RNA–Protein interactions for RNA: ENST00000469625.2

CHD1L-206, Transcript of chromodomain helicase DNA binding protein 1 like, humanhuman

TSL 5

Gene CHD1L, Length 423 nt, Biotype processed transcript, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD1L-206ENST00000469625 CABP1Q9NZU7 370 aa8.45□□□□□ -1.06
CHD1L-206ENST00000469625 PLCH1Q4KWH8 1693 aa8.45□□□□□ -1.06
CHD1L-206ENST00000469625 TNKS1BP1Q9C0C2 1729 aaKnown RBP8.45□□□□□ -1.06
CHD1L-206ENST00000469625 USP6P35125 1406 aa8.45□□□□□ -1.06
CHD1L-206ENST00000469625 BCL9LQ86UU0 1499 aa8.45□□□□□ -1.06
CHD1L-206ENST00000469625 CRYBG1Q9Y4K1 1723 aa8.44□□□□□ -1.06
CHD1L-206ENST00000469625 RNF25Q96BH1 459 aaPredicted RBP8.44□□□□□ -1.06
CHD1L-206ENST00000469625 FARP1Q9Y4F1 1045 aaPredicted RBP8.44□□□□□ -1.06
CHD1L-206ENST00000469625 RGS12O14924 1447 aa8.44□□□□□ -1.06
CHD1L-206ENST00000469625 PHRF1Q9P1Y6 1649 aaKnown RBP8.43□□□□□ -1.06
CHD1L-206ENST00000469625 NUTM2GQ5VZR2 741 aa8.43□□□□□ -1.06
CHD1L-206ENST00000469625 UNC5CLQ8IV45 518 aa8.43□□□□□ -1.06
CHD1L-206ENST00000469625 ABTB2Q8N961 1025 aa8.43□□□□□ -1.06
CHD1L-206ENST00000469625 USP47Q96K76 1375 aa8.43□□□□□ -1.06
CHD1L-206ENST00000469625 NRKQ7Z2Y5 1582 aa8.43□□□□□ -1.06
CHD1L-206ENST00000469625 NWD2Q9ULI1 1742 aa8.43□□□□□ -1.06
CHD1L-206ENST00000469625 COL14A1Q05707 1796 aaKnown RBP8.43□□□□□ -1.06
CHD1L-206ENST00000469625 ST20-MTHFSA0A0A6YYL1 179 aa8.42□□□□□ -1.06
CHD1L-206ENST00000469625 NLRP13Q86W25 1043 aa8.42□□□□□ -1.06
CHD1L-206ENST00000469625 PRDM11Q9NQV5 511 aa8.42□□□□□ -1.06
CHD1L-206ENST00000469625 USP19O94966 1318 aa8.42□□□□□ -1.06
CHD1L-206ENST00000469625 AKAP12Q02952 1782 aa8.41□□□□□ -1.06
CHD1L-206ENST00000469625 CPSF1Q10570 1443 aaKnown RBP8.41□□□□□ -1.06
CHD1L-206ENST00000469625 KTN1Q86UP2 1357 aaKnown RBP8.41□□□□□ -1.06
CHD1L-206ENST00000469625 KIAA0232Q92628 1395 aa8.41□□□□□ -1.06
CHD1L-206ENST00000469625 NINLQ9Y2I6 1382 aa8.41□□□□□ -1.06
CHD1L-206ENST00000469625 FAM83GA6ND36 823 aa8.41□□□□□ -1.06
CHD1L-206ENST00000469625 TMC1Q8TDI8 760 aa8.41□□□□□ -1.06
CHD1L-206ENST00000469625 GJD4Q96KN9 370 aaPredicted RBP8.41□□□□□ -1.06
CHD1L-206ENST00000469625 PUS7Q96PZ0 661 aaKnown RBP8.41□□□□□ -1.06
CHD1L-206ENST00000469625 TESK2Q96S53 571 aa8.41□□□□□ -1.06
