RNA–Protein interactions for RNA: ENST00000471357.1

LINC00880-201, long intergenic non-protein coding RNA 880, humanhuman

TSL 1 (best) BASIC

Gene LINC00880, Length 2,018 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00880-201ENST00000471357 NEUROD2Q15784 382 aa15.75■□□□□ 0.11
LINC00880-201ENST00000471357 NFAT5O94916 1531 aa15.75■□□□□ 0.11
LINC00880-201ENST00000471357 NEFMP07197 916 aa15.74■□□□□ 0.11
LINC00880-201ENST00000471357 PRKAR2BP31323 418 aa15.74■□□□□ 0.11
LINC00880-201ENST00000471357 GOLGA2Q08379 1002 aa15.74■□□□□ 0.11
LINC00880-201ENST00000471357 RRP7AQ9Y3A4 280 aaKnown RBP15.74■□□□□ 0.11
LINC00880-201ENST00000471357 RTL1A6NKG5 1358 aa15.74■□□□□ 0.11
LINC00880-201ENST00000471357 TNS3Q68CZ2 1445 aa15.74■□□□□ 0.11
LINC00880-201ENST00000471357 SPATA31A3Q5VYP0 1347 aa15.73■□□□□ 0.11
LINC00880-201ENST00000471357 PLEKHG5O94827 1062 aa15.73■□□□□ 0.11
LINC00880-201ENST00000471357 CCDC27Q2M243 656 aa15.73■□□□□ 0.11
LINC00880-201ENST00000471357 WWC1Q8IX03 1113 aa15.73■□□□□ 0.11
LINC00880-201ENST00000471357 IP6K1Q92551 441 aa15.73■□□□□ 0.11
LINC00880-201ENST00000471357 SOS2Q07890 1332 aaPredicted RBP15.72■□□□□ 0.11
LINC00880-201ENST00000471357 TMPOP42166 694 aaKnown RBP15.72■□□□□ 0.11
LINC00880-201ENST00000471357 ARHGEF10O15013 1369 aa15.72■□□□□ 0.11
LINC00880-201ENST00000471357 ARHGEF25Q86VW2 580 aa15.72■□□□□ 0.11
LINC00880-201ENST00000471357 SULT6B1Q6IMI4 303 aa15.71■□□□□ 0.11
LINC00880-201ENST00000471357 SUPT16HQ9Y5B9 1047 aaKnown RBP15.71■□□□□ 0.11
LINC00880-201ENST00000471357 ZBTB7CA1YPR0 619 aa15.7■□□□□ 0.1
LINC00880-201ENST00000471357 LTN1O94822 1766 aa15.7■□□□□ 0.1
LINC00880-201ENST00000471357 SLFN5Q08AF3 891 aa15.7■□□□□ 0.1
LINC00880-201ENST00000471357 MED1Q15648 1581 aaPredicted RBP15.69■□□□□ 0.1
LINC00880-201ENST00000471357 PHACTR3Q96KR7 559 aa15.69■□□□□ 0.1
LINC00880-201ENST00000471357 RIPK4P57078 832 aa15.68■□□□□ 0.1
LINC00880-201ENST00000471357 AEBP1Q8IUX7 1158 aa15.68■□□□□ 0.1
LINC00880-201ENST00000471357 WDR63Q8IWG1 891 aa15.68■□□□□ 0.1
LINC00880-201ENST00000471357 EYA1Q99502 592 aa15.68■□□□□ 0.1
LINC00880-201ENST00000471357 RGPD1P0DJD0 1748 aa15.68■□□□□ 0.1
LINC00880-201ENST00000471357 IGSF1Q8N6C5 1336 aa15.68■□□□□ 0.1
LINC00880-201ENST00000471357 E9PSI1 815 aa15.68■□□□□ 0.1
LINC00880-201ENST00000471357 PHRF1Q9P1Y6 1649 aaKnown RBP15.68■□□□□ 0.1
