RNA–Protein interactions for RNA: ENST00000470972.5

SLC44A1-205, Transcript of solute carrier family 44 member 1, humanhuman

TSL 1 (best)

Gene SLC44A1, Length 10,433 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SLC44A1-205ENST00000470972 ZNF76P36508 570 aa13.48□□□□□ -0.25
SLC44A1-205ENST00000470972 CCDC158Q5M9N0 1113 aa13.48□□□□□ -0.25
SLC44A1-205ENST00000470972 CYP46A1Q9Y6A2 500 aa13.48□□□□□ -0.25
SLC44A1-205ENST00000470972 DDX24Q9GZR7 859 aaKnown RBP eCLIP13.48□□□□□ -0.25
SLC44A1-205ENST00000470972 JAKMIP3Q5VZ66 844 aa13.47□□□□□ -0.25
SLC44A1-205ENST00000470972 TAF4BQ92750 862 aa13.47□□□□□ -0.25
SLC44A1-205ENST00000470972 CBFA2T2O43439 604 aa13.47□□□□□ -0.25
SLC44A1-205ENST00000470972 GGNBP2Q9H3C7 697 aa13.47□□□□□ -0.25
SLC44A1-205ENST00000470972 PRDM10Q9NQV6 1147 aa13.47□□□□□ -0.25
SLC44A1-205ENST00000470972 DESP17661 470 aa13.47□□□□□ -0.25
SLC44A1-205ENST00000470972 STRN4Q9NRL3 753 aa13.47□□□□□ -0.25
SLC44A1-205ENST00000470972 PUS7Q96PZ0 661 aaKnown RBP13.47□□□□□ -0.25
SLC44A1-205ENST00000470972 EIF5P55010 431 aaKnown RBP13.47□□□□□ -0.25
SLC44A1-205ENST00000470972 AEBP2Q6ZN18 517 aaPredicted RBP13.47□□□□□ -0.25
SLC44A1-205ENST00000470972 CCDC30Q5VVM6 783 aa13.46□□□□□ -0.25
SLC44A1-205ENST00000470972 UBE4AQ14139 1066 aa13.46□□□□□ -0.25
SLC44A1-205ENST00000470972 ERC1Q8IUD2 1116 aa13.46□□□□□ -0.25
SLC44A1-205ENST00000470972 DNA2P51530 1060 aa13.46□□□□□ -0.25
SLC44A1-205ENST00000470972 BCCIPQ9P287 314 aaKnown RBP eCLIP13.46□□□□□ -0.26
SLC44A1-205ENST00000470972 EPB41L2O43491 1005 aaKnown RBP13.46□□□□□ -0.26
SLC44A1-205ENST00000470972 USP5P45974 858 aa13.46□□□□□ -0.26
SLC44A1-205ENST00000470972 TMX1Q9H3N1 280 aa13.46□□□□□ -0.26
SLC44A1-205ENST00000470972 WASHC2AQ641Q2 1341 aa13.46□□□□□ -0.26
SLC44A1-205ENST00000470972 FKBP4Q02790 459 aaKnown RBP eCLIP13.45□□□□□ -0.26
SLC44A1-205ENST00000470972 USP8P40818 1118 aa13.45□□□□□ -0.26
SLC44A1-205ENST00000470972 FILIP1Q7Z7B0 1213 aa13.45□□□□□ -0.26
SLC44A1-205ENST00000470972 PDZRN3Q9UPQ7 1066 aa13.45□□□□□ -0.26
SLC44A1-205ENST00000470972 LARP1BQ659C4 914 aaKnown RBP13.44□□□□□ -0.26
SLC44A1-205ENST00000470972 NOL7Q9UMY1 257 aaKnown RBP13.44□□□□□ -0.26
SLC44A1-205ENST00000470972 TMCO3Q6UWJ1 677 aa13.44□□□□□ -0.26
SLC44A1-205ENST00000470972 TTC16Q8NEE8 873 aa13.44□□□□□ -0.26
