RNA–Protein interactions for RNA: ENST00000471660.5

CHMP2B-203, Transcript of charged multivesicular body protein 2B, humanhuman

TSL 2 BASIC

Gene CHMP2B, Length 2,528 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP2B-203ENST00000471660 MCM5P33992 734 aa13.48□□□□□ -0.25
CHMP2B-203ENST00000471660 KLHL34Q8N239 644 aa13.48□□□□□ -0.25
CHMP2B-203ENST00000471660 C8orf37Q96NL8 207 aa13.48□□□□□ -0.25
CHMP2B-203ENST00000471660 GRWD1Q9BQ67 446 aaKnown RBP eCLIP13.48□□□□□ -0.25
CHMP2B-203ENST00000471660 TRPC5Q9UL62 973 aaPredicted RBP13.48□□□□□ -0.25
CHMP2B-203ENST00000471660 PNPLA6Q8IY17 1366 aa13.48□□□□□ -0.25
CHMP2B-203ENST00000471660 SEC24BO95487 1268 aa13.47□□□□□ -0.25
CHMP2B-203ENST00000471660 TEX2Q8IWB9 1127 aa13.47□□□□□ -0.25
CHMP2B-203ENST00000471660 SLC20A2Q08357 652 aa13.47□□□□□ -0.25
CHMP2B-203ENST00000471660 SENP3-EIF4A1A0A087X0R7 540 aa13.46□□□□□ -0.25
CHMP2B-203ENST00000471660 CADPS2Q86UW7 1296 aa13.46□□□□□ -0.25
CHMP2B-203ENST00000471660 UPF2Q9HAU5 1272 aaKnown RBP13.46□□□□□ -0.25
CHMP2B-203ENST00000471660 PTCH1Q13635 1447 aa13.46□□□□□ -0.25
CHMP2B-203ENST00000471660 DCCP43146 1447 aa13.45□□□□□ -0.26
CHMP2B-203ENST00000471660 TNKS1BP1Q9C0C2 1729 aaKnown RBP13.45□□□□□ -0.26
CHMP2B-203ENST00000471660 NASPP49321 788 aaPredicted RBP13.45□□□□□ -0.26
CHMP2B-203ENST00000471660 TMF1P82094 1093 aa13.45□□□□□ -0.26
CHMP2B-203ENST00000471660 GOLGA6L2Q8N9W4 650 aaPredicted RBP13.45□□□□□ -0.26
CHMP2B-203ENST00000471660 ADGRB3O60242 1522 aa13.45□□□□□ -0.26
CHMP2B-203ENST00000471660 NLRP13Q86W25 1043 aa13.44□□□□□ -0.26
CHMP2B-203ENST00000471660 ZNF692Q9BU19 519 aaPredicted RBP13.44□□□□□ -0.26
CHMP2B-203ENST00000471660 SBNO2Q9Y2G9 1366 aa13.43□□□□□ -0.26
CHMP2B-203ENST00000471660 ST20-MTHFSA0A0A6YYL1 179 aa13.43□□□□□ -0.26
CHMP2B-203ENST00000471660 DDIT3P35638 169 aa13.43□□□□□ -0.26
CHMP2B-203ENST00000471660 PARD3Q8TEW0 1356 aa13.43□□□□□ -0.26
CHMP2B-203ENST00000471660 NPC1L1Q9UHC9 1359 aa13.42□□□□□ -0.26
CHMP2B-203ENST00000471660 PDLIM2Q96JY6 352 aa13.42□□□□□ -0.26
CHMP2B-203ENST00000471660 EIF2AK3Q9NZJ5 1116 aaKnown RBP13.42□□□□□ -0.26
CHMP2B-203ENST00000471660 BRINP3Q76B58 766 aa13.42□□□□□ -0.26
CHMP2B-203ENST00000471660 KDM2AQ9Y2K7 1162 aa13.42□□□□□ -0.26
CHMP2B-203ENST00000471660 LRRC59Q96AG4 307 aaKnown RBP13.41□□□□□ -0.26