LINC00880-201ENST00000471357 DUSP27Q5VZP5 1158 aa15.67■□□□□ 0.1
LINC00880-201ENST00000471357 TRMT2AQ8IZ69 625 aaKnown RBP15.67■□□□□ 0.1
LINC00880-201ENST00000471357 LTV1Q96GA3 475 aaPredicted RBP15.67■□□□□ 0.1
LINC00880-201ENST00000471357 ZC3H6P61129 1189 aaKnown RBP15.67■□□□□ 0.1
LINC00880-201ENST00000471357 NFE2L2Q16236 605 aa15.67■□□□□ 0.1
LINC00880-201ENST00000471357 CABLES1Q8TDN4 633 aa15.67■□□□□ 0.1
LINC00880-201ENST00000471357 SPINK5Q9NQ38 1064 aaPredicted RBP15.67■□□□□ 0.1
LINC00880-201ENST00000471357 NHSL1Q5SYE7 1610 aa15.66■□□□□ 0.1
LINC00880-201ENST00000471357 TRIM35Q9UPQ4 493 aa15.66■□□□□ 0.1
LINC00880-201ENST00000471357 KDRP35968 1356 aa15.65■□□□□ 0.1
LINC00880-201ENST00000471357 NEFLP07196 543 aa15.65■□□□□ 0.1
LINC00880-201ENST00000471357 RCAN3Q9UKA8 241 aa15.63■□□□□ 0.09
LINC00880-201ENST00000471357 AXIN2Q9Y2T1 843 aa15.63■□□□□ 0.09
LINC00880-201ENST00000471357 ROBO1Q9Y6N7 1651 aa15.62■□□□□ 0.09
LINC00880-201ENST00000471357 TOM1O60784 492 aa15.61■□□□□ 0.09
LINC00880-201ENST00000471357 ANKRD24Q8TF21 1146 aa15.61■□□□□ 0.09
LINC00880-201ENST00000471357 CRYBG1Q9Y4K1 1723 aa15.61■□□□□ 0.09
LINC00880-201ENST00000471357 LMOD3Q0VAK6 560 aa15.61■□□□□ 0.09
LINC00880-201ENST00000471357 FKBP8Q14318 412 aa15.61■□□□□ 0.09
LINC00880-201ENST00000471357 NBPF6Q5VWK0 638 aa15.61■□□□□ 0.09
LINC00880-201ENST00000471357 LRRC59Q96AG4 307 aaKnown RBP15.61■□□□□ 0.09
LINC00880-201ENST00000471357 NBPF4Q96M43 638 aa15.61■□□□□ 0.09
LINC00880-201ENST00000471357 IL16Q14005 1332 aa15.61■□□□□ 0.09
LINC00880-201ENST00000471357 CPDO75976 1380 aa15.61■□□□□ 0.09
LINC00880-201ENST00000471357 MYH16Q9H6N6 1097 aa15.6■□□□□ 0.09
LINC00880-201ENST00000471357 HAP1P54257 671 aaPredicted RBP15.6■□□□□ 0.09
LINC00880-201ENST00000471357 RNF123Q5XPI4 1314 aa15.6■□□□□ 0.09
LINC00880-201ENST00000471357 KIAA0232Q92628 1395 aa15.59■□□□□ 0.09
LINC00880-201ENST00000471357 AHDC1Q5TGY3 1603 aaPredicted RBP15.59■□□□□ 0.09
LINC00880-201ENST00000471357 USHBP1Q8N6Y0 703 aa15.59■□□□□ 0.09
LINC00880-201ENST00000471357 CALD1Q05682 793 aaKnown RBP15.58■□□□□ 0.09
LINC00880-201ENST00000471357 CHRNA2Q15822 529 aa15.58■□□□□ 0.08
LINC00880-201ENST00000471357 MTHFSDQ2M296 383 aaKnown RBP15.58■□□□□ 0.08
LINC00880-201ENST00000471357 GAS2L2Q8NHY3 880 aa15.58■□□□□ 0.08
