RNA–Protein interactions for RNA: ENST00000470776.1

LMCD1-207, Transcript of LIM and cysteine rich domains 1, humanhuman

TSL 2

Gene LMCD1, Length 579 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LMCD1-207ENST00000470776 PNNQ9H307 717 aaKnown RBP11.81□□□□□ -0.52
LMCD1-207ENST00000470776 HOXC9P31274 260 aa11.8□□□□□ -0.52
LMCD1-207ENST00000470776 PDE3BQ13370 1112 aa11.8□□□□□ -0.52
LMCD1-207ENST00000470776 HSP90AB2PQ58FF8 381 aa11.8□□□□□ -0.52
LMCD1-207ENST00000470776 MAP2P11137 1827 aaKnown RBP11.8□□□□□ -0.52
LMCD1-207ENST00000470776 PEAK1Q9H792 1746 aa11.8□□□□□ -0.52
LMCD1-207ENST00000470776 MED1Q15648 1581 aaPredicted RBP11.79□□□□□ -0.52
LMCD1-207ENST00000470776 NHSL1Q5SYE7 1610 aa11.79□□□□□ -0.52
LMCD1-207ENST00000470776 PHRF1Q9P1Y6 1649 aaKnown RBP11.79□□□□□ -0.52
LMCD1-207ENST00000470776 APAF1O14727 1248 aa11.79□□□□□ -0.52
LMCD1-207ENST00000470776 AMPHP49418 695 aa11.79□□□□□ -0.52
LMCD1-207ENST00000470776 RSPH6AQ9H0K4 717 aa11.79□□□□□ -0.52
LMCD1-207ENST00000470776 ZNF521Q96K83 1311 aa11.79□□□□□ -0.52
LMCD1-207ENST00000470776 U2SURPO15042 1029 aaKnown RBP11.78□□□□□ -0.52
LMCD1-207ENST00000470776 CCDC146Q8IYE0 955 aa11.78□□□□□ -0.52
LMCD1-207ENST00000470776 AHDC1Q5TGY3 1603 aaPredicted RBP11.78□□□□□ -0.52
LMCD1-207ENST00000470776 SOX12O15370 315 aa11.77□□□□□ -0.53
LMCD1-207ENST00000470776 CCDC27Q2M243 656 aa11.77□□□□□ -0.53
LMCD1-207ENST00000470776 LMOD2Q6P5Q4 547 aa11.77□□□□□ -0.53
LMCD1-207ENST00000470776 TCP11L2Q8N4U5 519 aa11.77□□□□□ -0.53
LMCD1-207ENST00000470776 CPDO75976 1380 aa11.77□□□□□ -0.53
LMCD1-207ENST00000470776 LRRC59Q96AG4 307 aaKnown RBP11.76□□□□□ -0.53
LMCD1-207ENST00000470776 IGSF1Q8N6C5 1336 aa11.76□□□□□ -0.53
LMCD1-207ENST00000470776 KDRP35968 1356 aa11.76□□□□□ -0.53
LMCD1-207ENST00000470776 ABCC6O95255 1503 aa11.75□□□□□ -0.53
LMCD1-207ENST00000470776 RGPD1P0DJD0 1748 aa11.74□□□□□ -0.53
LMCD1-207ENST00000470776 EYA1Q99502 592 aa11.74□□□□□ -0.53
LMCD1-207ENST00000470776 SRCAPQ6ZRS2 3230 aa11.74□□□□□ -0.53
LMCD1-207ENST00000470776 ROBO1Q9Y6N7 1651 aa11.74□□□□□ -0.53
LMCD1-207ENST00000470776 PRKAR2BP31323 418 aa11.73□□□□□ -0.53
LMCD1-207ENST00000470776 TMPOP42166 694 aaKnown RBP11.73□□□□□ -0.53
LMCD1-207ENST00000470776 NCAPD2Q15021 1401 aa11.73□□□□□ -0.53
