RNA–Protein interactions for RNA: ENST00000471935.1

TRBV11-2-201, Transcript of T cell receptor beta variable 11-2, humanhuman

TSL 1 (best) BASIC

Gene TRBV11-2, Length 408 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRBV11-2-201ENST00000471935 PEAK1Q9H792 1746 aa17.8■□□□□ 0.44
TRBV11-2-201ENST00000471935 EDC4Q6P2E9 1401 aaKnown RBP17.79■□□□□ 0.44
TRBV11-2-201ENST00000471935 DISP2A7MBM2 1401 aa17.78■□□□□ 0.44
TRBV11-2-201ENST00000471935 USP47Q96K76 1375 aa17.78■□□□□ 0.44
TRBV11-2-201ENST00000471935 EN1Q05925 392 aaPredicted RBP17.77■□□□□ 0.44
TRBV11-2-201ENST00000471935 SF3B2Q13435 895 aaKnown RBP17.77■□□□□ 0.44
TRBV11-2-201ENST00000471935 KCNH5Q8NCM2 988 aa17.77■□□□□ 0.44
TRBV11-2-201ENST00000471935 THRAP3Q9Y2W1 955 aaKnown RBP17.77■□□□□ 0.44
TRBV11-2-201ENST00000471935 SBF2Q86WG5 1849 aa17.77■□□□□ 0.43
TRBV11-2-201ENST00000471935 WDR17Q8IZU2 1322 aa17.76■□□□□ 0.43
TRBV11-2-201ENST00000471935 OVOS2A0A0J9YW53 1432 aa17.76■□□□□ 0.43
TRBV11-2-201ENST00000471935 OVOS2Q6IE36 1432 aa17.76■□□□□ 0.43
TRBV11-2-201ENST00000471935 TRIM37O94972 964 aa17.76■□□□□ 0.43
TRBV11-2-201ENST00000471935 FAM196AQ6ZSG2 479 aa17.75■□□□□ 0.43
TRBV11-2-201ENST00000471935 PCGF6Q9BYE7 350 aa17.75■□□□□ 0.43
TRBV11-2-201ENST00000471935 ABCC6O95255 1503 aa17.75■□□□□ 0.43
TRBV11-2-201ENST00000471935 BAG6P46379 1132 aa17.74■□□□□ 0.43
TRBV11-2-201ENST00000471935 TOM1L2Q6ZVM7 507 aa17.74■□□□□ 0.43
TRBV11-2-201ENST00000471935 HDGFL2Q7Z4V5 671 aaPredicted RBP17.74■□□□□ 0.43
TRBV11-2-201ENST00000471935 PDE3BQ13370 1112 aa17.73■□□□□ 0.43
TRBV11-2-201ENST00000471935 TERF2IPQ9NYB0 399 aa17.73■□□□□ 0.43
TRBV11-2-201ENST00000471935 RREB1Q92766 1687 aa17.73■□□□□ 0.43
TRBV11-2-201ENST00000471935 MYOM1P52179 1685 aa17.72■□□□□ 0.43
TRBV11-2-201ENST00000471935 EZH2Q15910 746 aaKnown RBP17.72■□□□□ 0.43
TRBV11-2-201ENST00000471935 CAMKK2Q96RR4 588 aa17.72■□□□□ 0.43
TRBV11-2-201ENST00000471935 NINLQ9Y2I6 1382 aa17.71■□□□□ 0.43
TRBV11-2-201ENST00000471935 CLSPNQ9HAW4 1339 aa17.71■□□□□ 0.42
TRBV11-2-201ENST00000471935 NUP188Q5SRE5 1749 aa17.7■□□□□ 0.42
TRBV11-2-201ENST00000471935 PTF1AQ7RTS3 328 aa17.7■□□□□ 0.42
TRBV11-2-201ENST00000471935 CARD10Q9BWT7 1032 aa17.7■□□□□ 0.42
TRBV11-2-201ENST00000471935 PSDA5PKW4 1024 aaPredicted RBP17.69■□□□□ 0.42