LINC00880-201ENST00000471357 ERBB3P21860 1342 aa15.58■□□□□ 0.08
LINC00880-201ENST00000471357 ABCC6O95255 1503 aa15.57■□□□□ 0.08
LINC00880-201ENST00000471357 COL18A1P39060 1754 aa15.57■□□□□ 0.08
LINC00880-201ENST00000471357 PRDM11Q9NQV5 511 aa15.56■□□□□ 0.08
LINC00880-201ENST00000471357 RGPD5Q99666 1765 aa15.56■□□□□ 0.08
LINC00880-201ENST00000471357 DLG5Q8TDM6 1919 aa15.56■□□□□ 0.08
LINC00880-201ENST00000471357 FAM83GA6ND36 823 aa15.55■□□□□ 0.08
LINC00880-201ENST00000471357 PIP4K2BP78356 416 aa15.55■□□□□ 0.08
LINC00880-201ENST00000471357 THUMPD2Q9BTF0 503 aaKnown RBP15.55■□□□□ 0.08
LINC00880-201ENST00000471357 NCAPD2Q15021 1401 aa15.55■□□□□ 0.08
LINC00880-201ENST00000471357 IRX6P78412 446 aaPredicted RBP15.55■□□□□ 0.08
LINC00880-201ENST00000471357 FANCIQ9NVI1 1328 aa15.54■□□□□ 0.08
LINC00880-201ENST00000471357 RGPD2P0DJD1 1756 aa15.54■□□□□ 0.08
LINC00880-201ENST00000471357 UBAP1LF5GYI3 381 aa15.54■□□□□ 0.08
LINC00880-201ENST00000471357 RRP1P56182 461 aaKnown RBP15.54■□□□□ 0.08
LINC00880-201ENST00000471357 TSR2Q969E8 191 aaKnown RBP15.54■□□□□ 0.08
LINC00880-201ENST00000471357 CSB-PGBD3P0DP91 1061 aa15.53■□□□□ 0.08
LINC00880-201ENST00000471357 DCTN1Q14203 1278 aa15.53■□□□□ 0.08
LINC00880-201ENST00000471357 RTF1Q92541 710 aaKnown RBP15.53■□□□□ 0.08
LINC00880-201ENST00000471357 ABCA3Q99758 1704 aa15.53■□□□□ 0.08
LINC00880-201ENST00000471357 GNAI1P63096 354 aa15.53■□□□□ 0.08
LINC00880-201ENST00000471357 IFT57Q9NWB7 429 aa15.53■□□□□ 0.08
LINC00880-201ENST00000471357 NLRP2Q9NX02 1062 aa15.53■□□□□ 0.08
LINC00880-201ENST00000471357 CAMTA1Q9Y6Y1 1673 aa15.52■□□□□ 0.08
LINC00880-201ENST00000471357 HTATSF1O43719 755 aaKnown RBP15.52■□□□□ 0.08
LINC00880-201ENST00000471357 LAS1LQ9Y4W2 734 aaKnown RBP15.52■□□□□ 0.08
LINC00880-201ENST00000471357 ZNF853P0CG23 659 aa15.51■□□□□ 0.07
LINC00880-201ENST00000471357 MCM10Q7L590 875 aa15.51■□□□□ 0.07
LINC00880-201ENST00000471357 GNAT3A8MTJ3 354 aa15.51■□□□□ 0.07
LINC00880-201ENST00000471357 PLEKHO1Q53GL0 409 aaPredicted RBP15.51■□□□□ 0.07
LINC00880-201ENST00000471357 ERICH6BQ5W0A0 696 aa15.51■□□□□ 0.07
LINC00880-201ENST00000471357 CFAP44Q96MT7 982 aa15.51■□□□□ 0.07
LINC00880-201ENST00000471357 PHLPP1O60346 1717 aa15.51■□□□□ 0.07
LINC00880-201ENST00000471357 EXOSC9Q06265 439 aaKnown RBP15.5■□□□□ 0.07
Retrieved 100 of 20,778 RNA–protein pairs in 49.8 ms