□□□□ -0.3
TMEM9-208ENST00000472411 CPSF1Q10570 1443 aaKnown RBP13.15□□□□□ -0.3
TMEM9-208ENST00000472411 RABEP1Q15276 862 aa13.15□□□□□ -0.3
TMEM9-208ENST00000472411 INTS3Q68E01 1043 aaKnown RBP13.15□□□□□ -0.3
TMEM9-208ENST00000472411 OSCARQ8IYS5 282 aa13.15□□□□□ -0.3
TMEM9-208ENST00000472411 OTUD7AQ8TE49 926 aaPredicted RBP13.15□□□□□ -0.3
TMEM9-208ENST00000472411 DDX49Q9Y6V7 483 aaKnown RBP13.15□□□□□ -0.3
TMEM9-208ENST00000472411 RIMS2Q9UQ26 1411 aa13.15□□□□□ -0.3
TMEM9-208ENST00000472411 KIF24Q5T7B8 1368 aa13.14□□□□□ -0.31
TMEM9-208ENST00000472411 EDC4Q6P2E9 1401 aaKnown RBP13.14□□□□□ -0.31
TMEM9-208ENST00000472411 WASLO00401 505 aaPredicted RBP13.14□□□□□ -0.31
TMEM9-208ENST00000472411 REREQ9P2R6 1566 aa13.14□□□□□ -0.31
TMEM9-208ENST00000472411 NCKAP5LQ9HCH0 1330 aa13.14□□□□□ -0.31
TMEM9-208ENST00000472411 CDK12Q9NYV4 1490 aaPredicted RBP13.14□□□□□ -0.31
TMEM9-208ENST00000472411 KRT24Q2M2I5 525 aa13.14□□□□□ -0.31
TMEM9-208ENST00000472411 KLHL40Q2TBA0 621 aa13.14□□□□□ -0.31
TMEM9-208ENST00000472411 ANKRD44Q8N8A2 993 aa13.14□□□□□ -0.31
TMEM9-208ENST00000472411 COG3Q96JB2 828 aa13.14□□□□□ -0.31
TMEM9-208ENST00000472411 AATKQ6ZMQ8 1374 aa13.13□□□□□ -0.31
TMEM9-208ENST00000472411 DLC1Q96QB1 1528 aa13.13□□□□□ -0.31
TMEM9-208ENST00000472411 SMARCA5O60264 1052 aaPredicted RBP13.12□□□□□ -0.31
TMEM9-208ENST00000472411 SDSP20132 328 aa13.12□□□□□ -0.31
TMEM9-208ENST00000472411 RPAP2Q8IXW5 612 aaPredicted RBP13.12□□□□□ -0.31
TMEM9-208ENST00000472411 APBB1O00213 710 aa13.11□□□□□ -0.31
TMEM9-208ENST00000472411 PKP1Q13835 747 aa13.11□□□□□ -0.31
TMEM9-208ENST00000472411 MCTP1Q6DN14 999 aa13.11□□□□□ -0.31
TMEM9-208ENST00000472411 CEP85Q6P2H3 762 aa13.11□□□□□ -0.31
TMEM9-208ENST00000472411 NUDT16Q96DE0 195 aaKnown RBP13.11□□□□□ -0.31
TMEM9-208ENST00000472411 ATP10DQ9P241 1426 aa13.11□□□□□ -0.31
TMEM9-208ENST00000472411 NASPP49321 788 aaPredicted RBP13.11□□□□□ -0.31
TMEM9-208ENST00000472411 NUCB2P80303 420 aa13.11□□□□□ -0.31
TMEM9-208ENST00000472411 AEBP1Q8IUX7 1158 aa13.11□□□□□ -0.31
TMEM9-208ENST00000472411 CYP2E1P05181 493 aaPredicted RBP13.1□□□□□ -0.31
TMEM9-208ENST00000472411 PPP1R9BQ96SB3 815 aa13.1□□□□□ -0.31
TMEM9-208ENST00000472411 CPS1P31327 1500 aa13.1□□□□□ -0.31
Retrieved 100 of 20,778 RNA–protein pairs in 34.9 ms