RNA–Protein interactions for RNA: ENST00000470498.1

RNF220-207, Transcript of ring finger protein 220, humanhuman

TSL 3

Gene RNF220, Length 594 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNF220-207ENST00000470498 ZBTB3Q9H5J0 574 aa7.74□□□□□ -1.17
RNF220-207ENST00000470498 SALL2Q9Y467 1007 aaPredicted RBP7.74□□□□□ -1.17
RNF220-207ENST00000470498 YEATS2Q9ULM3 1422 aa7.74□□□□□ -1.17
RNF220-207ENST00000470498 ARHGAP35Q9NRY4 1499 aa7.74□□□□□ -1.17
RNF220-207ENST00000470498 FMNL1O95466 1100 aaPredicted RBP7.73□□□□□ -1.17
RNF220-207ENST00000470498 HRCP23327 699 aa7.73□□□□□ -1.17
RNF220-207ENST00000470498 RNF19BQ6ZMZ0 732 aa7.73□□□□□ -1.17
RNF220-207ENST00000470498 CABLES1Q8TDN4 633 aa7.73□□□□□ -1.17
RNF220-207ENST00000470498 SYMPKQ92797 1274 aaKnown RBP7.73□□□□□ -1.17
RNF220-207ENST00000470498 THAP11Q96EK4 314 aa7.73□□□□□ -1.17
RNF220-207ENST00000470498 EIF4ENIF1Q9NRA8 985 aaKnown RBP7.73□□□□□ -1.17
RNF220-207ENST00000470498 SETD1BQ9UPS6 1966 aaKnown RBP7.73□□□□□ -1.17
RNF220-207ENST00000470498 CDK13Q14004 1512 aaKnown RBP7.73□□□□□ -1.17
RNF220-207ENST00000470498 ZMYM4Q5VZL5 1548 aa7.73□□□□□ -1.17
RNF220-207ENST00000470498 CFAP74Q9C0B2 1584 aa7.72□□□□□ -1.17
RNF220-207ENST00000470498 TROQ12816 1431 aaPredicted RBP7.72□□□□□ -1.17
RNF220-207ENST00000470498 SPDYE5A6NIY4 337 aa7.72□□□□□ -1.17
RNF220-207ENST00000470498 NUTM2BA6NNL0 878 aaPredicted RBP7.72□□□□□ -1.17
RNF220-207ENST00000470498 NUTM2EB1AL46 878 aaPredicted RBP7.72□□□□□ -1.17
RNF220-207ENST00000470498 TLL1O43897 1013 aa7.72□□□□□ -1.17
RNF220-207ENST00000470498 CEBPAP49715 358 aaPredicted RBP7.72□□□□□ -1.17
RNF220-207ENST00000470498 LCE2AQ5TA79 106 aaPredicted RBP7.72□□□□□ -1.17
RNF220-207ENST00000470498 NUTM2DQ5VT03 806 aaPredicted RBP7.72□□□□□ -1.17
RNF220-207ENST00000470498 PPP2R2DQ66LE6 453 aa7.72□□□□□ -1.17
RNF220-207ENST00000470498 BRICD5Q6PL45 260 aa7.72□□□□□ -1.17
RNF220-207ENST00000470498 NUTM2AQ8IVF1 878 aaPredicted RBP7.72□□□□□ -1.17
RNF220-207ENST00000470498 ZNF516Q92618 1163 aa7.72□□□□□ -1.17
RNF220-207ENST00000470498 LMTK3Q96Q04 1460 aa7.72□□□□□ -1.17
RNF220-207ENST00000470498 HECW1Q76N89 1606 aa7.71□□□□□ -1.17
RNF220-207ENST00000470498 MADDQ8WXG6 1647 aa7.71□□□□□ -1.17
RNF220-207ENST00000470498 FBXO31Q5XUX0 539 aaPredicted RBP7.71□□□□□ -1.18
