RNA–Protein interactions for RNA: ENST00000469129.1

SMC1A-205, Transcript of structural maintenance of chromosomes 1A, humanhuman

TSL 3

Gene SMC1A, Length 847 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMC1A-205ENST00000469129 RSPH6AQ9H0K4 717 aa12.18□□□□□ -0.46
SMC1A-205ENST00000469129 FAM208AQ9UK61 1670 aaKnown RBP12.18□□□□□ -0.46
SMC1A-205ENST00000469129 TMPOP42166 694 aaKnown RBP12.17□□□□□ -0.46
SMC1A-205ENST00000469129 PIP4K2BP78356 416 aa12.17□□□□□ -0.46
SMC1A-205ENST00000469129 LMOD3Q0VAK6 560 aa12.17□□□□□ -0.46
SMC1A-205ENST00000469129 NEUROD2Q15784 382 aa12.17□□□□□ -0.46
SMC1A-205ENST00000469129 RRP7AQ9Y3A4 280 aaKnown RBP12.17□□□□□ -0.46
SMC1A-205ENST00000469129 MST1RQ04912 1400 aa12.17□□□□□ -0.46
SMC1A-205ENST00000469129 CRYBG1Q9Y4K1 1723 aa12.17□□□□□ -0.46
SMC1A-205ENST00000469129 CAMTA1Q9Y6Y1 1673 aa12.16□□□□□ -0.46
SMC1A-205ENST00000469129 PRKAR2BP31323 418 aa12.16□□□□□ -0.46
SMC1A-205ENST00000469129 NLRP6P59044 892 aa12.16□□□□□ -0.46
SMC1A-205ENST00000469129 CALD1Q05682 793 aaKnown RBP12.16□□□□□ -0.46
SMC1A-205ENST00000469129 ESCO1Q5FWF5 840 aa12.16□□□□□ -0.46
SMC1A-205ENST00000469129 RBM33Q96EV2 1170 aaKnown RBP12.16□□□□□ -0.46
SMC1A-205ENST00000469129 C19orf44Q9H6X5 657 aa12.16□□□□□ -0.46
SMC1A-205ENST00000469129 MSH6P52701 1360 aa12.16□□□□□ -0.46
SMC1A-205ENST00000469129 ABCC6O95255 1503 aa12.16□□□□□ -0.46
SMC1A-205ENST00000469129 LRRC37A3O60309 1634 aa12.15□□□□□ -0.46
SMC1A-205ENST00000469129 CT47B1P0C2W7 299 aaPredicted RBP12.15□□□□□ -0.46
SMC1A-205ENST00000469129 VIRMAQ69YN4 1812 aaKnown RBP12.15□□□□□ -0.46
SMC1A-205ENST00000469129 MAP3K19Q56UN5 1328 aa12.14□□□□□ -0.47
SMC1A-205ENST00000469129 MED1Q15648 1581 aaPredicted RBP12.14□□□□□ -0.47
SMC1A-205ENST00000469129 PAK3O75914 559 aaPredicted RBP12.14□□□□□ -0.47
SMC1A-205ENST00000469129 ATF3P18847 181 aa12.14□□□□□ -0.47
SMC1A-205ENST00000469129 PSME1Q06323 249 aa12.14□□□□□ -0.47
SMC1A-205ENST00000469129 NFE2L2Q16236 605 aa12.14□□□□□ -0.47
SMC1A-205ENST00000469129 ABTB2Q8N961 1025 aa12.14□□□□□ -0.47
SMC1A-205ENST00000469129 RGPD2P0DJD1 1756 aa12.13□□□□□ -0.47
SMC1A-205ENST00000469129 FBLN1P23142 703 aa12.13□□□□□ -0.47
SMC1A-205ENST00000469129 AMPHP49418 695 aa12.13□□□□□ -0.47
