RNA–Protein interactions for RNA: ENST00000469163.1

NUP50-214, Transcript of nucleoporin 50, humanhuman

TSL 2

Gene NUP50, Length 3,507 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUP50-214ENST00000469163 IRX5P78411 483 aaPredicted RBP12.36□□□□□ -0.43
NUP50-214ENST00000469163 OFD1O75665 1012 aa12.35□□□□□ -0.43
NUP50-214ENST00000469163 PRKAR2BP31323 418 aa12.35□□□□□ -0.43
NUP50-214ENST00000469163 HSP90AB2PQ58FF8 381 aa12.35□□□□□ -0.43
NUP50-214ENST00000469163 SULT6B1Q6IMI4 303 aa12.35□□□□□ -0.43
NUP50-214ENST00000469163 TCP11L2Q8N4U5 519 aa12.35□□□□□ -0.43
NUP50-214ENST00000469163 DNAJC2Q99543 621 aaKnown RBP12.35□□□□□ -0.43
NUP50-214ENST00000469163 YTHDC2Q9H6S0 1430 aaKnown RBP12.35□□□□□ -0.43
NUP50-214ENST00000469163 TMEM2Q9UHN6 1383 aa12.35□□□□□ -0.43
NUP50-214ENST00000469163 E9PCH4 1651 aa12.35□□□□□ -0.43
NUP50-214ENST00000469163 ZMYM4Q5VZL5 1548 aa12.34□□□□□ -0.43
NUP50-214ENST00000469163 ADAMTS2O95450 1211 aa12.33□□□□□ -0.43
NUP50-214ENST00000469163 FAM43BQ6ZT52 329 aaPredicted RBP12.33□□□□□ -0.43
NUP50-214ENST00000469163 GRPEL1Q9HAV7 217 aa12.33□□□□□ -0.43
NUP50-214ENST00000469163 NLRP2Q9NX02 1062 aa12.33□□□□□ -0.43
NUP50-214ENST00000469163 IQGAP3Q86VI3 1631 aa12.33□□□□□ -0.44
NUP50-214ENST00000469163 ZBED9Q6R2W3 1325 aa12.33□□□□□ -0.44
NUP50-214ENST00000469163 APBB1O00213 710 aa12.33□□□□□ -0.44
NUP50-214ENST00000469163 FAM83GA6ND36 823 aa12.32□□□□□ -0.44
NUP50-214ENST00000469163 ROBO2Q9HCK4 1378 aa12.32□□□□□ -0.44
NUP50-214ENST00000469163 ZNF622Q969S3 477 aaKnown RBP eCLIP12.32□□□□□ -0.44
NUP50-214ENST00000469163 RCAN3Q9UKA8 241 aa12.32□□□□□ -0.44
NUP50-214ENST00000469163 PHF8Q9UPP1 1060 aa12.32□□□□□ -0.44
NUP50-214ENST00000469163 ERVK-7P63135 1459 aa12.32□□□□□ -0.44
NUP50-214ENST00000469163 KAT6BQ8WYB5 2073 aa12.31□□□□□ -0.44
NUP50-214ENST00000469163 A0A1W2PP64 1363 aa12.31□□□□□ -0.44
NUP50-214ENST00000469163 FSD2A1L4K1 749 aa12.31□□□□□ -0.44
NUP50-214ENST00000469163 ZNF335Q9H4Z2 1342 aaPredicted RBP12.31□□□□□ -0.44
NUP50-214ENST00000469163 VWDEQ8N2E2 1590 aa12.31□□□□□ -0.44
NUP50-214ENST00000469163 EXOC6Q8TAG9 804 aa12.31□□□□□ -0.44
NUP50-214ENST00000469163 PTPRTO14522 1441 aa12.31□□□□□ -0.44
NUP50-214ENST00000469163 TRIM6-TRIM34B2RNG4 842 aa12.31□□□□□ -0.44
