RNA–Protein interactions for RNA: ENST00000470589.1

GABRR3-201, Transcript of gamma-aminobutyric acid type A receptor rho3 subunit (gene/pseudogene), humanhuman

TSL 1 (best)

Gene GABRR3, Length 4,826 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GABRR3-201ENST00000470589 TAF3Q5VWG9 929 aa4.78□□□□□ -1.64
GABRR3-201ENST00000470589 ZSCAN25Q6NSZ9 544 aa4.78□□□□□ -1.64
GABRR3-201ENST00000470589 PAXIP1Q6ZW49 1069 aaPredicted RBP4.78□□□□□ -1.64
GABRR3-201ENST00000470589 FOXD4L4Q8WXT5 416 aaPredicted RBP4.78□□□□□ -1.64
GABRR3-201ENST00000470589 RUFY1Q96T51 708 aa4.78□□□□□ -1.64
GABRR3-201ENST00000470589 CFAP45Q9UL16 551 aa4.78□□□□□ -1.64
GABRR3-201ENST00000470589 TBC1D2BQ9UPU7 963 aa4.78□□□□□ -1.64
GABRR3-201ENST00000470589 POGZQ7Z3K3 1410 aa4.78□□□□□ -1.64
GABRR3-201ENST00000470589 NFE2L2Q16236 605 aa4.77□□□□□ -1.65
GABRR3-201ENST00000470589 NUTM2DQ5VT03 806 aaPredicted RBP4.77□□□□□ -1.65
GABRR3-201ENST00000470589 RIC3Q7Z5B4 369 aa4.77□□□□□ -1.65
GABRR3-201ENST00000470589 FAM13BQ9NYF5 915 aa4.77□□□□□ -1.65
GABRR3-201ENST00000470589 NOB1Q9ULX3 412 aaKnown RBP4.77□□□□□ -1.65
GABRR3-201ENST00000470589 SHANK2Q9UPX8 1470 aa4.77□□□□□ -1.65
GABRR3-201ENST00000470589 G3V3G9 751 aa4.77□□□□□ -1.65
GABRR3-201ENST00000470589 CDKL5O76039 1030 aa4.77□□□□□ -1.65
GABRR3-201ENST00000470589 CAVIN2O95810 425 aa4.77□□□□□ -1.65
GABRR3-201ENST00000470589 EIF2S2P20042 333 aaKnown RBP4.77□□□□□ -1.65
GABRR3-201ENST00000470589 DCAF8Q5TAQ9 597 aa4.77□□□□□ -1.65
GABRR3-201ENST00000470589 NFXL1Q6ZNB6 911 aa4.77□□□□□ -1.65
GABRR3-201ENST00000470589 SDF4Q9BRK5 362 aa4.77□□□□□ -1.65
GABRR3-201ENST00000470589 FSD1Q9BTV5 496 aa4.77□□□□□ -1.65
GABRR3-201ENST00000470589 DDX24Q9GZR7 859 aaKnown RBP eCLIP4.77□□□□□ -1.65
GABRR3-201ENST00000470589 LUC7LQ9NQ29 371 aaKnown RBP4.77□□□□□ -1.65
GABRR3-201ENST00000470589 NSD3Q9BZ95 1437 aa4.77□□□□□ -1.65
GABRR3-201ENST00000470589 SLC3A2P08195 630 aaKnown RBP4.77□□□□□ -1.65
GABRR3-201ENST00000470589 TXLNAP40222 546 aa4.77□□□□□ -1.65
GABRR3-201ENST00000470589 CABP2Q9NPB3 220 aa4.77□□□□□ -1.65
GABRR3-201ENST00000470589 CTNNA3Q9UI47 895 aa4.77□□□□□ -1.65
GABRR3-201ENST00000470589 SURF6O75683 361 aaKnown RBP4.77□□□□□ -1.65
GABRR3-201ENST00000470589 DCTN1Q14203 1278 aa4.77□□□□□ -1.65