RNF220-207ENST00000470498 RETREG3Q86VR2 466 aa7.71□□□□□ -1.18
RNF220-207ENST00000470498 SPSB2Q99619 263 aa7.71□□□□□ -1.18
RNF220-207ENST00000470498 TTC37Q6PGP7 1564 aa7.71□□□□□ -1.18
RNF220-207ENST00000470498 ZFYVE16Q7Z3T8 1539 aa7.7□□□□□ -1.18
RNF220-207ENST00000470498 ADH1BP00325 375 aa7.7□□□□□ -1.18
RNF220-207ENST00000470498 RTL5Q5HYW3 569 aaPredicted RBP7.7□□□□□ -1.18
RNF220-207ENST00000470498 TRIM67Q6ZTA4 783 aa7.7□□□□□ -1.18
RNF220-207ENST00000470498 USB1Q9BQ65 265 aaKnown RBP7.7□□□□□ -1.18
RNF220-207ENST00000470498 PCF11O94913 1555 aaKnown RBP7.7□□□□□ -1.18
RNF220-207ENST00000470498 ARHGEF40Q8TER5 1519 aa7.69□□□□□ -1.18
RNF220-207ENST00000470498 RFC5P40937 340 aa7.69□□□□□ -1.18
RNF220-207ENST00000470498 PRR7Q8TB68 274 aa7.69□□□□□ -1.18
RNF220-207ENST00000470498 CLIP1P30622 1438 aa7.69□□□□□ -1.18
RNF220-207ENST00000470498 RIMS1Q86UR5 1692 aaKnown RBP7.68□□□□□ -1.18
RNF220-207ENST00000470498 CFAP99D6REC4 459 aa7.68□□□□□ -1.18
RNF220-207ENST00000470498 MYT1Q01538 1121 aa7.68□□□□□ -1.18
RNF220-207ENST00000470498 MSS51Q4VC12 460 aa7.68□□□□□ -1.18
RNF220-207ENST00000470498 TREML4Q6UXN2 200 aa7.68□□□□□ -1.18
RNF220-207ENST00000470498 C9orf84Q5VXU9 1444 aa7.68□□□□□ -1.18
RNF220-207ENST00000470498 CASKIN1Q8WXD9 1431 aa7.68□□□□□ -1.18
RNF220-207ENST00000470498 ZNF518AQ6AHZ1 1483 aa7.68□□□□□ -1.18
RNF220-207ENST00000470498 MLH3Q9UHC1 1453 aa7.68□□□□□ -1.18
RNF220-207ENST00000470498 SIGLEC1Q9BZZ2 1709 aa7.67□□□□□ -1.18
RNF220-207ENST00000470498 FAM160A2Q8N612 972 aaPredicted RBP7.67□□□□□ -1.18
RNF220-207ENST00000470498 NKX2-3Q8TAU0 364 aa7.67□□□□□ -1.18
RNF220-207ENST00000470498 ESF1Q9H501 851 aaKnown RBP7.67□□□□□ -1.18
RNF220-207ENST00000470498 ARHGEF12Q9NZN5 1544 aa7.67□□□□□ -1.18
RNF220-207ENST00000470498 HNRNPMP52272 730 aaKnown RBP eCLIP7.66□□□□□ -1.18
RNF220-207ENST00000470498 HELBQ8NG08 1087 aaPredicted RBP7.66□□□□□ -1.18
RNF220-207ENST00000470498 TSC1Q92574 1164 aa7.66□□□□□ -1.18
RNF220-207ENST00000470498 TRAPPC8Q9Y2L5 1435 aa7.66□□□□□ -1.18
RNF220-207ENST00000470498 MYO5CQ9NQX4 1742 aa7.66□□□□□ -1.18
RNF220-207ENST00000470498 ARHGAP5Q13017 1502 aa7.65□□□□□ -1.18
RNF220-207ENST00000470498 TMEM259Q4ZIN3 620 aa7.65□□□□□ -1.18
RNF220-207ENST00000470498 DESI1Q6ICB0 168 aa7.65□□□□□ -1.18
