RNA–Protein interactions for RNA: ENST00000468164.1

C9orf3-212, Transcript of chromosome 9 open reading frame 3, humanhuman

TSL 5

Gene C9orf3, Length 849 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
C9orf3-212ENST00000468164 USP54Q70EL1 1684 aa18.95■□□□□ 0.62
C9orf3-212ENST00000468164 NFAT5O94916 1531 aa18.95■□□□□ 0.62
C9orf3-212ENST00000468164 ST20-MTHFSA0A0A6YYL1 179 aa18.94■□□□□ 0.62
C9orf3-212ENST00000468164 PSDA5PKW4 1024 aaPredicted RBP18.94■□□□□ 0.62
C9orf3-212ENST00000468164 CSB-PGBD3P0DP91 1061 aa18.94■□□□□ 0.62
C9orf3-212ENST00000468164 NME9Q86XW9 330 aa18.94■□□□□ 0.62
C9orf3-212ENST00000468164 PCGF6Q9BYE7 350 aa18.94■□□□□ 0.62
C9orf3-212ENST00000468164 AXIN2Q9Y2T1 843 aa18.94■□□□□ 0.62
C9orf3-212ENST00000468164 THRAP3Q9Y2W1 955 aaKnown RBP18.94■□□□□ 0.62
C9orf3-212ENST00000468164 KAT6BQ8WYB5 2073 aa18.93■□□□□ 0.62
C9orf3-212ENST00000468164 ARHGEF25Q86VW2 580 aa18.93■□□□□ 0.62
C9orf3-212ENST00000468164 TERF2IPQ9NYB0 399 aa18.92■□□□□ 0.62
C9orf3-212ENST00000468164 APBA3O96018 575 aa18.91■□□□□ 0.62
C9orf3-212ENST00000468164 EZH2Q15910 746 aaKnown RBP18.91■□□□□ 0.62
C9orf3-212ENST00000468164 WDR17Q8IZU2 1322 aa18.91■□□□□ 0.62
C9orf3-212ENST00000468164 A0A1W2PP64 1363 aa18.91■□□□□ 0.62
C9orf3-212ENST00000468164 EDC4Q6P2E9 1401 aaKnown RBP18.9■□□□□ 0.62
C9orf3-212ENST00000468164 RREB1Q92766 1687 aa18.89■□□□□ 0.61
C9orf3-212ENST00000468164 DDB1Q16531 1140 aa18.89■□□□□ 0.61
C9orf3-212ENST00000468164 NUP188Q5SRE5 1749 aa18.88■□□□□ 0.61
C9orf3-212ENST00000468164 PEAK1Q9H792 1746 aa18.88■□□□□ 0.61
C9orf3-212ENST00000468164 TESK2Q96S53 571 aa18.88■□□□□ 0.61
C9orf3-212ENST00000468164 USP31Q70CQ4 1352 aa18.87■□□□□ 0.61
C9orf3-212ENST00000468164 USP47Q96K76 1375 aa18.87■□□□□ 0.61
C9orf3-212ENST00000468164 OVOS2A0A0G2JMS6 1433 aa18.86■□□□□ 0.61
C9orf3-212ENST00000468164 OVOS2A0A0J9YW53 1432 aa18.86■□□□□ 0.61
C9orf3-212ENST00000468164 DISP2A7MBM2 1401 aa18.86■□□□□ 0.61
C9orf3-212ENST00000468164 OVOS2Q6IE36 1432 aa18.86■□□□□ 0.61
C9orf3-212ENST00000468164 ABCC6O95255 1503 aa18.85■□□□□ 0.61
C9orf3-212ENST00000468164 R3HDM1Q15032 1099 aaKnown RBP18.85■□□□□ 0.61
C9orf3-212ENST00000468164 KIF20BQ96Q89 1820 aa18.85■□□□□ 0.61