TRBV11-2-201ENST00000471935 FBLN1P23142 703 aa17.69■□□□□ 0.42
TRBV11-2-201ENST00000471935 ERBB3P21860 1342 aa17.69■□□□□ 0.42
TRBV11-2-201ENST00000471935 ANKRD36BQ8N2N9 1353 aa17.68■□□□□ 0.42
TRBV11-2-201ENST00000471935 MARCH10Q8NA82 808 aaPredicted RBP17.68■□□□□ 0.42
TRBV11-2-201ENST00000471935 OVOS2A0A0G2JMS6 1433 aa17.67■□□□□ 0.42
TRBV11-2-201ENST00000471935 RGPD2P0DJD1 1756 aa17.67■□□□□ 0.42
TRBV11-2-201ENST00000471935 APBA3O96018 575 aa17.67■□□□□ 0.42
TRBV11-2-201ENST00000471935 CSB-PGBD3P0DP91 1061 aa17.67■□□□□ 0.42
TRBV11-2-201ENST00000471935 DDB1Q16531 1140 aa17.67■□□□□ 0.42
TRBV11-2-201ENST00000471935 TIMELESSQ9UNS1 1208 aa17.67■□□□□ 0.42
TRBV11-2-201ENST00000471935 TMF1P82094 1093 aa17.66■□□□□ 0.42
TRBV11-2-201ENST00000471935 KIF20BQ96Q89 1820 aa17.65■□□□□ 0.42
TRBV11-2-201ENST00000471935 LRP5O75197 1615 aa17.65■□□□□ 0.42
TRBV11-2-201ENST00000471935 SLC24A1O60721 1099 aa17.64■□□□□ 0.41
TRBV11-2-201ENST00000471935 CCDC7Q96M83 1385 aa17.64■□□□□ 0.41
TRBV11-2-201ENST00000471935 FYB1O15117 783 aa17.63■□□□□ 0.41
TRBV11-2-201ENST00000471935 ANKRD24Q8TF21 1146 aa17.63■□□□□ 0.41
TRBV11-2-201ENST00000471935 MAP3K19Q56UN5 1328 aa17.63■□□□□ 0.41
TRBV11-2-201ENST00000471935 RGPD3A6NKT7 1758 aaPredicted RBP17.63■□□□□ 0.41
TRBV11-2-201ENST00000471935 RGPD4Q7Z3J3 1758 aa17.63■□□□□ 0.41
TRBV11-2-201ENST00000471935 BCL9O00512 1426 aa17.63■□□□□ 0.41
TRBV11-2-201ENST00000471935 TNS2Q63HR2 1409 aa17.63■□□□□ 0.41
TRBV11-2-201ENST00000471935 FAM208AQ9UK61 1670 aaKnown RBP17.62■□□□□ 0.41
TRBV11-2-201ENST00000471935 R3HDM1Q15032 1099 aaKnown RBP17.62■□□□□ 0.41
TRBV11-2-201ENST00000471935 IP6K1Q92551 441 aa17.62■□□□□ 0.41
TRBV11-2-201ENST00000471935 CARD14Q9BXL6 1004 aa17.62■□□□□ 0.41
TRBV11-2-201ENST00000471935 NLRP2Q9NX02 1062 aa17.62■□□□□ 0.41
TRBV11-2-201ENST00000471935 CDCA7Q9BWT1 371 aaPredicted RBP17.61■□□□□ 0.41
TRBV11-2-201ENST00000471935 GGNBP2Q9H3C7 697 aa17.61■□□□□ 0.41
TRBV11-2-201ENST00000471935 PARD3Q8TEW0 1356 aa17.61■□□□□ 0.41
TRBV11-2-201ENST00000471935 COG3Q96JB2 828 aa17.6■□□□□ 0.41
TRBV11-2-201ENST00000471935 HOXC9P31274 260 aa17.59■□□□□ 0.41
TRBV11-2-201ENST00000471935 SHANK3Q9BYB0 1731 aa17.58■□□□□ 0.41
TRBV11-2-201ENST00000471935 NHSQ6T4R5 1651 aa17.58■□□□□ 0.41
TRBV11-2-201ENST00000471935 EXOC5O00471 708 aa17.58■□□□□ 0.4
