RNA–Protein interactions for RNA: ENST00000470160.1

KDM3A-210, Transcript of lysine demethylase 3A, humanhuman

TSL 2

Gene KDM3A, Length 2,955 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
KDM3A-210ENST00000470160 U2AF1Q01081 240 aaKnown RBP eCLIP9.22□□□□□ -0.93
KDM3A-210ENST00000470160 TRIM35Q9UPQ4 493 aa9.22□□□□□ -0.93
KDM3A-210ENST00000470160 EMILIN1Q9Y6C2 1016 aa9.22□□□□□ -0.93
KDM3A-210ENST00000470160 NGDNQ8NEJ9 315 aaKnown RBP9.21□□□□□ -0.94
KDM3A-210ENST00000470160 FAM208AQ9UK61 1670 aaKnown RBP9.21□□□□□ -0.94
KDM3A-210ENST00000470160 SPINK5Q9NQ38 1064 aaPredicted RBP9.21□□□□□ -0.94
KDM3A-210ENST00000470160 COL18A1P39060 1754 aa9.2□□□□□ -0.94
KDM3A-210ENST00000470160 IGSF1Q8N6C5 1336 aa9.2□□□□□ -0.94
KDM3A-210ENST00000470160 TMEM94Q12767 1356 aa9.2□□□□□ -0.94
KDM3A-210ENST00000470160 PXDNQ92626 1479 aa9.19□□□□□ -0.94
KDM3A-210ENST00000470160 NHSL1Q5SYE7 1610 aa9.19□□□□□ -0.94
KDM3A-210ENST00000470160 EIF4A2Q14240 407 aaKnown RBP9.19□□□□□ -0.94
KDM3A-210ENST00000470160 NFE2L2Q16236 605 aa9.19□□□□□ -0.94
KDM3A-210ENST00000470160 MAP3K19Q56UN5 1328 aa9.19□□□□□ -0.94
KDM3A-210ENST00000470160 BRPF1P55201 1214 aaPredicted RBP9.19□□□□□ -0.94
KDM3A-210ENST00000470160 PROSER2Q86WR7 435 aaPredicted RBP9.19□□□□□ -0.94
KDM3A-210ENST00000470160 PMFBP1Q8TBY8 1022 aa9.19□□□□□ -0.94
KDM3A-210ENST00000470160 MYH16Q9H6N6 1097 aa9.19□□□□□ -0.94
KDM3A-210ENST00000470160 DMRT2Q9Y5R5 561 aa9.19□□□□□ -0.94
KDM3A-210ENST00000470160 ADAMTS7Q9UKP4 1686 aa9.19□□□□□ -0.94
KDM3A-210ENST00000470160 UBE2Q2Q8WVN8 375 aa9.18□□□□□ -0.94
KDM3A-210ENST00000470160 ZNF428Q96B54 188 aa9.18□□□□□ -0.94
KDM3A-210ENST00000470160 ZNF853P0CG23 659 aa9.18□□□□□ -0.94
KDM3A-210ENST00000470160 KCNH5Q8NCM2 988 aa9.18□□□□□ -0.94
KDM3A-210ENST00000470160 MAPK8IP3Q9UPT6 1336 aa9.18□□□□□ -0.94
KDM3A-210ENST00000470160 CALD1Q05682 793 aaKnown RBP9.18□□□□□ -0.94
KDM3A-210ENST00000470160 AAMPQ13685 434 aa9.18□□□□□ -0.94
KDM3A-210ENST00000470160 ANO8Q9HCE9 1232 aaPredicted RBP9.18□□□□□ -0.94
KDM3A-210ENST00000470160 LMOD3Q0VAK6 560 aa9.17□□□□□ -0.94
KDM3A-210ENST00000470160 CADPS2Q86UW7 1296 aa9.17□□□□□ -0.94
KDM3A-210ENST00000470160 GOLGA6L2Q8N9W4 650 aaPredicted RBP9.17□□□□□ -0.94