C9orf3-212ENST00000468164 RGPD2P0DJD1 1756 aa18.84■□□□□ 0.61
C9orf3-212ENST00000468164 PUS7Q96PZ0 661 aaKnown RBP18.84■□□□□ 0.61
C9orf3-212ENST00000468164 CAMKK2Q96RR4 588 aa18.84■□□□□ 0.61
C9orf3-212ENST00000468164 LRP5O75197 1615 aa18.84■□□□□ 0.61
C9orf3-212ENST00000468164 TMF1P82094 1093 aa18.83■□□□□ 0.6
C9orf3-212ENST00000468164 CARD10Q9BWT7 1032 aa18.83■□□□□ 0.6
C9orf3-212ENST00000468164 NLRP2Q9NX02 1062 aa18.83■□□□□ 0.6
C9orf3-212ENST00000468164 SLC24A1O60721 1099 aa18.82■□□□□ 0.6
C9orf3-212ENST00000468164 NINLQ9Y2I6 1382 aa18.81■□□□□ 0.6
C9orf3-212ENST00000468164 CDCA7Q9BWT1 371 aaPredicted RBP18.81■□□□□ 0.6
C9orf3-212ENST00000468164 FAM208AQ9UK61 1670 aaKnown RBP18.81■□□□□ 0.6
C9orf3-212ENST00000468164 CCDC7Q96M83 1385 aa18.81■□□□□ 0.6
C9orf3-212ENST00000468164 RGPD3A6NKT7 1758 aaPredicted RBP18.8■□□□□ 0.6
C9orf3-212ENST00000468164 RGPD4Q7Z3J3 1758 aa18.8■□□□□ 0.6
C9orf3-212ENST00000468164 PARD3Q8TEW0 1356 aa18.8■□□□□ 0.6
C9orf3-212ENST00000468164 ERBB3P21860 1342 aa18.79■□□□□ 0.6
C9orf3-212ENST00000468164 C11orf95C9JLR9 678 aaPredicted RBP18.79■□□□□ 0.6
C9orf3-212ENST00000468164 EXOC5O00471 708 aa18.79■□□□□ 0.6
C9orf3-212ENST00000468164 MARCH10Q8NA82 808 aaPredicted RBP18.79■□□□□ 0.6
C9orf3-212ENST00000468164 ANKRD24Q8TF21 1146 aa18.79■□□□□ 0.6
C9orf3-212ENST00000468164 LTV1Q96GA3 475 aaPredicted RBP18.79■□□□□ 0.6
C9orf3-212ENST00000468164 COG3Q96JB2 828 aa18.79■□□□□ 0.6
C9orf3-212ENST00000468164 MYOM1P52179 1685 aa18.79■□□□□ 0.6
C9orf3-212ENST00000468164 ANKRD36BQ8N2N9 1353 aa18.78■□□□□ 0.6
C9orf3-212ENST00000468164 FBLN1P23142 703 aa18.76■□□□□ 0.59
C9orf3-212ENST00000468164 PTF1AQ7RTS3 328 aa18.76■□□□□ 0.59
C9orf3-212ENST00000468164 TNS2Q63HR2 1409 aa18.75■□□□□ 0.59
C9orf3-212ENST00000468164 NBPF14Q5TI25 921 aa18.75■□□□□ 0.59
C9orf3-212ENST00000468164 NHSQ6T4R5 1651 aa18.74■□□□□ 0.59
C9orf3-212ENST00000468164 AMPHP49418 695 aa18.74■□□□□ 0.59
C9orf3-212ENST00000468164 POLR3GLQ9BT43 218 aa18.74■□□□□ 0.59
C9orf3-212ENST00000468164 GGNBP2Q9H3C7 697 aa18.74■□□□□ 0.59
C9orf3-212ENST00000468164 BTAF1O14981 1849 aa18.73■□□□□ 0.59
C9orf3-212ENST00000468164 IL2RBP14784 551 aa18.73■□□□□ 0.59
C9orf3-212ENST00000468164 CDCA8Q53HL2 280 aa18.73■□□□□ 0.59