SMC1A-205ENST00000469129 RIPK4P57078 832 aa12.13□□□□□ -0.47
SMC1A-205ENST00000469129 EIF4A2Q14240 407 aaKnown RBP12.13□□□□□ -0.47
SMC1A-205ENST00000469129 KCNH5Q8NCM2 988 aa12.13□□□□□ -0.47
SMC1A-205ENST00000469129 HMOX1P09601 288 aa12.12□□□□□ -0.47
SMC1A-205ENST00000469129 CADPS2Q86UW7 1296 aa12.12□□□□□ -0.47
SMC1A-205ENST00000469129 SPINK5Q9NQ38 1064 aaPredicted RBP12.12□□□□□ -0.47
SMC1A-205ENST00000469129 KDRP35968 1356 aa12.12□□□□□ -0.47
SMC1A-205ENST00000469129 RGPD5Q99666 1765 aa12.12□□□□□ -0.47
SMC1A-205ENST00000469129 TRIM35Q9UPQ4 493 aa12.11□□□□□ -0.47
SMC1A-205ENST00000469129 ABCA3Q99758 1704 aa12.11□□□□□ -0.47
SMC1A-205ENST00000469129 NHSL1Q5SYE7 1610 aa12.11□□□□□ -0.47
SMC1A-205ENST00000469129 FANCIQ9NVI1 1328 aa12.11□□□□□ -0.47
SMC1A-205ENST00000469129 LMO7Q8WWI1 1683 aa12.1□□□□□ -0.47
SMC1A-205ENST00000469129 SOX12O15370 315 aa12.1□□□□□ -0.47
SMC1A-205ENST00000469129 HSPA1LP34931 641 aa12.1□□□□□ -0.47
SMC1A-205ENST00000469129 CCDC136Q96JN2 1154 aa12.1□□□□□ -0.47
SMC1A-205ENST00000469129 USP19O94966 1318 aa12.1□□□□□ -0.47
SMC1A-205ENST00000469129 IGSF1Q8N6C5 1336 aa12.1□□□□□ -0.47
SMC1A-205ENST00000469129 HOXC9P31274 260 aa12.09□□□□□ -0.47
SMC1A-205ENST00000469129 HSP90AB2PQ58FF8 381 aa12.09□□□□□ -0.47
SMC1A-205ENST00000469129 TNS3Q68CZ2 1445 aa12.09□□□□□ -0.47
SMC1A-205ENST00000469129 PXDNQ92626 1479 aa12.08□□□□□ -0.47
SMC1A-205ENST00000469129 CANXP27824 592 aaKnown RBP12.08□□□□□ -0.48
SMC1A-205ENST00000469129 GNAI1P63096 354 aa12.08□□□□□ -0.48
SMC1A-205ENST00000469129 SULT6B1Q6IMI4 303 aa12.08□□□□□ -0.48
SMC1A-205ENST00000469129 ORAI2Q96SN7 254 aa12.08□□□□□ -0.48
SMC1A-205ENST00000469129 NPHP3Q7Z494 1330 aa12.08□□□□□ -0.48
SMC1A-205ENST00000469129 ROBO1Q9Y6N7 1651 aa12.07□□□□□ -0.48
SMC1A-205ENST00000469129 CACNA1FO60840 1977 aa12.07□□□□□ -0.48
SMC1A-205ENST00000469129 B4GALNT3Q6L9W6 998 aa12.07□□□□□ -0.48
SMC1A-205ENST00000469129 IFT57Q9NWB7 429 aa12.07□□□□□ -0.48
SMC1A-205ENST00000469129 COL18A1P39060 1754 aa12.06□□□□□ -0.48
SMC1A-205ENST00000469129 FOXO3O43524 673 aa12.06□□□□□ -0.48
SMC1A-205ENST00000469129 MS4A1P11836 297 aa12.06□□□□□ -0.48
SMC1A-205ENST00000469129 PDE3AQ14432 1141 aa12.06□□□□□ -0.48