CHD1L-206ENST00000469625 NRAPQ86VF7 1730 aa8.4□□□□□ -1.06
CHD1L-206ENST00000469625 SSH2Q76I76 1423 aa8.4□□□□□ -1.06
CHD1L-206ENST00000469625 TTC21AQ8NDW8 1320 aa8.4□□□□□ -1.06
CHD1L-206ENST00000469625 TMF1P82094 1093 aa8.4□□□□□ -1.06
CHD1L-206ENST00000469625 VPS72Q15906 364 aa8.4□□□□□ -1.06
CHD1L-206ENST00000469625 HDGFL2Q7Z4V5 671 aaPredicted RBP8.4□□□□□ -1.06
CHD1L-206ENST00000469625 BTG4Q9NY30 223 aa8.4□□□□□ -1.06
CHD1L-206ENST00000469625 CCDC9Q9Y3X0 531 aaKnown RBP8.4□□□□□ -1.06
CHD1L-206ENST00000469625 MON2Q7Z3U7 1717 aa8.4□□□□□ -1.07
CHD1L-206ENST00000469625 PIK3C2AO00443 1686 aa8.4□□□□□ -1.07
CHD1L-206ENST00000469625 GLI3P10071 1580 aa8.39□□□□□ -1.07
CHD1L-206ENST00000469625 SLIT3O75094 1523 aa8.39□□□□□ -1.07
CHD1L-206ENST00000469625 CPDO75976 1380 aa8.39□□□□□ -1.07
CHD1L-206ENST00000469625 TTC21BQ7Z4L5 1316 aa8.39□□□□□ -1.07
CHD1L-206ENST00000469625 NLRP6P59044 892 aa8.39□□□□□ -1.07
CHD1L-206ENST00000469625 ZC3H6P61129 1189 aaKnown RBP8.39□□□□□ -1.07
CHD1L-206ENST00000469625 TERF2IPQ9NYB0 399 aa8.39□□□□□ -1.07
CHD1L-206ENST00000469625 CD163L1Q9NR16 1453 aa8.38□□□□□ -1.07
CHD1L-206ENST00000469625 EDC4Q6P2E9 1401 aaKnown RBP8.38□□□□□ -1.07
CHD1L-206ENST00000469625 GSE1Q14687 1217 aa8.38□□□□□ -1.07
CHD1L-206ENST00000469625 CHRNA2Q15822 529 aa8.38□□□□□ -1.07
CHD1L-206ENST00000469625 CDCA8Q53HL2 280 aa8.38□□□□□ -1.07
CHD1L-206ENST00000469625 A0A1W2PP64 1363 aa8.37□□□□□ -1.07
CHD1L-206ENST00000469625 A0A0G2JS52 829 aa8.37□□□□□ -1.07
CHD1L-206ENST00000469625 RIOK3O14730 519 aaKnown RBP8.37□□□□□ -1.07
CHD1L-206ENST00000469625 GCP02774 474 aa8.37□□□□□ -1.07
CHD1L-206ENST00000469625 MNX1P50219 401 aaPredicted RBP8.37□□□□□ -1.07
CHD1L-206ENST00000469625 MYT1Q01538 1121 aa8.37□□□□□ -1.07
CHD1L-206ENST00000469625 KCNH5Q8NCM2 988 aa8.37□□□□□ -1.07
CHD1L-206ENST00000469625 SLC12A5Q9H2X9 1139 aa8.37□□□□□ -1.07
CHD1L-206ENST00000469625 SPATA31A5Q5VU36 1347 aa8.36□□□□□ -1.07
CHD1L-206ENST00000469625 SPATA31A7Q8IWB4 1347 aa8.36□□□□□ -1.07
CHD1L-206ENST00000469625 ZBTB7CA1YPR0 619 aa8.36□□□□□ -1.07
CHD1L-206ENST00000469625 BRPF1P55201 1214 aaPredicted RBP8.36□□□□□ -1.07
CHD1L-206ENST00000469625 SUGP2Q8IX01 1082 aaKnown RBP eCLIP8.36□□□□□ -1.07