NUP50-214ENST00000469163 GOLGA2Q08379 1002 aa12.31□□□□□ -0.44
NUP50-214ENST00000469163 TRIM34Q9BYJ4 488 aa12.31□□□□□ -0.44
NUP50-214ENST00000469163 EFCAB6Q5THR3 1501 aa12.3□□□□□ -0.44
NUP50-214ENST00000469163 SRCAPQ6ZRS2 3230 aa12.3□□□□□ -0.44
NUP50-214ENST00000469163 EIF2AK4Q9P2K8 1649 aaKnown RBP12.3□□□□□ -0.44
NUP50-214ENST00000469163 SYTL4Q96C24 671 aaPredicted RBP12.3□□□□□ -0.44
NUP50-214ENST00000469163 DYNC1I1O14576 645 aa12.29□□□□□ -0.44
NUP50-214ENST00000469163 LRRC59Q96AG4 307 aaKnown RBP12.29□□□□□ -0.44
NUP50-214ENST00000469163 GTF3C5Q9Y5Q8 519 aaPredicted RBP12.29□□□□□ -0.44
NUP50-214ENST00000469163 RNF17Q9BXT8 1623 aaKnown RBP12.29□□□□□ -0.44
NUP50-214ENST00000469163 MCM10Q7L590 875 aa12.29□□□□□ -0.44
NUP50-214ENST00000469163 BCAR3O75815 825 aa12.28□□□□□ -0.44
NUP50-214ENST00000469163 TERF1P54274 439 aa12.28□□□□□ -0.44
NUP50-214ENST00000469163 EP400NLQ6ZTU2 488 aa12.28□□□□□ -0.44
NUP50-214ENST00000469163 TAOK2Q9UL54 1235 aa12.28□□□□□ -0.44
NUP50-214ENST00000469163 DMRT2Q9Y5R5 561 aa12.28□□□□□ -0.44
NUP50-214ENST00000469163 CLTCQ00610 1675 aaKnown RBP12.28□□□□□ -0.44
NUP50-214ENST00000469163 PPIP5K1Q6PFW1 1433 aa12.28□□□□□ -0.44
NUP50-214ENST00000469163 PRR29P0C7W0 189 aa12.28□□□□□ -0.44
NUP50-214ENST00000469163 ZSCAN30Q86W11 494 aa12.28□□□□□ -0.44
NUP50-214ENST00000469163 RTF1Q92541 710 aaKnown RBP12.28□□□□□ -0.44
NUP50-214ENST00000469163 PRR36Q9H6K5 1346 aa12.28□□□□□ -0.44
NUP50-214ENST00000469163 TRPM2O94759 1503 aa12.27□□□□□ -0.44
NUP50-214ENST00000469163 BCORL1Q5H9F3 1711 aa12.27□□□□□ -0.44
NUP50-214ENST00000469163 PSEN1P49768 467 aa12.27□□□□□ -0.44
NUP50-214ENST00000469163 EVA1CP58658 441 aa12.27□□□□□ -0.44
NUP50-214ENST00000469163 BECN1Q14457 450 aa12.27□□□□□ -0.44
NUP50-214ENST00000469163 AXDND1Q5T1B0 1012 aaPredicted RBP12.27□□□□□ -0.45
NUP50-214ENST00000469163 EIF2S2P20042 333 aaKnown RBP12.27□□□□□ -0.45
NUP50-214ENST00000469163 MMP14P50281 582 aa12.27□□□□□ -0.45
NUP50-214ENST00000469163 SPDYE4A6NLX3 237 aa12.26□□□□□ -0.45
NUP50-214ENST00000469163 TNNT3P45378 269 aaPredicted RBP12.26□□□□□ -0.45
NUP50-214ENST00000469163 SPINK5Q9NQ38 1064 aaPredicted RBP12.26□□□□□ -0.45
NUP50-214ENST00000469163 ARHGEF40Q8TER5 1519 aa12.26□□□□□ -0.45
