RNA–Protein interactions for RNA: ENST00000469334.5

SMARCE1-207, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily e, member 1, humanhuman

TSL 5

Gene SMARCE1, Length 2,128 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCE1-207ENST00000469334 ABCC11Q96J66 1382 aa10.96□□□□□ -0.65
SMARCE1-207ENST00000469334 NCBP1Q09161 790 aaKnown RBP10.96□□□□□ -0.66
SMARCE1-207ENST00000469334 ATF7IPQ6VMQ6 1270 aa10.96□□□□□ -0.66
SMARCE1-207ENST00000469334 ITPRIPQ8IWB1 547 aa10.96□□□□□ -0.66
SMARCE1-207ENST00000469334 BCL2L13Q9BXK5 485 aa10.96□□□□□ -0.66
SMARCE1-207ENST00000469334 TDRD9Q8NDG6 1382 aaKnown RBP10.95□□□□□ -0.66
SMARCE1-207ENST00000469334 MAST1Q9Y2H9 1570 aa10.95□□□□□ -0.66
SMARCE1-207ENST00000469334 URB2Q14146 1524 aaKnown RBP10.95□□□□□ -0.66
SMARCE1-207ENST00000469334 TRIM27P14373 513 aa10.95□□□□□ -0.66
SMARCE1-207ENST00000469334 ATAD2Q6PL18 1390 aa10.95□□□□□ -0.66
SMARCE1-207ENST00000469334 IFT140Q96RY7 1462 aa10.95□□□□□ -0.66
SMARCE1-207ENST00000469334 NOS1P29475 1434 aa10.95□□□□□ -0.66
SMARCE1-207ENST00000469334 DISP1Q96F81 1524 aa10.95□□□□□ -0.66
SMARCE1-207ENST00000469334 SMTNL1A8MU46 457 aa10.94□□□□□ -0.66
SMARCE1-207ENST00000469334 GOLGA6L6A8MZA4 724 aa10.94□□□□□ -0.66
SMARCE1-207ENST00000469334 TCP11L2Q8N4U5 519 aa10.94□□□□□ -0.66
SMARCE1-207ENST00000469334 LNPKQ9C0E8 428 aa10.94□□□□□ -0.66
SMARCE1-207ENST00000469334 MYOM2P54296 1465 aa10.94□□□□□ -0.66
SMARCE1-207ENST00000469334 IGSF3O75054 1194 aa10.94□□□□□ -0.66
SMARCE1-207ENST00000469334 ADCY5O95622 1261 aa10.94□□□□□ -0.66
SMARCE1-207ENST00000469334 TTC12Q9H892 705 aaPredicted RBP10.94□□□□□ -0.66
SMARCE1-207ENST00000469334 EFCC1Q9HA90 598 aa10.94□□□□□ -0.66
SMARCE1-207ENST00000469334 SMC4Q9NTJ3 1288 aa10.94□□□□□ -0.66
SMARCE1-207ENST00000469334 ZDHHC9Q9Y397 364 aa10.94□□□□□ -0.66
SMARCE1-207ENST00000469334 TARBP1Q13395 1621 aaKnown RBP10.94□□□□□ -0.66
SMARCE1-207ENST00000469334 TSPY4P0CV99 314 aa10.93□□□□□ -0.66
SMARCE1-207ENST00000469334 TSPY10P0CW01 314 aa10.93□□□□□ -0.66
SMARCE1-207ENST00000469334 RGS22Q8NE09 1264 aa10.93□□□□□ -0.66
SMARCE1-207ENST00000469334 USP25Q9UHP3 1055 aa10.93□□□□□ -0.66
SMARCE1-207ENST00000469334 FAM177BA6PVY3 158 aa10.93□□□□□ -0.66
SMARCE1-207ENST00000469334 IPO8O15397 1037 aaKnown RBP10.93□□□□□ -0.66