SMC1A-205ENST00000469129 NUTM2GQ5VZR2 741 aa12.06□□□□□ -0.48
SMC1A-205ENST00000469129 KRT28Q7Z3Y7 464 aa12.06□□□□□ -0.48
SMC1A-205ENST00000469129 EXOC6Q8TAG9 804 aa12.06□□□□□ -0.48
SMC1A-205ENST00000469129 ZNF428Q96B54 188 aa12.06□□□□□ -0.48
SMC1A-205ENST00000469129 PHACTR3Q96KR7 559 aa12.06□□□□□ -0.48
SMC1A-205ENST00000469129 RARSP54136 660 aaKnown RBP12.05□□□□□ -0.48
SMC1A-205ENST00000469129 GAS2L2Q8NHY3 880 aa12.05□□□□□ -0.48
SMC1A-205ENST00000469129 IP6K1Q92551 441 aa12.05□□□□□ -0.48
SMC1A-205ENST00000469129 CRBNQ96SW2 442 aa12.05□□□□□ -0.48
SMC1A-205ENST00000469129 NCAPD2Q15021 1401 aa12.04□□□□□ -0.48
SMC1A-205ENST00000469129 PLIN1O60240 522 aa12.04□□□□□ -0.48
SMC1A-205ENST00000469129 HAP1P54257 671 aaPredicted RBP12.04□□□□□ -0.48
SMC1A-205ENST00000469129 AAMPQ13685 434 aa12.04□□□□□ -0.48
SMC1A-205ENST00000469129 AEBP1Q8IUX7 1158 aa12.04□□□□□ -0.48
SMC1A-205ENST00000469129 SLAIN2Q9P270 581 aa12.04□□□□□ -0.48
SMC1A-205ENST00000469129 KIF16BQ96L93 1317 aa12.04□□□□□ -0.48
SMC1A-205ENST00000469129 PARP4Q9UKK3 1724 aaKnown RBP12.03□□□□□ -0.48
SMC1A-205ENST00000469129 KDM3BQ7LBC6 1761 aa12.03□□□□□ -0.48
SMC1A-205ENST00000469129 EXOSC9Q06265 439 aaKnown RBP12.03□□□□□ -0.48
SMC1A-205ENST00000469129 TSR2Q969E8 191 aaKnown RBP12.03□□□□□ -0.48
SMC1A-205ENST00000469129 N4BP2Q86UW6 1770 aaPredicted RBP12.02□□□□□ -0.48
SMC1A-205ENST00000469129 BCAR3O75815 825 aa12.02□□□□□ -0.49
SMC1A-205ENST00000469129 ALDH1L2Q3SY69 923 aa12.02□□□□□ -0.49
SMC1A-205ENST00000469129 CFAP44Q96MT7 982 aa12.02□□□□□ -0.49
SMC1A-205ENST00000469129 EYA1Q99502 592 aa12.02□□□□□ -0.49
SMC1A-205ENST00000469129 PLEKHG2Q9H7P9 1386 aa12.02□□□□□ -0.49
SMC1A-205ENST00000469129 PKD1L3Q7Z443 1732 aa12.01□□□□□ -0.49
SMC1A-205ENST00000469129 SIPA1L3O60292 1781 aaPredicted RBP12.01□□□□□ -0.49
SMC1A-205ENST00000469129 HTATSF1O43719 755 aaKnown RBP12.01□□□□□ -0.49
SMC1A-205ENST00000469129 GCP02774 474 aa12.01□□□□□ -0.49
SMC1A-205ENST00000469129 ZNF853P0CG23 659 aa12.01□□□□□ -0.49
SMC1A-205ENST00000469129 XPCQ01831 940 aaPredicted RBP12.01□□□□□ -0.49
SMC1A-205ENST00000469129 LMOD2Q6P5Q4 547 aa12.01□□□□□ -0.49
SMC1A-205ENST00000469129 RTF1Q92541 710 aaKnown RBP12.01□□□□□ -0.49
Retrieved 100 of 20,778 RNA–protein pairs in 40 ms