RNA–Protein interactions for RNA: ENST00000470094.1

BRCA2-202, Transcript of BRCA2, DNA repair associated, humanhuman

TSL 5

Gene BRCA2, Length 842 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRCA2-202ENST00000470094 CLUAP1Q96AJ1 413 aa8.26□□□□□ -1.09
BRCA2-202ENST00000470094 KCTD15Q96SI1 283 aaPredicted RBP8.26□□□□□ -1.09
BRCA2-202ENST00000470094 AVPP01185 164 aa8.25□□□□□ -1.09
BRCA2-202ENST00000470094 GRM5P41594 1212 aa8.25□□□□□ -1.09
BRCA2-202ENST00000470094 HPS1Q92902 700 aa8.25□□□□□ -1.09
BRCA2-202ENST00000470094 PROSER2Q86WR7 435 aaPredicted RBP8.24□□□□□ -1.09
BRCA2-202ENST00000470094 CTC1Q2NKJ3 1217 aa8.23□□□□□ -1.09
BRCA2-202ENST00000470094 CCDC116Q8IYX3 515 aa8.23□□□□□ -1.09
BRCA2-202ENST00000470094 A6NJR5 290 aa8.22□□□□□ -1.09
BRCA2-202ENST00000470094 NR3C2P08235 984 aa8.22□□□□□ -1.09
BRCA2-202ENST00000470094 SOX11P35716 441 aa8.22□□□□□ -1.09
BRCA2-202ENST00000470094 RAB15P59190 212 aa8.22□□□□□ -1.09
BRCA2-202ENST00000470094 MYT1Q01538 1121 aa8.22□□□□□ -1.09
BRCA2-202ENST00000470094 INTS6LQ5JSJ4 861 aaKnown RBP8.22□□□□□ -1.09
BRCA2-202ENST00000470094 WDR4P57081 412 aaKnown RBP8.21□□□□□ -1.1
BRCA2-202ENST00000470094 DHX9Q08211 1270 aaKnown RBP8.21□□□□□ -1.1
BRCA2-202ENST00000470094 SEMA3FQ13275 785 aa8.21□□□□□ -1.1
BRCA2-202ENST00000470094 TRAF7Q6Q0C0 670 aa8.21□□□□□ -1.1
BRCA2-202ENST00000470094 SEPT12Q8IYM1 358 aa8.21□□□□□ -1.1
BRCA2-202ENST00000470094 ESPNB1AK53 854 aa8.2□□□□□ -1.1
BRCA2-202ENST00000470094 AXIN1O15169 862 aa8.2□□□□□ -1.1
BRCA2-202ENST00000470094 GIGYF1O75420 1035 aaPredicted RBP8.2□□□□□ -1.1
BRCA2-202ENST00000470094 RNF20Q5VTR2 975 aa8.2□□□□□ -1.1
BRCA2-202ENST00000470094 CRIPAKQ8N1N5 446 aa8.2□□□□□ -1.1
BRCA2-202ENST00000470094 EMILIN1Q9Y6C2 1016 aa8.2□□□□□ -1.1
BRCA2-202ENST00000470094 ST8SIA5O15466 376 aa8.19□□□□□ -1.1
BRCA2-202ENST00000470094 CAPN5O15484 640 aaPredicted RBP8.19□□□□□ -1.1
BRCA2-202ENST00000470094 SMCPP49901 116 aaPredicted RBP8.19□□□□□ -1.1
BRCA2-202ENST00000470094 PPP1R26Q5T8A7 1209 aaPredicted RBP8.19□□□□□ -1.1
BRCA2-202ENST00000470094 PGPEP1Q9NXJ5 209 aa8.19□□□□□ -1.1
BRCA2-202ENST00000470094 ZIC2O95409 532 aaPredicted RBP8.18□□□□□ -1.1