SLC44A1-205ENST00000470972 TDRD9Q8NDG6 1382 aaKnown RBP13.44□□□□□ -0.26
SLC44A1-205ENST00000470972 ZSCAN29Q8IWY8 852 aaPredicted RBP13.44□□□□□ -0.26
SLC44A1-205ENST00000470972 CEP57L1Q8IYX8 460 aa13.44□□□□□ -0.26
SLC44A1-205ENST00000470972 CTNNBL1Q8WYA6 563 aaPredicted RBP13.44□□□□□ -0.26
SLC44A1-205ENST00000470972 SPATA32Q96LK8 384 aa13.44□□□□□ -0.26
SLC44A1-205ENST00000470972 NOB1Q9ULX3 412 aaKnown RBP13.44□□□□□ -0.26
SLC44A1-205ENST00000470972 CCDC148Q8NFR7 591 aa13.44□□□□□ -0.26
SLC44A1-205ENST00000470972 NACAP1Q9BZK3 213 aa13.44□□□□□ -0.26
SLC44A1-205ENST00000470972 TNNT1P13805 278 aa13.43□□□□□ -0.26
SLC44A1-205ENST00000470972 CAMK4Q16566 473 aa13.43□□□□□ -0.26
SLC44A1-205ENST00000470972 PODXL2Q9NZ53 605 aa13.43□□□□□ -0.26
SLC44A1-205ENST00000470972 GNAI2P04899 355 aa13.43□□□□□ -0.26
SLC44A1-205ENST00000470972 MYL6BP14649 208 aa13.43□□□□□ -0.26
SLC44A1-205ENST00000470972 AEBP1Q8IUX7 1158 aa13.43□□□□□ -0.26
SLC44A1-205ENST00000470972 KRT85P78386 507 aa13.43□□□□□ -0.26
SLC44A1-205ENST00000470972 TDO2P48775 406 aa13.43□□□□□ -0.26
SLC44A1-205ENST00000470972 MCM2P49736 904 aa13.43□□□□□ -0.26
SLC44A1-205ENST00000470972 SERPINA10Q9UK55 444 aa13.43□□□□□ -0.26
SLC44A1-205ENST00000470972 GNAI3P08754 354 aa13.43□□□□□ -0.26
SLC44A1-205ENST00000470972 CCDC178Q5BJE1 867 aa13.43□□□□□ -0.26
SLC44A1-205ENST00000470972 RNF187Q5TA31 235 aaPredicted RBP13.43□□□□□ -0.26
SLC44A1-205ENST00000470972 BMP2KQ9NSY1 1161 aaPredicted RBP13.43□□□□□ -0.26
SLC44A1-205ENST00000470972 GRPEL1Q9HAV7 217 aa13.42□□□□□ -0.26
SLC44A1-205ENST00000470972 STAMBPO95630 424 aa13.42□□□□□ -0.26
SLC44A1-205ENST00000470972 ARHGAP29Q52LW3 1261 aa13.42□□□□□ -0.26
SLC44A1-205ENST00000470972 MIA2Q96PC5 1412 aa13.42□□□□□ -0.26
SLC44A1-205ENST00000470972 TRERF1Q96PN7 1200 aa13.42□□□□□ -0.26
SLC44A1-205ENST00000470972 UPF3BQ9BZI7 483 aaKnown RBP13.42□□□□□ -0.26
SLC44A1-205ENST00000470972 ZFP91Q96JP5 570 aaPredicted RBP13.42□□□□□ -0.26
SLC44A1-205ENST00000470972 CRACR2AQ9BSW2 395 aa13.41□□□□□ -0.26
SLC44A1-205ENST00000470972 MACROD2A1Z1Q3 448 aa13.41□□□□□ -0.26
SLC44A1-205ENST00000470972 DHX8Q14562 1220 aaKnown RBP13.41□□□□□ -0.26
SLC44A1-205ENST00000470972 CCDC57Q2TAC2 916 aa13.41□□□□□ -0.26
SLC44A1-205ENST00000470972 NLRP6P59044 892 aa13.41□□□□□ -0.26
SLC44A1-205ENST00000470972 ANKRD1Q15327 319 aa13.41□□□□□ -0.26