CHD1L-206ENST00000469625 FAM212AQ96EL1 285 aa8.36□□□□□ -1.07
CHD1L-206ENST00000469625 STRN4Q9NRL3 753 aa8.36□□□□□ -1.07
CHD1L-206ENST00000469625 LMO7Q8WWI1 1683 aa8.36□□□□□ -1.07
CHD1L-206ENST00000469625 AATKQ6ZMQ8 1374 aa8.35□□□□□ -1.07
CHD1L-206ENST00000469625 ANKRD36BQ8N2N9 1353 aa8.35□□□□□ -1.07
CHD1L-206ENST00000469625 USP54Q70EL1 1684 aa8.35□□□□□ -1.07
CHD1L-206ENST00000469625 CAMTA1Q9Y6Y1 1673 aa8.35□□□□□ -1.07
CHD1L-206ENST00000469625 SOX12O15370 315 aa8.35□□□□□ -1.07
CHD1L-206ENST00000469625 EVA1CP58658 441 aa8.35□□□□□ -1.07
CHD1L-206ENST00000469625 DHX30Q7L2E3 1194 aaKnown RBP eCLIP8.35□□□□□ -1.07
CHD1L-206ENST00000469625 NME9Q86XW9 330 aa8.35□□□□□ -1.07
CHD1L-206ENST00000469625 SEPT12Q8IYM1 358 aa8.35□□□□□ -1.07
CHD1L-206ENST00000469625 UPF1Q92900 1129 aaKnown RBP eCLIP8.35□□□□□ -1.07
CHD1L-206ENST00000469625 RYDENQ9NUL5 291 aaKnown RBP8.35□□□□□ -1.07
CHD1L-206ENST00000469625 USP31Q70CQ4 1352 aa8.35□□□□□ -1.07
CHD1L-206ENST00000469625 NFAT5O94916 1531 aa8.34□□□□□ -1.07
CHD1L-206ENST00000469625 SPATA31A1Q5TZJ5 1347 aa8.34□□□□□ -1.07
CHD1L-206ENST00000469625 COL5A2P05997 1499 aaPredicted RBP8.34□□□□□ -1.07
CHD1L-206ENST00000469625 HAX1O00165 279 aa8.34□□□□□ -1.07
CHD1L-206ENST00000469625 EIF4G2P78344 907 aaKnown RBP eCLIP8.34□□□□□ -1.07
CHD1L-206ENST00000469625 FAM98CQ17RN3 349 aaKnown RBP8.34□□□□□ -1.07
CHD1L-206ENST00000469625 ABCC6O95255 1503 aa8.34□□□□□ -1.08
CHD1L-206ENST00000469625 OVOS2A0A0J9YW53 1432 aa8.33□□□□□ -1.08
CHD1L-206ENST00000469625 ONECUT3O60422 494 aaPredicted RBP8.33□□□□□ -1.08
CHD1L-206ENST00000469625 OVOS2Q6IE36 1432 aa8.33□□□□□ -1.08
CHD1L-206ENST00000469625 KRT27Q7Z3Y8 459 aa8.33□□□□□ -1.08
CHD1L-206ENST00000469625 THSD7AQ9UPZ6 1657 aa8.33□□□□□ -1.08
CHD1L-206ENST00000469625 CRB1P82279 1406 aa8.32□□□□□ -1.08
CHD1L-206ENST00000469625 STK25O00506 426 aa8.32□□□□□ -1.08
CHD1L-206ENST00000469625 HSPA5P11021 654 aaKnown RBP8.32□□□□□ -1.08
CHD1L-206ENST00000469625 CD44P16070 742 aaKnown RBP8.32□□□□□ -1.08
CHD1L-206ENST00000469625 DCAF8Q5TAQ9 597 aa8.32□□□□□ -1.08
CHD1L-206ENST00000469625 LARP1Q6PKG0 1096 aaKnown RBP8.32□□□□□ -1.08
CHD1L-206ENST00000469625 ARHGEF25Q86VW2 580 aa8.32□□□□□ -1.08
Retrieved 100 of 20,778 RNA–protein pairs in 65.4 ms