KDM3A-210ENST00000470160 U2SURPO15042 1029 aaKnown RBP9.16□□□□□ -0.94
KDM3A-210ENST00000470160 PRKAR2BP31323 418 aa9.16□□□□□ -0.94
KDM3A-210ENST00000470160 PDE3AQ14432 1141 aa9.16□□□□□ -0.94
KDM3A-210ENST00000470160 RRS1Q15050 365 aaKnown RBP9.16□□□□□ -0.94
KDM3A-210ENST00000470160 ABCA3Q99758 1704 aa9.16□□□□□ -0.94
KDM3A-210ENST00000470160 HTATSF1O43719 755 aaKnown RBP9.16□□□□□ -0.94
KDM3A-210ENST00000470160 FBLN1P23142 703 aa9.15□□□□□ -0.94
KDM3A-210ENST00000470160 HOXC9P31274 260 aa9.15□□□□□ -0.94
KDM3A-210ENST00000470160 IP6K1Q92551 441 aa9.15□□□□□ -0.94
KDM3A-210ENST00000470160 MSH6P52701 1360 aa9.15□□□□□ -0.94
KDM3A-210ENST00000470160 NLRP6P59044 892 aa9.15□□□□□ -0.94
KDM3A-210ENST00000470160 IFT57Q9NWB7 429 aa9.15□□□□□ -0.94
KDM3A-210ENST00000470160 SALL2Q9Y467 1007 aaPredicted RBP9.15□□□□□ -0.94
KDM3A-210ENST00000470160 RIPK4P57078 832 aa9.15□□□□□ -0.95
KDM3A-210ENST00000470160 OVOS2A0A0G2JMS6 1433 aa9.15□□□□□ -0.95
KDM3A-210ENST00000470160 FANCIQ9NVI1 1328 aa9.14□□□□□ -0.95
KDM3A-210ENST00000470160 TNS3Q68CZ2 1445 aa9.14□□□□□ -0.95
KDM3A-210ENST00000470160 NUTM2FA1L443 756 aa9.14□□□□□ -0.95
KDM3A-210ENST00000470160 HSP90AB2PQ58FF8 381 aa9.14□□□□□ -0.95
KDM3A-210ENST00000470160 ESCO1Q5FWF5 840 aa9.14□□□□□ -0.95
KDM3A-210ENST00000470160 ABTB2Q8N961 1025 aa9.14□□□□□ -0.95
KDM3A-210ENST00000470160 PHACTR3Q96KR7 559 aa9.14□□□□□ -0.95
KDM3A-210ENST00000470160 NEFMP07197 916 aa9.14□□□□□ -0.95
KDM3A-210ENST00000470160 RARSP54136 660 aaKnown RBP9.14□□□□□ -0.95
KDM3A-210ENST00000470160 PSME1Q06323 249 aa9.14□□□□□ -0.95
KDM3A-210ENST00000470160 RGPD2P0DJD1 1756 aa9.14□□□□□ -0.95
KDM3A-210ENST00000470160 VIRMAQ69YN4 1812 aaKnown RBP9.14□□□□□ -0.95
KDM3A-210ENST00000470160 CACNA1FO60840 1977 aa9.13□□□□□ -0.95
KDM3A-210ENST00000470160 ALDH1L2Q3SY69 923 aa9.13□□□□□ -0.95
KDM3A-210ENST00000470160 ARHGEF25Q86VW2 580 aa9.13□□□□□ -0.95
KDM3A-210ENST00000470160 ORAI2Q96SN7 254 aa9.13□□□□□ -0.95
KDM3A-210ENST00000470160 BABAM1Q9NWV8 329 aa9.13□□□□□ -0.95
KDM3A-210ENST00000470160 CPDO75976 1380 aa9.13□□□□□ -0.95
KDM3A-210ENST00000470160 CRB1P82279 1406 aa9.13□□□□□ -0.95
KDM3A-210ENST00000470160 SIPA1L3O60292 1781 aaPredicted RBP9.13□□□□□ -0.95