C9orf3-212ENST00000468164 CCER1Q8TC90 406 aaPredicted RBP18.73■□□□□ 0.59
C9orf3-212ENST00000468164 IP6K1Q92551 441 aa18.73■□□□□ 0.59
C9orf3-212ENST00000468164 BCL11BQ9C0K0 894 aaPredicted RBP18.73■□□□□ 0.59
C9orf3-212ENST00000468164 CLSPNQ9HAW4 1339 aa18.73■□□□□ 0.59
C9orf3-212ENST00000468164 ACSBG1Q96GR2 724 aa18.72■□□□□ 0.59
C9orf3-212ENST00000468164 TIMELESSQ9UNS1 1208 aa18.72■□□□□ 0.59
C9orf3-212ENST00000468164 MAP3K19Q56UN5 1328 aa18.72■□□□□ 0.59
C9orf3-212ENST00000468164 MAP2P11137 1827 aaKnown RBP18.7■□□□□ 0.58
C9orf3-212ENST00000468164 HOXC9P31274 260 aa18.7■□□□□ 0.58
C9orf3-212ENST00000468164 RRS1Q15050 365 aaKnown RBP18.7■□□□□ 0.58
C9orf3-212ENST00000468164 FYB1O15117 783 aa18.69■□□□□ 0.58
C9orf3-212ENST00000468164 PLSCR1O15162 318 aa18.69■□□□□ 0.58
C9orf3-212ENST00000468164 KCNQ2O43526 872 aa18.68■□□□□ 0.58
C9orf3-212ENST00000468164 DOT1LQ8TEK3 1739 aa18.68■□□□□ 0.58
C9orf3-212ENST00000468164 SHANK3Q9BYB0 1731 aa18.68■□□□□ 0.58
C9orf3-212ENST00000468164 BCL9O00512 1426 aa18.67■□□□□ 0.58
C9orf3-212ENST00000468164 NSD3Q9BZ95 1437 aa18.66■□□□□ 0.58
C9orf3-212ENST00000468164 DDX54Q8TDD1 881 aaKnown RBP18.66■□□□□ 0.58
C9orf3-212ENST00000468164 CASZ1Q86V15 1759 aa18.64■□□□□ 0.57
C9orf3-212ENST00000468164 RTL1A6NKG5 1358 aa18.64■□□□□ 0.57
C9orf3-212ENST00000468164 ANKRD26Q9UPS8 1709 aa18.63■□□□□ 0.57
C9orf3-212ENST00000468164 TXNRD1Q16881 649 aa18.63■□□□□ 0.57
C9orf3-212ENST00000468164 PROM2Q8N271 834 aa18.63■□□□□ 0.57
C9orf3-212ENST00000468164 USHBP1Q8N6Y0 703 aa18.63■□□□□ 0.57
C9orf3-212ENST00000468164 CARD14Q9BXL6 1004 aa18.63■□□□□ 0.57
C9orf3-212ENST00000468164 ANO8Q9HCE9 1232 aaPredicted RBP18.63■□□□□ 0.57
C9orf3-212ENST00000468164 SMG6Q86US8 1419 aaKnown RBP18.63■□□□□ 0.57
C9orf3-212ENST00000468164 SYTL4Q96C24 671 aaPredicted RBP18.61■□□□□ 0.57
C9orf3-212ENST00000468164 PPP1R1BQ9UD71 204 aaPredicted RBP18.61■□□□□ 0.57
C9orf3-212ENST00000468164 MEGF6O75095 1541 aa18.6■□□□□ 0.57
C9orf3-212ENST00000468164 PPM1GO15355 546 aaPredicted RBP18.6■□□□□ 0.57
C9orf3-212ENST00000468164 HSP90AB2PQ58FF8 381 aa18.6■□□□□ 0.57
C9orf3-212ENST00000468164 NBPF6Q5VWK0 638 aa18.6■□□□□ 0.57
C9orf3-212ENST00000468164 NBPF4Q96M43 638 aa18.6■□□□□ 0.57
Retrieved 100 of 20,778 RNA–protein pairs in 28.8 ms