GABRR3-201ENST00000470589 NBPF1Q3BBV0 1214 aa4.77□□□□□ -1.65
GABRR3-201ENST00000470589 DUOX2Q9NRD8 1548 aa4.77□□□□□ -1.65
GABRR3-201ENST00000470589 PES1O00541 588 aaKnown RBP4.76□□□□□ -1.65
GABRR3-201ENST00000470589 RDXP35241 583 aaKnown RBP4.76□□□□□ -1.65
GABRR3-201ENST00000470589 ZSCAN30Q86W11 494 aa4.76□□□□□ -1.65
GABRR3-201ENST00000470589 ZNF592Q92610 1267 aa4.76□□□□□ -1.65
GABRR3-201ENST00000470589 TRIM5Q9C035 493 aa4.76□□□□□ -1.65
GABRR3-201ENST00000470589 SH2B1Q9NRF2 756 aaPredicted RBP4.76□□□□□ -1.65
GABRR3-201ENST00000470589 RAPGEF6Q8TEU7 1601 aa4.76□□□□□ -1.65
GABRR3-201ENST00000470589 ANKRD36BQ8N2N9 1353 aa4.76□□□□□ -1.65
GABRR3-201ENST00000470589 PTPRCP08575 1304 aa4.76□□□□□ -1.65
GABRR3-201ENST00000470589 ESPNB1AK53 854 aa4.76□□□□□ -1.65
GABRR3-201ENST00000470589 APPP05067 770 aa4.76□□□□□ -1.65
GABRR3-201ENST00000470589 IQCEQ6IPM2 695 aa4.76□□□□□ -1.65
GABRR3-201ENST00000470589 WASF1Q92558 559 aa4.76□□□□□ -1.65
GABRR3-201ENST00000470589 MAPKBP1O60336 1514 aa4.76□□□□□ -1.65
GABRR3-201ENST00000470589 NEMFO60524 1076 aa4.76□□□□□ -1.65
GABRR3-201ENST00000470589 PRPF40AO75400 957 aaKnown RBP4.76□□□□□ -1.65
GABRR3-201ENST00000470589 HMOX1P09601 288 aa4.76□□□□□ -1.65
GABRR3-201ENST00000470589 TMPOP42166 694 aaKnown RBP4.76□□□□□ -1.65
GABRR3-201ENST00000470589 EVA1CP58658 441 aa4.76□□□□□ -1.65
GABRR3-201ENST00000470589 CCAR2Q8N163 923 aaKnown RBP4.76□□□□□ -1.65
GABRR3-201ENST00000470589 ARHGAP45Q92619 1136 aa4.76□□□□□ -1.65
GABRR3-201ENST00000470589 R3HCC1Q9Y3T6 440 aaKnown RBP4.76□□□□□ -1.65
GABRR3-201ENST00000470589 UHRF1BP1Q6BDS2 1440 aa4.75□□□□□ -1.65
GABRR3-201ENST00000470589 ASXL1Q8IXJ9 1541 aa4.75□□□□□ -1.65
GABRR3-201ENST00000470589 SMTNL1A8MU46 457 aa4.75□□□□□ -1.65
GABRR3-201ENST00000470589 ERLIN1O75477 346 aa4.75□□□□□ -1.65
GABRR3-201ENST00000470589 EIF3JO75822 258 aaKnown RBP4.75□□□□□ -1.65
GABRR3-201ENST00000470589 THEMISQ8N1K5 641 aaPredicted RBP4.75□□□□□ -1.65
GABRR3-201ENST00000470589 PCMTD1Q96MG8 357 aaPredicted RBP4.75□□□□□ -1.65
GABRR3-201ENST00000470589 PRAM1Q96QH2 718 aa4.75□□□□□ -1.65
GABRR3-201ENST00000470589 RNF216Q9NWF9 866 aaPredicted RBP4.75□□□□□ -1.65
GABRR3-201ENST00000470589 ARHGEF11O15085 1522 aa4.75□□□□□ -1.65
GABRR3-201ENST00000470589 CTAGE5O15320 804 aa4.75□□□□□ -1.65