KDM3A-210ENST00000470160 RGPD5Q99666 1765 aa9.12□□□□□ -0.95
KDM3A-210ENST00000470160 KIAA0232Q92628 1395 aa9.12□□□□□ -0.95
KDM3A-210ENST00000470160 ATF3P18847 181 aa9.12□□□□□ -0.95
KDM3A-210ENST00000470160 LTBP4Q8N2S1 1624 aa9.12□□□□□ -0.95
KDM3A-210ENST00000470160 COL22A1Q8NFW1 1626 aaPredicted RBP9.12□□□□□ -0.95
KDM3A-210ENST00000470160 NPHP3Q7Z494 1330 aa9.12□□□□□ -0.95
KDM3A-210ENST00000470160 N4BP2Q86UW6 1770 aaPredicted RBP9.12□□□□□ -0.95
KDM3A-210ENST00000470160 GNAI1P63096 354 aa9.12□□□□□ -0.95
KDM3A-210ENST00000470160 KRT28Q7Z3Y7 464 aa9.12□□□□□ -0.95
KDM3A-210ENST00000470160 CFAP44Q96MT7 982 aa9.12□□□□□ -0.95
KDM3A-210ENST00000470160 RRP7AQ9Y3A4 280 aaKnown RBP9.12□□□□□ -0.95
KDM3A-210ENST00000470160 KDM3BQ7LBC6 1761 aa9.12□□□□□ -0.95
KDM3A-210ENST00000470160 PKNOX2Q96KN3 472 aa9.12□□□□□ -0.95
KDM3A-210ENST00000470160 EYA1Q99502 592 aa9.12□□□□□ -0.95
KDM3A-210ENST00000470160 SOS1Q07889 1333 aaPredicted RBP9.11□□□□□ -0.95
KDM3A-210ENST00000470160 SOS2Q07890 1332 aaPredicted RBP9.11□□□□□ -0.95
KDM3A-210ENST00000470160 PKD1L3Q7Z443 1732 aa9.11□□□□□ -0.95
KDM3A-210ENST00000470160 AHDC1Q5TGY3 1603 aaPredicted RBP9.11□□□□□ -0.95
KDM3A-210ENST00000470160 PDIA4P13667 645 aaKnown RBP9.11□□□□□ -0.95
KDM3A-210ENST00000470160 HSPA2P54652 639 aa9.11□□□□□ -0.95
KDM3A-210ENST00000470160 AMPHP49418 695 aa9.1□□□□□ -0.95
KDM3A-210ENST00000470160 SULT6B1Q6IMI4 303 aa9.1□□□□□ -0.95
KDM3A-210ENST00000470160 SPATA31A3Q5VYP0 1347 aa9.1□□□□□ -0.95
KDM3A-210ENST00000470160 PARP4Q9UKK3 1724 aaKnown RBP9.1□□□□□ -0.95
KDM3A-210ENST00000470160 PPM1GO15355 546 aaPredicted RBP9.1□□□□□ -0.95
KDM3A-210ENST00000470160 GCP02774 474 aa9.1□□□□□ -0.95
KDM3A-210ENST00000470160 MS4A1P11836 297 aa9.1□□□□□ -0.95
KDM3A-210ENST00000470160 HOMEZQ8IX15 550 aa9.1□□□□□ -0.95
KDM3A-210ENST00000470160 GAS2L2Q8NHY3 880 aa9.1□□□□□ -0.95
KDM3A-210ENST00000470160 CHL1O00533 1208 aa9.09□□□□□ -0.95
KDM3A-210ENST00000470160 HMOX1P09601 288 aa9.09□□□□□ -0.95
KDM3A-210ENST00000470160 EXOC6Q8TAG9 804 aa9.09□□□□□ -0.95
KDM3A-210ENST00000470160 ARHGAP45Q92619 1136 aa9.09□□□□□ -0.95
KDM3A-210ENST00000470160 SENP3-EIF4A1A0A087X0R7 540 aa9.09□□□□□ -0.95
Retrieved 100 of 20,778 RNA–protein pairs in 63 ms