SMARCE1-207ENST00000469334 KIF18AQ8NI77 898 aa10.93□□□□□ -0.66
SMARCE1-207ENST00000469334 MYO3AQ8NEV4 1616 aa10.92□□□□□ -0.66
SMARCE1-207ENST00000469334 PKP1Q13835 747 aa10.92□□□□□ -0.66
SMARCE1-207ENST00000469334 RGL3Q3MIN7 710 aa10.92□□□□□ -0.66
SMARCE1-207ENST00000469334 ZFP91Q96JP5 570 aaPredicted RBP10.92□□□□□ -0.66
SMARCE1-207ENST00000469334 NSFL1CQ9UNZ2 370 aaKnown RBP10.92□□□□□ -0.66
SMARCE1-207ENST00000469334 FAM53CQ9NYF3 392 aa10.91□□□□□ -0.66
SMARCE1-207ENST00000469334 ZNF777Q9ULD5 760 aaPredicted RBP10.91□□□□□ -0.66
SMARCE1-207ENST00000469334 PAXBP1Q9Y5B6 917 aa10.91□□□□□ -0.66
SMARCE1-207ENST00000469334 ZNF518AQ6AHZ1 1483 aa10.91□□□□□ -0.66
SMARCE1-207ENST00000469334 BRD1O95696 1058 aa10.91□□□□□ -0.66
SMARCE1-207ENST00000469334 CAPN2P17655 700 aa10.91□□□□□ -0.66
SMARCE1-207ENST00000469334 ZNF397Q8NF99 534 aaPredicted RBP10.91□□□□□ -0.66
SMARCE1-207ENST00000469334 ARID3CA6NKF2 412 aa10.9□□□□□ -0.66
SMARCE1-207ENST00000469334 KDM4AO75164 1064 aa10.9□□□□□ -0.66
SMARCE1-207ENST00000469334 MCM2P49736 904 aa10.9□□□□□ -0.66
SMARCE1-207ENST00000469334 CCDC183Q5T5S1 534 aa10.9□□□□□ -0.66
SMARCE1-207ENST00000469334 ERCC6Q03468 1493 aa10.9□□□□□ -0.66
SMARCE1-207ENST00000469334 SLFNL1Q499Z3 407 aa10.9□□□□□ -0.67
SMARCE1-207ENST00000469334 C17orf53Q8N3J3 647 aaPredicted RBP10.9□□□□□ -0.67
SMARCE1-207ENST00000469334 TMEM57Q8N5G2 664 aa10.9□□□□□ -0.67
SMARCE1-207ENST00000469334 USP26Q9BXU7 913 aa10.9□□□□□ -0.67
SMARCE1-207ENST00000469334 IL16Q14005 1332 aa10.89□□□□□ -0.67
SMARCE1-207ENST00000469334 TRIM6-TRIM34B2RNG4 842 aa10.89□□□□□ -0.67
SMARCE1-207ENST00000469334 INTS3Q68E01 1043 aaKnown RBP10.89□□□□□ -0.67
SMARCE1-207ENST00000469334 TMEM87AQ8NBN3 555 aa10.89□□□□□ -0.67
SMARCE1-207ENST00000469334 TRIM34Q9BYJ4 488 aa10.89□□□□□ -0.67
SMARCE1-207ENST00000469334 GEMIN8Q9NWZ8 242 aaKnown RBP10.89□□□□□ -0.67
SMARCE1-207ENST00000469334 ABCA6Q8N139 1617 aa10.89□□□□□ -0.67
SMARCE1-207ENST00000469334 PPIP5K1Q6PFW1 1433 aa10.89□□□□□ -0.67
SMARCE1-207ENST00000469334 PDS5BQ9NTI5 1447 aa10.89□□□□□ -0.67
SMARCE1-207ENST00000469334 ERVK-7P63135 1459 aa10.89□□□□□ -0.67
SMARCE1-207ENST00000469334 ANKRD45Q5TZF3 282 aa10.88□□□□□ -0.67
SMARCE1-207ENST00000469334 CTR9Q6PD62 1173 aa10.88□□□□□ -0.67
SMARCE1-207ENST00000469334 ZGPATQ8N5A5 531 aaKnown RBP10.88□□□□□ -0.67