CHMP2B-203ENST00000471660 CFAP65Q6ZU64 1925 aaKnown RBP13.41□□□□□ -0.26
CHMP2B-203ENST00000471660 COL22A1Q8NFW1 1626 aaPredicted RBP13.41□□□□□ -0.26
CHMP2B-203ENST00000471660 MARF1Q9Y4F3 1742 aaKnown RBP13.41□□□□□ -0.26
CHMP2B-203ENST00000471660 CIZ1Q9ULV3 898 aaPredicted RBP13.4□□□□□ -0.26
CHMP2B-203ENST00000471660 ZKSCAN5Q9Y2L8 839 aa13.4□□□□□ -0.26
CHMP2B-203ENST00000471660 NOS1P29475 1434 aa13.4□□□□□ -0.26
CHMP2B-203ENST00000471660 GTF2F1P35269 517 aaKnown RBP eCLIP13.4□□□□□ -0.26
CHMP2B-203ENST00000471660 MYRIPQ8NFW9 859 aa13.4□□□□□ -0.26
CHMP2B-203ENST00000471660 TESK2Q96S53 571 aa13.4□□□□□ -0.26
CHMP2B-203ENST00000471660 USP21Q9UK80 565 aa13.4□□□□□ -0.26
CHMP2B-203ENST00000471660 VGLL3A8MV65 326 aa13.39□□□□□ -0.27
CHMP2B-203ENST00000471660 ZFYVE9O95405 1425 aa13.39□□□□□ -0.27
CHMP2B-203ENST00000471660 ATF3P18847 181 aa13.39□□□□□ -0.27
CHMP2B-203ENST00000471660 BRD2P25440 801 aaKnown RBP13.39□□□□□ -0.27
CHMP2B-203ENST00000471660 ZFP91Q96JP5 570 aaPredicted RBP13.39□□□□□ -0.27
CHMP2B-203ENST00000471660 PUS7Q96PZ0 661 aaKnown RBP13.39□□□□□ -0.27
CHMP2B-203ENST00000471660 SLC26A8Q96RN1 970 aa13.39□□□□□ -0.27
CHMP2B-203ENST00000471660 PPLO60437 1756 aa13.39□□□□□ -0.27
CHMP2B-203ENST00000471660 RBM25P49756 843 aaKnown RBP13.39□□□□□ -0.27
CHMP2B-203ENST00000471660 FNBP4Q8N3X1 1017 aaPredicted RBP13.39□□□□□ -0.27
CHMP2B-203ENST00000471660 GBP4Q96PP9 640 aa13.39□□□□□ -0.27
CHMP2B-203ENST00000471660 CDK11BP21127 795 aaKnown RBP13.38□□□□□ -0.27
CHMP2B-203ENST00000471660 SF3B2Q13435 895 aaKnown RBP13.38□□□□□ -0.27
CHMP2B-203ENST00000471660 C19orf44Q9H6X5 657 aa13.38□□□□□ -0.27
CHMP2B-203ENST00000471660 BRWD3Q6RI45 1802 aa13.37□□□□□ -0.27
CHMP2B-203ENST00000471660 PLEKHG1Q9ULL1 1385 aa13.37□□□□□ -0.27
CHMP2B-203ENST00000471660 XPCQ01831 940 aaPredicted RBP13.37□□□□□ -0.27
CHMP2B-203ENST00000471660 PLCD3Q8N3E9 789 aa13.37□□□□□ -0.27
CHMP2B-203ENST00000471660 HSP90AB1P08238 724 aaKnown RBP13.37□□□□□ -0.27
CHMP2B-203ENST00000471660 NCBP3Q53F19 620 aaKnown RBP13.37□□□□□ -0.27
CHMP2B-203ENST00000471660 RGL3Q3MIN7 710 aa13.36□□□□□ -0.27
CHMP2B-203ENST00000471660 ARID3AQ99856 593 aa13.36□□□□□ -0.27
CHMP2B-203ENST00000471660 PRIMPOLQ96LW4 560 aa13.36□□□□□ -0.27
CHMP2B-203ENST00000471660 PIK3R4Q99570 1358 aa13.35□□□□□ -0.27
CHMP2B-203ENST00000471660 DNTTIP2Q5QJE6 756 aaKnown RBP13.35□□□□□ -0.27