LMCD1-207ENST00000470776 WWC1Q8IX03 1113 aa11.73□□□□□ -0.53
LMCD1-207ENST00000470776 TRMT2AQ8IZ69 625 aaKnown RBP11.73□□□□□ -0.53
LMCD1-207ENST00000470776 CRYBG1Q9Y4K1 1723 aa11.73□□□□□ -0.53
LMCD1-207ENST00000470776 MAPK8IP3Q9UPT6 1336 aa11.72□□□□□ -0.53
LMCD1-207ENST00000470776 HMOX1P09601 288 aa11.72□□□□□ -0.53
LMCD1-207ENST00000470776 SULT6B1Q6IMI4 303 aa11.72□□□□□ -0.53
LMCD1-207ENST00000470776 WDR63Q8IWG1 891 aa11.72□□□□□ -0.53
LMCD1-207ENST00000470776 CABLES1Q8TDN4 633 aa11.72□□□□□ -0.53
LMCD1-207ENST00000470776 AXIN2Q9Y2T1 843 aa11.72□□□□□ -0.53
LMCD1-207ENST00000470776 ZC3H6P61129 1189 aaKnown RBP11.71□□□□□ -0.53
LMCD1-207ENST00000470776 GOLGA2Q08379 1002 aa11.71□□□□□ -0.53
LMCD1-207ENST00000470776 NFE2L2Q16236 605 aa11.71□□□□□ -0.53
LMCD1-207ENST00000470776 PHACTR3Q96KR7 559 aa11.71□□□□□ -0.53
LMCD1-207ENST00000470776 SALL2Q9Y467 1007 aaPredicted RBP11.71□□□□□ -0.53
LMCD1-207ENST00000470776 SUPT16HQ9Y5B9 1047 aaKnown RBP11.71□□□□□ -0.53
LMCD1-207ENST00000470776 NEFMP07197 916 aa11.7□□□□□ -0.54
LMCD1-207ENST00000470776 SLFN5Q08AF3 891 aa11.7□□□□□ -0.54
LMCD1-207ENST00000470776 AEBP1Q8IUX7 1158 aa11.7□□□□□ -0.54
LMCD1-207ENST00000470776 TRIM35Q9UPQ4 493 aa11.7□□□□□ -0.54
LMCD1-207ENST00000470776 LTN1O94822 1766 aa11.69□□□□□ -0.54
LMCD1-207ENST00000470776 COL18A1P39060 1754 aa11.69□□□□□ -0.54
LMCD1-207ENST00000470776 KIAA0232Q92628 1395 aa11.69□□□□□ -0.54
LMCD1-207ENST00000470776 ERBB3P21860 1342 aa11.69□□□□□ -0.54
LMCD1-207ENST00000470776 SENP3-EIF4A1A0A087X0R7 540 aa11.69□□□□□ -0.54
LMCD1-207ENST00000470776 NEFLP07196 543 aa11.69□□□□□ -0.54
LMCD1-207ENST00000470776 NBPF6Q5VWK0 638 aa11.69□□□□□ -0.54
LMCD1-207ENST00000470776 ANKRD24Q8TF21 1146 aa11.69□□□□□ -0.54
LMCD1-207ENST00000470776 CDCA7LQ96GN5 454 aa11.69□□□□□ -0.54
LMCD1-207ENST00000470776 NBPF4Q96M43 638 aa11.69□□□□□ -0.54
LMCD1-207ENST00000470776 COL22A1Q8NFW1 1626 aaPredicted RBP11.68□□□□□ -0.54
LMCD1-207ENST00000470776 IL16Q14005 1332 aa11.68□□□□□ -0.54
LMCD1-207ENST00000470776 E9PSI1 815 aa11.68□□□□□ -0.54
LMCD1-207ENST00000470776 RIPK4P57078 832 aa11.68□□□□□ -0.54
LMCD1-207ENST00000470776 DUSP27Q5VZP5 1158 aa11.68□□□□□ -0.54
LMCD1-207ENST00000470776 RRP7AQ9Y3A4 280 aaKnown RBP11.68□□□□□ -0.54