SLC44A1-205ENST00000470972 ABTB2Q8N961 1025 aa13.41□□□□□ -0.26
SLC44A1-205ENST00000470972 WDR33Q9C0J8 1336 aaKnown RBP13.41□□□□□ -0.26
SLC44A1-205ENST00000470972 IFFO1Q0D2I5 559 aa13.41□□□□□ -0.26
SLC44A1-205ENST00000470972 CNTLNQ9NXG0 1405 aa13.41□□□□□ -0.26
SLC44A1-205ENST00000470972 RAI14Q9P0K7 980 aa13.41□□□□□ -0.26
SLC44A1-205ENST00000470972 GSTTP1A0A1W2PQM5 241 aa13.41□□□□□ -0.26
SLC44A1-205ENST00000470972 SCLT1Q96NL6 688 aa13.41□□□□□ -0.26
SLC44A1-205ENST00000470972 UBA5Q9GZZ9 404 aa13.41□□□□□ -0.26
SLC44A1-205ENST00000470972 ZNF397Q8NF99 534 aaPredicted RBP13.41□□□□□ -0.26
SLC44A1-205ENST00000470972 DDX11Q96FC9 970 aa13.41□□□□□ -0.26
SLC44A1-205ENST00000470972 POTEJP0CG39 1038 aa13.41□□□□□ -0.26
SLC44A1-205ENST00000470972 MPHOSPH8Q99549 860 aa13.41□□□□□ -0.26
SLC44A1-205ENST00000470972 SHTN1A0MZ66 631 aa13.4□□□□□ -0.26
SLC44A1-205ENST00000470972 UBAC1Q9BSL1 405 aa13.4□□□□□ -0.26
SLC44A1-205ENST00000470972 CASQ1P31415 396 aa13.4□□□□□ -0.26
SLC44A1-205ENST00000470972 CFAP100Q494V2 611 aa13.4□□□□□ -0.26
SLC44A1-205ENST00000470972 MYCNP04198 464 aaPredicted RBP13.4□□□□□ -0.26
SLC44A1-205ENST00000470972 KLHL10Q6JEL2 608 aa13.4□□□□□ -0.26
SLC44A1-205ENST00000470972 AACSQ86V21 672 aa13.4□□□□□ -0.26
SLC44A1-205ENST00000470972 NUP62CLQ9H1M0 184 aa13.4□□□□□ -0.26
SLC44A1-205ENST00000470972 JAKMIP1Q96N16 626 aaKnown RBP13.4□□□□□ -0.26
SLC44A1-205ENST00000470972 POLR3GO15318 223 aaPredicted RBP13.39□□□□□ -0.27
SLC44A1-205ENST00000470972 PDRG1Q9NUG6 133 aa13.39□□□□□ -0.27
SLC44A1-205ENST00000470972 COMMD10Q9Y6G5 202 aa13.39□□□□□ -0.27
SLC44A1-205ENST00000470972 BAZ1AQ9NRL2 1556 aaPredicted RBP13.39□□□□□ -0.27
SLC44A1-205ENST00000470972 CWC27Q6UX04 472 aaKnown RBP13.39□□□□□ -0.27
SLC44A1-205ENST00000470972 GPATCH11Q8N954 259 aa13.39□□□□□ -0.27
SLC44A1-205ENST00000470972 TSR2Q969E8 191 aaKnown RBP13.39□□□□□ -0.27
SLC44A1-205ENST00000470972 K7ELQ4 463 aaPredicted RBP13.39□□□□□ -0.27
SLC44A1-205ENST00000470972 TRIM21P19474 475 aaKnown RBP13.39□□□□□ -0.27
SLC44A1-205ENST00000470972 RSPH4AQ5TD94 716 aa13.39□□□□□ -0.27
SLC44A1-205ENST00000470972 PDCL2Q8N4E4 241 aa13.39□□□□□ -0.27
SLC44A1-205ENST00000470972 CBX1P83916 185 aa13.38□□□□□ -0.27
SLC44A1-205ENST00000470972 SPA17Q15506 151 aa13.38□□□□□ -0.27
Retrieved 100 of 20,778 RNA–protein pairs in 17.4 ms