SMARCE1-207ENST00000469334 CDC42BPBQ9Y5S2 1711 aa10.88□□□□□ -0.67
SMARCE1-207ENST00000469334 INO80Q9ULG1 1556 aaPredicted RBP10.88□□□□□ -0.67
SMARCE1-207ENST00000469334 ZBTB7CA1YPR0 619 aa10.88□□□□□ -0.67
SMARCE1-207ENST00000469334 NEUROD2Q15784 382 aa10.88□□□□□ -0.67
SMARCE1-207ENST00000469334 ALDH1L2Q3SY69 923 aa10.88□□□□□ -0.67
SMARCE1-207ENST00000469334 CASC1Q6TDU7 716 aa10.88□□□□□ -0.67
SMARCE1-207ENST00000469334 RRP7AQ9Y3A4 280 aaKnown RBP10.88□□□□□ -0.67
SMARCE1-207ENST00000469334 CFAP65Q6ZU64 1925 aaKnown RBP10.88□□□□□ -0.67
SMARCE1-207ENST00000469334 NEURL4Q96JN8 1562 aa10.88□□□□□ -0.67
SMARCE1-207ENST00000469334 MMP14P50281 582 aa10.87□□□□□ -0.67
SMARCE1-207ENST00000469334 RNF20Q5VTR2 975 aa10.87□□□□□ -0.67
SMARCE1-207ENST00000469334 SSH1Q8WYL5 1049 aa10.87□□□□□ -0.67
SMARCE1-207ENST00000469334 INTS4Q96HW7 963 aaKnown RBP10.87□□□□□ -0.67
SMARCE1-207ENST00000469334 CFAP53Q96M91 514 aa10.87□□□□□ -0.67
SMARCE1-207ENST00000469334 KCNF1Q9H3M0 494 aa10.87□□□□□ -0.67
SMARCE1-207ENST00000469334 FEZ2Q9UHY8 353 aaPredicted RBP10.87□□□□□ -0.67
SMARCE1-207ENST00000469334 PYCARDQ9ULZ3 195 aa10.87□□□□□ -0.67
SMARCE1-207ENST00000469334 PIK3R4Q99570 1358 aa10.87□□□□□ -0.67
SMARCE1-207ENST00000469334 CYP2C19P33261 490 aa10.87□□□□□ -0.67
SMARCE1-207ENST00000469334 BRPF1P55201 1214 aaPredicted RBP10.87□□□□□ -0.67
SMARCE1-207ENST00000469334 CCDC112Q8NEF3 446 aa10.87□□□□□ -0.67
SMARCE1-207ENST00000469334 PREX2Q70Z35 1606 aa10.86□□□□□ -0.67
SMARCE1-207ENST00000469334 REC8O95072 547 aa10.86□□□□□ -0.67
SMARCE1-207ENST00000469334 MX1P20591 662 aa10.86□□□□□ -0.67
SMARCE1-207ENST00000469334 ZNF428Q96B54 188 aa10.86□□□□□ -0.67
SMARCE1-207ENST00000469334 NOB1Q9ULX3 412 aaKnown RBP10.86□□□□□ -0.67
SMARCE1-207ENST00000469334 TRAPPC8Q9Y2L5 1435 aa10.85□□□□□ -0.67
SMARCE1-207ENST00000469334 SBNO2Q9Y2G9 1366 aa10.85□□□□□ -0.67
SMARCE1-207ENST00000469334 BRD2P25440 801 aaKnown RBP10.85□□□□□ -0.67
SMARCE1-207ENST00000469334 CUL4AQ13619 759 aa10.85□□□□□ -0.67
SMARCE1-207ENST00000469334 PLPPR3Q6T4P5 718 aa10.85□□□□□ -0.67
SMARCE1-207ENST00000469334 TCHHQ07283 1943 aa10.85□□□□□ -0.67
SMARCE1-207ENST00000469334 EXOSC9Q06265 439 aaKnown RBP10.85□□□□□ -0.67
SMARCE1-207ENST00000469334 MUM1L1Q5H9M0 696 aa10.85□□□□□ -0.67
Retrieved 100 of 20,778 RNA–protein pairs in 49.5 ms