BRCA2-202ENST00000470094 TIMP2P16035 220 aa8.18□□□□□ -1.1
BRCA2-202ENST00000470094 CCDC125Q86Z20 511 aa8.18□□□□□ -1.1
BRCA2-202ENST00000470094 FNBP4Q8N3X1 1017 aaPredicted RBP8.18□□□□□ -1.1
BRCA2-202ENST00000470094 ITPKCQ96DU7 683 aa8.18□□□□□ -1.1
BRCA2-202ENST00000470094 AAASQ9NRG9 546 aa8.18□□□□□ -1.1
BRCA2-202ENST00000470094 CEP126Q9P2H0 1117 aa8.18□□□□□ -1.1
BRCA2-202ENST00000470094 SLFNL1Q499Z3 407 aa8.17□□□□□ -1.1
BRCA2-202ENST00000470094 TRIM52Q96A61 297 aa8.17□□□□□ -1.1
BRCA2-202ENST00000470094 KLF16Q9BXK1 252 aaPredicted RBP8.17□□□□□ -1.1
BRCA2-202ENST00000470094 POM121CA8CG34 1229 aa8.16□□□□□ -1.1
BRCA2-202ENST00000470094 ERVH48-1M5A8F1 160 aa8.16□□□□□ -1.1
BRCA2-202ENST00000470094 ZFAND3Q9H8U3 227 aa8.16□□□□□ -1.1
BRCA2-202ENST00000470094 LCE2BO14633 110 aa8.15□□□□□ -1.1
BRCA2-202ENST00000470094 C14orf37Q86TY3 774 aa8.15□□□□□ -1.1
BRCA2-202ENST00000470094 ZMYND15Q9H091 742 aa8.15□□□□□ -1.1
BRCA2-202ENST00000470094 ALG2Q9H553 416 aa8.15□□□□□ -1.1
BRCA2-202ENST00000470094 TRAK2O60296 914 aa8.14□□□□□ -1.11
BRCA2-202ENST00000470094 RNF135Q8IUD6 432 aa8.14□□□□□ -1.11
BRCA2-202ENST00000470094 ZNF784Q8NCA9 323 aaPredicted RBP8.14□□□□□ -1.11
BRCA2-202ENST00000470094 TMPRSS4Q9NRS4 437 aa8.14□□□□□ -1.11
BRCA2-202ENST00000470094 PCDHB11Q9Y5F2 797 aa8.14□□□□□ -1.11
BRCA2-202ENST00000470094 HDGFL1Q5TGJ6 251 aa8.12□□□□□ -1.11
BRCA2-202ENST00000470094 MEIOBQ8N635 442 aa8.12□□□□□ -1.11
BRCA2-202ENST00000470094 GLMNQ92990 594 aa8.12□□□□□ -1.11
BRCA2-202ENST00000470094 CYLDQ9NQC7 956 aa8.12□□□□□ -1.11
BRCA2-202ENST00000470094 UPP2O95045 317 aa8.11□□□□□ -1.11
BRCA2-202ENST00000470094 BMP1P13497 986 aa8.11□□□□□ -1.11
BRCA2-202ENST00000470094 CBLBQ13191 982 aa8.11□□□□□ -1.11
BRCA2-202ENST00000470094 ERICH6Q7L0X2 663 aa8.11□□□□□ -1.11
BRCA2-202ENST00000470094 PHTF2Q8N3S3 785 aa8.11□□□□□ -1.11
BRCA2-202ENST00000470094 ADAMTS19Q8TE59 1207 aa8.11□□□□□ -1.11
BRCA2-202ENST00000470094 CCDC85AQ96PX6 553 aaPredicted RBP8.11□□□□□ -1.11
BRCA2-202ENST00000470094 ESF1Q9H501 851 aaKnown RBP8.11□□□□□ -1.11
BRCA2-202ENST00000470094 ATP13A2Q9NQ11 1180 aa8.11□□□□□ -1.11
BRCA2-202ENST00000470094 DACH1Q9UI36 760 aa8.11□□□□□ -1.11