TRBV11-2-201ENST00000471935 RRS1Q15050 365 aaKnown RBP17.58■□□□□ 0.4
TRBV11-2-201ENST00000471935 PROM2Q8N271 834 aa17.58■□□□□ 0.4
TRBV11-2-201ENST00000471935 LTV1Q96GA3 475 aaPredicted RBP17.57■□□□□ 0.4
TRBV11-2-201ENST00000471935 BCL11BQ9C0K0 894 aaPredicted RBP17.57■□□□□ 0.4
TRBV11-2-201ENST00000471935 C11orf95C9JLR9 678 aaPredicted RBP17.56■□□□□ 0.4
TRBV11-2-201ENST00000471935 KCNQ2O43526 872 aa17.56■□□□□ 0.4
TRBV11-2-201ENST00000471935 IL2RBP14784 551 aa17.56■□□□□ 0.4
TRBV11-2-201ENST00000471935 CCER1Q8TC90 406 aaPredicted RBP17.56■□□□□ 0.4
TRBV11-2-201ENST00000471935 NSD3Q9BZ95 1437 aa17.55■□□□□ 0.4
TRBV11-2-201ENST00000471935 PLSCR1O15162 318 aa17.55■□□□□ 0.4
TRBV11-2-201ENST00000471935 CDCA8Q53HL2 280 aa17.55■□□□□ 0.4
TRBV11-2-201ENST00000471935 KAT6BQ8WYB5 2073 aa17.55■□□□□ 0.4
TRBV11-2-201ENST00000471935 BTAF1O14981 1849 aa17.54■□□□□ 0.4
TRBV11-2-201ENST00000471935 ANO8Q9HCE9 1232 aaPredicted RBP17.54■□□□□ 0.4
TRBV11-2-201ENST00000471935 HSPA5P11021 654 aaKnown RBP17.53■□□□□ 0.4
TRBV11-2-201ENST00000471935 AMPHP49418 695 aa17.53■□□□□ 0.4
TRBV11-2-201ENST00000471935 RTL1A6NKG5 1358 aa17.53■□□□□ 0.4
TRBV11-2-201ENST00000471935 ANKRD26Q9UPS8 1709 aa17.52■□□□□ 0.4
TRBV11-2-201ENST00000471935 MEGF6O75095 1541 aa17.52■□□□□ 0.4
TRBV11-2-201ENST00000471935 ACSBG1Q96GR2 724 aa17.52■□□□□ 0.4
TRBV11-2-201ENST00000471935 MAP2P11137 1827 aaKnown RBP17.51■□□□□ 0.39
TRBV11-2-201ENST00000471935 NBPF6Q5VWK0 638 aa17.51■□□□□ 0.39
TRBV11-2-201ENST00000471935 NBPF4Q96M43 638 aa17.51■□□□□ 0.39
TRBV11-2-201ENST00000471935 CASZ1Q86V15 1759 aa17.51■□□□□ 0.39
TRBV11-2-201ENST00000471935 HSP90AB2PQ58FF8 381 aa17.5■□□□□ 0.39
TRBV11-2-201ENST00000471935 USHBP1Q8N6Y0 703 aa17.49■□□□□ 0.39
TRBV11-2-201ENST00000471935 EMILIN1Q9Y6C2 1016 aa17.49■□□□□ 0.39
TRBV11-2-201ENST00000471935 DOT1LQ8TEK3 1739 aa17.49■□□□□ 0.39
TRBV11-2-201ENST00000471935 EIF4G2P78344 907 aaKnown RBP eCLIP17.48■□□□□ 0.39
TRBV11-2-201ENST00000471935 PDGFDQ9GZP0 370 aaPredicted RBP17.48■□□□□ 0.39
TRBV11-2-201ENST00000471935 PAPPAQ13219 1627 aa17.47■□□□□ 0.39
TRBV11-2-201ENST00000471935 TXNRD1Q16881 649 aa17.47■□□□□ 0.39
TRBV11-2-201ENST00000471935 INSRP06213 1382 aa17.47■□□□□ 0.39
TRBV11-2-201ENST00000471935 FLT4P35916 1363 aa17.46■□□□□ 0.39
Retrieved 100 of 20,778 RNA–protein pairs in 20.5 ms