NUP50-214ENST00000469163 KRT28Q7Z3Y7 464 aa12.26□□□□□ -0.45
NUP50-214ENST00000469163 KDM4FA0A1W2PPD8 638 aa12.25□□□□□ -0.45
NUP50-214ENST00000469163 SLC4A10Q6U841 1118 aa12.25□□□□□ -0.45
NUP50-214ENST00000469163 A2ML1A8K2U0 1454 aa12.25□□□□□ -0.45
NUP50-214ENST00000469163 DDX54Q8TDD1 881 aaKnown RBP12.25□□□□□ -0.45
NUP50-214ENST00000469163 PHACTR3Q96KR7 559 aa12.24□□□□□ -0.45
NUP50-214ENST00000469163 SMC4Q9NTJ3 1288 aa12.24□□□□□ -0.45
NUP50-214ENST00000469163 POLKQ9UBT6 870 aa12.24□□□□□ -0.45
NUP50-214ENST00000469163 COG6Q9Y2V7 657 aa12.24□□□□□ -0.45
NUP50-214ENST00000469163 C20orf194Q5TEA3 1177 aa12.24□□□□□ -0.45
NUP50-214ENST00000469163 TBX22Q9Y458 520 aa12.24□□□□□ -0.45
NUP50-214ENST00000469163 LOC102724159A0A0B4J2E5 919 aa12.24□□□□□ -0.45
NUP50-214ENST00000469163 PIK3C2GO75747 1445 aa12.24□□□□□ -0.45
NUP50-214ENST00000469163 PWP2Q15269 919 aaKnown RBP12.24□□□□□ -0.45
NUP50-214ENST00000469163 FBXO3Q9UK99 471 aa12.24□□□□□ -0.45
NUP50-214ENST00000469163 GPRASP1Q5JY77 1395 aa12.24□□□□□ -0.45
NUP50-214ENST00000469163 ATAD2Q6PL18 1390 aa12.24□□□□□ -0.45
NUP50-214ENST00000469163 SPRYD3Q8NCJ5 442 aa12.23□□□□□ -0.45
NUP50-214ENST00000469163 PANK1Q8TE04 598 aa12.23□□□□□ -0.45
NUP50-214ENST00000469163 ZNF592Q92610 1267 aa12.23□□□□□ -0.45
NUP50-214ENST00000469163 TET3O43151 1660 aa12.23□□□□□ -0.45
NUP50-214ENST00000469163 TTC21BQ7Z4L5 1316 aa12.23□□□□□ -0.45
NUP50-214ENST00000469163 TRAK2O60296 914 aa12.23□□□□□ -0.45
NUP50-214ENST00000469163 PLCD4Q9BRC7 762 aa12.23□□□□□ -0.45
NUP50-214ENST00000469163 PRDM11Q9NQV5 511 aa12.23□□□□□ -0.45
NUP50-214ENST00000469163 KRT24Q2M2I5 525 aa12.23□□□□□ -0.45
NUP50-214ENST00000469163 TRERF1Q96PN7 1200 aa12.23□□□□□ -0.45
NUP50-214ENST00000469163 TPRNQ4KMQ1 711 aa12.22□□□□□ -0.45
NUP50-214ENST00000469163 TICAM2Q86XR7 235 aa12.22□□□□□ -0.45
NUP50-214ENST00000469163 RUNDC1Q96C34 613 aa12.22□□□□□ -0.45
NUP50-214ENST00000469163 BRD4O60885 1362 aaPredicted RBP12.22□□□□□ -0.45
NUP50-214ENST00000469163 SETD1BQ9UPS6 1966 aaKnown RBP12.21□□□□□ -0.45
NUP50-214ENST00000469163 BANK1Q8NDB2 785 aa12.21□□□□□ -0.45
NUP50-214ENST00000469163 SPHKAPQ2M3C7 1700 aa12.21□□□□□ -0.45
Retrieved 100 of 20,778 RNA–protein pairs in 35.8 ms