RNF220-207ENST00000470498 SLC6A16Q9GZN6 736 aa7.65□□□□□ -1.18
RNF220-207ENST00000470498 PRDM9Q9NQV7 894 aa7.65□□□□□ -1.18
RNF220-207ENST00000470498 ZNF777Q9ULD5 760 aaPredicted RBP7.65□□□□□ -1.18
RNF220-207ENST00000470498 GTF3C3Q9Y5Q9 886 aa7.65□□□□□ -1.18
RNF220-207ENST00000470498 CDC42BPBQ9Y5S2 1711 aa7.64□□□□□ -1.19
RNF220-207ENST00000470498 KIF14Q15058 1648 aa7.64□□□□□ -1.19
RNF220-207ENST00000470498 KDM5CP41229 1560 aa7.64□□□□□ -1.19
RNF220-207ENST00000470498 AGLP35573 1532 aa7.64□□□□□ -1.19
RNF220-207ENST00000470498 AP1G2O75843 785 aa7.64□□□□□ -1.19
RNF220-207ENST00000470498 JUNDP17535 347 aa7.64□□□□□ -1.19
RNF220-207ENST00000470498 CFDP1Q9UEE9 299 aaPredicted RBP7.64□□□□□ -1.19
RNF220-207ENST00000470498 CCDC18Q5T9S5 1454 aa7.63□□□□□ -1.19
RNF220-207ENST00000470498 SPAG9O60271 1321 aaKnown RBP7.63□□□□□ -1.19
RNF220-207ENST00000470498 S1PR4O95977 384 aa7.63□□□□□ -1.19
RNF220-207ENST00000470498 MMP16P51512 607 aa7.63□□□□□ -1.19
RNF220-207ENST00000470498 REREQ9P2R6 1566 aa7.63□□□□□ -1.19
RNF220-207ENST00000470498 GPATCH8Q9UKJ3 1502 aaKnown RBP7.62□□□□□ -1.19
RNF220-207ENST00000470498 KIAA1107Q9UPP5 1409 aa7.62□□□□□ -1.19
RNF220-207ENST00000470498 ZMYM3Q14202 1370 aa7.62□□□□□ -1.19
RNF220-207ENST00000470498 FER1L4A9Z1Z3 1794 aa7.62□□□□□ -1.19
RNF220-207ENST00000470498 LRRIQ1Q96JM4 1722 aa7.62□□□□□ -1.19
RNF220-207ENST00000470498 DXOO77932 396 aaKnown RBP7.62□□□□□ -1.19
RNF220-207ENST00000470498 PKDCCQ504Y2 493 aa7.62□□□□□ -1.19
RNF220-207ENST00000470498 BANK1Q8NDB2 785 aa7.62□□□□□ -1.19
RNF220-207ENST00000470498 EMID1Q96A84 441 aaPredicted RBP7.62□□□□□ -1.19
RNF220-207ENST00000470498 PTPRTO14522 1441 aa7.61□□□□□ -1.19
RNF220-207ENST00000470498 DGAT1O75907 488 aa7.61□□□□□ -1.19
RNF220-207ENST00000470498 USP17L8P0C7I0 530 aa7.61□□□□□ -1.19
RNF220-207ENST00000470498 CTDSPL2Q05D32 466 aa7.61□□□□□ -1.19
RNF220-207ENST00000470498 UHRF1BP1Q6BDS2 1440 aa7.61□□□□□ -1.19
RNF220-207ENST00000470498 CNTLNQ9NXG0 1405 aa7.61□□□□□ -1.19
RNF220-207ENST00000470498 DIP2CQ9Y2E4 1556 aa7.6□□□□□ -1.19
RNF220-207ENST00000470498 LOC100996750A0A140TA64 210 aa7.6□□□□□ -1.19
RNF220-207ENST00000470498 GGCXP38435 758 aa7.6□□□□□ -1.19
Retrieved 100 of 20,778 RNA–protein pairs in 19.7 ms