LMCD1-207ENST00000470776 COL16A1Q07092 1604 aaPredicted RBP11.68□□□□□ -0.54
LMCD1-207ENST00000470776 PLEKHG2Q9H7P9 1386 aa11.67□□□□□ -0.54
LMCD1-207ENST00000470776 LTV1Q96GA3 475 aaPredicted RBP11.67□□□□□ -0.54
LMCD1-207ENST00000470776 CAMTA1Q9Y6Y1 1673 aa11.66□□□□□ -0.54
LMCD1-207ENST00000470776 LMOD3Q0VAK6 560 aa11.66□□□□□ -0.54
LMCD1-207ENST00000470776 NEUROD2Q15784 382 aa11.66□□□□□ -0.54
LMCD1-207ENST00000470776 SPINK5Q9NQ38 1064 aaPredicted RBP11.66□□□□□ -0.54
LMCD1-207ENST00000470776 PRDM11Q9NQV5 511 aa11.66□□□□□ -0.54
LMCD1-207ENST00000470776 PHLPP1O60346 1717 aa11.66□□□□□ -0.54
LMCD1-207ENST00000470776 LMO7Q8WWI1 1683 aa11.65□□□□□ -0.54
LMCD1-207ENST00000470776 ZBTB7CA1YPR0 619 aa11.65□□□□□ -0.54
LMCD1-207ENST00000470776 FAM83GA6ND36 823 aa11.65□□□□□ -0.54
LMCD1-207ENST00000470776 HTATSF1O43719 755 aaKnown RBP11.65□□□□□ -0.54
LMCD1-207ENST00000470776 PLEKHG5O94827 1062 aa11.65□□□□□ -0.54
LMCD1-207ENST00000470776 CHRNA2Q15822 529 aa11.65□□□□□ -0.54
LMCD1-207ENST00000470776 MTHFSDQ2M296 383 aaKnown RBP11.65□□□□□ -0.54
LMCD1-207ENST00000470776 GAS2L2Q8NHY3 880 aa11.65□□□□□ -0.54
LMCD1-207ENST00000470776 ABCA3Q99758 1704 aa11.65□□□□□ -0.54
LMCD1-207ENST00000470776 HAP1P54257 671 aaPredicted RBP11.64□□□□□ -0.55
LMCD1-207ENST00000470776 RNF123Q5XPI4 1314 aa11.63□□□□□ -0.55
LMCD1-207ENST00000470776 WDR17Q8IZU2 1322 aa11.63□□□□□ -0.55
LMCD1-207ENST00000470776 CALD1Q05682 793 aaKnown RBP11.63□□□□□ -0.55
LMCD1-207ENST00000470776 ERICH6BQ5W0A0 696 aa11.63□□□□□ -0.55
LMCD1-207ENST00000470776 COL5A2P05997 1499 aaPredicted RBP11.63□□□□□ -0.55
LMCD1-207ENST00000470776 ZNF853P0CG23 659 aa11.62□□□□□ -0.55
LMCD1-207ENST00000470776 AMOTQ4VCS5 1084 aa11.62□□□□□ -0.55
LMCD1-207ENST00000470776 USHBP1Q8N6Y0 703 aa11.62□□□□□ -0.55
LMCD1-207ENST00000470776 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP11.62□□□□□ -0.55
LMCD1-207ENST00000470776 JCADQ9P266 1359 aa11.62□□□□□ -0.55
LMCD1-207ENST00000470776 PLEKHO1Q53GL0 409 aaPredicted RBP11.61□□□□□ -0.55
LMCD1-207ENST00000470776 CARD10Q9BWT7 1032 aa11.61□□□□□ -0.55
LMCD1-207ENST00000470776 MYH16Q9H6N6 1097 aa11.61□□□□□ -0.55
LMCD1-207ENST00000470776 FAM208AQ9UK61 1670 aaKnown RBP11.6□□□□□ -0.55
Retrieved 100 of 20,778 RNA–protein pairs in 13.4 ms