CHMP2B-203ENST00000471660 DEFB132Q7Z7B7 95 aa13.35□□□□□ -0.27
CHMP2B-203ENST00000471660 RGPD1P0DJD0 1748 aa13.35□□□□□ -0.27
CHMP2B-203ENST00000471660 MST1RQ04912 1400 aa13.35□□□□□ -0.27
CHMP2B-203ENST00000471660 ZNF445P59923 1031 aa13.35□□□□□ -0.27
CHMP2B-203ENST00000471660 CBX1P83916 185 aa13.35□□□□□ -0.27
CHMP2B-203ENST00000471660 DUSP27Q5VZP5 1158 aa13.35□□□□□ -0.27
CHMP2B-203ENST00000471660 ZNF710Q8N1W2 664 aa13.35□□□□□ -0.27
CHMP2B-203ENST00000471660 DNAJC2Q99543 621 aaKnown RBP13.35□□□□□ -0.27
CHMP2B-203ENST00000471660 NINLQ9Y2I6 1382 aa13.34□□□□□ -0.27
CHMP2B-203ENST00000471660 PSDA5PKW4 1024 aaPredicted RBP13.34□□□□□ -0.27
CHMP2B-203ENST00000471660 PER1O15534 1290 aaPredicted RBP13.34□□□□□ -0.27
CHMP2B-203ENST00000471660 RAB3GAP1Q15042 981 aa13.34□□□□□ -0.27
CHMP2B-203ENST00000471660 CLEC17AQ6ZS10 378 aa13.34□□□□□ -0.27
CHMP2B-203ENST00000471660 TNPO1Q92973 898 aaKnown RBP13.34□□□□□ -0.27
CHMP2B-203ENST00000471660 IGHDP01880 384 aa13.33□□□□□ -0.28
CHMP2B-203ENST00000471660 IRX3P78415 501 aaPredicted RBP13.33□□□□□ -0.28
CHMP2B-203ENST00000471660 HMGN5P82970 282 aaKnown RBP13.33□□□□□ -0.28
CHMP2B-203ENST00000471660 NBPF1Q3BBV0 1214 aa13.33□□□□□ -0.28
CHMP2B-203ENST00000471660 C14orf37Q86TY3 774 aa13.33□□□□□ -0.28
CHMP2B-203ENST00000471660 RGS22Q8NE09 1264 aa13.33□□□□□ -0.28
CHMP2B-203ENST00000471660 SLC52A1Q9NWF4 448 aa13.33□□□□□ -0.28
CHMP2B-203ENST00000471660 GLI3P10071 1580 aa13.33□□□□□ -0.28
CHMP2B-203ENST00000471660 DCAF8L1A6NGE4 600 aa13.33□□□□□ -0.28
CHMP2B-203ENST00000471660 ATP2B3Q16720 1220 aa13.33□□□□□ -0.28
CHMP2B-203ENST00000471660 SMC5Q8IY18 1101 aa13.33□□□□□ -0.28
CHMP2B-203ENST00000471660 IRX5P78411 483 aaPredicted RBP13.32□□□□□ -0.28
CHMP2B-203ENST00000471660 KLHL40Q2TBA0 621 aa13.32□□□□□ -0.28
CHMP2B-203ENST00000471660 PANK3Q9H999 370 aa13.32□□□□□ -0.28
CHMP2B-203ENST00000471660 CGNQ9P2M7 1197 aaKnown RBP13.32□□□□□ -0.28
CHMP2B-203ENST00000471660 CCDC39Q9UFE4 941 aa13.32□□□□□ -0.28
CHMP2B-203ENST00000471660 STAG3Q9UJ98 1225 aa13.32□□□□□ -0.28
CHMP2B-203ENST00000471660 PIK3C2GO75747 1445 aa13.31□□□□□ -0.28
CHMP2B-203ENST00000471660 CGNL1Q0VF96 1302 aa13.31□□□□□ -0.28
CHMP2B-203ENST00000471660 ZNF521Q96K83 1311 aa13.31□□□□□ -0.28
Retrieved 100 of 20,778 RNA–protein pairs in 49.5 ms