GABRR3-201ENST00000470589 BCAR3O75815 825 aa4.75□□□□□ -1.65
GABRR3-201ENST00000470589 HMGB1P09429 215 aaKnown RBP4.75□□□□□ -1.65
GABRR3-201ENST00000470589 NLRP6P59044 892 aa4.75□□□□□ -1.65
GABRR3-201ENST00000470589 CCDC27Q2M243 656 aa4.75□□□□□ -1.65
GABRR3-201ENST00000470589 CEP57L1Q8IYX8 460 aa4.75□□□□□ -1.65
GABRR3-201ENST00000470589 AFAP1Q8N556 730 aa4.75□□□□□ -1.65
GABRR3-201ENST00000470589 CDK19Q9BWU1 502 aa4.75□□□□□ -1.65
GABRR3-201ENST00000470589 RARSP54136 660 aaKnown RBP4.75□□□□□ -1.65
GABRR3-201ENST00000470589 CCDC158Q5M9N0 1113 aa4.75□□□□□ -1.65
GABRR3-201ENST00000470589 HDGFL1Q5TGJ6 251 aa4.75□□□□□ -1.65
GABRR3-201ENST00000470589 VPS37DQ86XT2 251 aa4.75□□□□□ -1.65
GABRR3-201ENST00000470589 CREBRFQ8IUR6 639 aa4.75□□□□□ -1.65
GABRR3-201ENST00000470589 TRIM22Q8IYM9 498 aa4.75□□□□□ -1.65
GABRR3-201ENST00000470589 STIM1Q13586 685 aa4.75□□□□□ -1.65
GABRR3-201ENST00000470589 BMP2KLQ5H9B9 411 aa4.75□□□□□ -1.65
GABRR3-201ENST00000470589 CCDC112Q8NEF3 446 aa4.75□□□□□ -1.65
GABRR3-201ENST00000470589 TRIM34Q9BYJ4 488 aa4.75□□□□□ -1.65
GABRR3-201ENST00000470589 NACAP1Q9BZK3 213 aa4.75□□□□□ -1.65
GABRR3-201ENST00000470589 SCAND2PQ9GZW5 306 aaPredicted RBP4.75□□□□□ -1.65
GABRR3-201ENST00000470589 TNMDQ9H2S6 317 aa4.75□□□□□ -1.65
GABRR3-201ENST00000470589 TTC21BQ7Z4L5 1316 aa4.74□□□□□ -1.65
GABRR3-201ENST00000470589 GLRX3O76003 335 aaKnown RBP4.74□□□□□ -1.65
GABRR3-201ENST00000470589 SLC4A2P04920 1241 aa4.74□□□□□ -1.65
GABRR3-201ENST00000470589 STK38Q15208 465 aa4.74□□□□□ -1.65
GABRR3-201ENST00000470589 UVSSAQ2YD98 709 aa4.74□□□□□ -1.65
GABRR3-201ENST00000470589 BLOC1S2Q6QNY1 142 aa4.74□□□□□ -1.65
GABRR3-201ENST00000470589 KCNH5Q8NCM2 988 aa4.74□□□□□ -1.65
GABRR3-201ENST00000470589 KIF1BPQ96EK5 621 aa4.74□□□□□ -1.65
GABRR3-201ENST00000470589 GNL3LQ9NVN8 582 aaKnown RBP4.74□□□□□ -1.65
GABRR3-201ENST00000470589 ZNHIT6Q9NWK9 470 aaKnown RBP4.74□□□□□ -1.65
GABRR3-201ENST00000470589 SPG7Q9UQ90 795 aa4.74□□□□□ -1.65
GABRR3-201ENST00000470589 ATF3P18847 181 aa4.74□□□□□ -1.65
GABRR3-201ENST00000470589 CALRP27797 417 aaKnown RBP4.74□□□□□ -1.65
GABRR3-201ENST00000470589 HDAC1Q13547 482 aaPredicted RBP4.74□□□□□ -1.65
Retrieved 100 of 20,778 RNA–protein pairs in 12.2 ms