BRCA2-202ENST00000470094 DOLKQ9UPQ8 538 aa8.11□□□□□ -1.11
BRCA2-202ENST00000470094 SCARF1Q14162 830 aa8.1□□□□□ -1.11
BRCA2-202ENST00000470094 CC2D2BQ6DHV5 1058 aa8.1□□□□□ -1.11
BRCA2-202ENST00000470094 MRPL14Q6P1L8 145 aaKnown RBP8.1□□□□□ -1.11
BRCA2-202ENST00000470094 CALR3Q96L12 384 aaKnown RBP8.1□□□□□ -1.11
BRCA2-202ENST00000470094 LILRA1O75019 489 aa8.09□□□□□ -1.11
BRCA2-202ENST00000470094 MYCP01106 439 aaPredicted RBP8.09□□□□□ -1.11
BRCA2-202ENST00000470094 ERVK-9P63128 1117 aa8.09□□□□□ -1.11
BRCA2-202ENST00000470094 Q6ZVU0 165 aa8.09□□□□□ -1.11
BRCA2-202ENST00000470094 TSEN34Q9BSV6 310 aaKnown RBP8.09□□□□□ -1.11
BRCA2-202ENST00000470094 ZNF777Q9ULD5 760 aaPredicted RBP8.09□□□□□ -1.11
BRCA2-202ENST00000470094 PIK3CDO00329 1044 aa8.08□□□□□ -1.12
BRCA2-202ENST00000470094 ADH1AP07327 375 aa8.08□□□□□ -1.12
BRCA2-202ENST00000470094 MAP7D1Q3KQU3 841 aa8.08□□□□□ -1.12
BRCA2-202ENST00000470094 TRIM46Q7Z4K8 759 aa8.08□□□□□ -1.12
BRCA2-202ENST00000470094 LINC00528Q8N1L1 170 aa8.08□□□□□ -1.12
BRCA2-202ENST00000470094 PLPP7Q8NBV4 271 aa8.08□□□□□ -1.12
BRCA2-202ENST00000470094 NFATC2IPQ8NCF5 419 aa8.08□□□□□ -1.12
BRCA2-202ENST00000470094 CHIC2Q9UKJ5 165 aa8.08□□□□□ -1.12
BRCA2-202ENST00000470094 BMP2P12643 396 aa8.07□□□□□ -1.12
BRCA2-202ENST00000470094 SKIP12755 728 aa8.07□□□□□ -1.12
BRCA2-202ENST00000470094 ADD1P35611 737 aaKnown RBP8.07□□□□□ -1.12
BRCA2-202ENST00000470094 SCTRP47872 440 aa8.07□□□□□ -1.12
BRCA2-202ENST00000470094 OXLD1Q5BKU9 147 aa8.07□□□□□ -1.12
BRCA2-202ENST00000470094 CDCA7Q9BWT1 371 aaPredicted RBP8.07□□□□□ -1.12
BRCA2-202ENST00000470094 SENP2Q9HC62 589 aa8.07□□□□□ -1.12
BRCA2-202ENST00000470094 RELBQ01201 579 aa8.06□□□□□ -1.12
BRCA2-202ENST00000470094 USP4Q13107 963 aa8.06□□□□□ -1.12
BRCA2-202ENST00000470094 TSGA10IPQ3SY00 556 aa8.06□□□□□ -1.12
BRCA2-202ENST00000470094 C6orf118Q5T5N4 469 aa8.06□□□□□ -1.12
BRCA2-202ENST00000470094 CYP2U1Q7Z449 544 aa8.06□□□□□ -1.12
BRCA2-202ENST00000470094 KIFC2Q96AC6 838 aa8.06□□□□□ -1.12
BRCA2-202ENST00000470094 SIRT1Q96EB6 747 aa8.06□□□□□ -1.12
BRCA2-202ENST00000470094 AGBL1Q96MI9 1066 aa8.06□□□□□ -1.12
Retrieved 100 of 20,778 RNA–protein pairs in 49.1 ms