RNA–Protein interactions for RNA: ENST00000468086.1

RBM39-226, Transcript of RNA binding motif protein 39, humanhuman

TSL 4

Gene RBM39, Length 549 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RBM39-226ENST00000468086 WDR4P57081 412 aaKnown RBP9.99□□□□□ -0.81
RBM39-226ENST00000468086 ZBTB33Q86T24 672 aa9.99□□□□□ -0.81
RBM39-226ENST00000468086 NPAS3Q8IXF0 933 aa9.99□□□□□ -0.81
RBM39-226ENST00000468086 CDV3Q9UKY7 258 aaKnown RBP9.99□□□□□ -0.81
RBM39-226ENST00000468086 NDUFB9Q9Y6M9 179 aa9.99□□□□□ -0.81
RBM39-226ENST00000468086 TIMP2P16035 220 aa9.98□□□□□ -0.81
RBM39-226ENST00000468086 NR5A1Q13285 461 aa9.98□□□□□ -0.81
RBM39-226ENST00000468086 SCARF1Q14162 830 aa9.98□□□□□ -0.81
RBM39-226ENST00000468086 ERFEQ4G0M1 354 aa9.98□□□□□ -0.81
RBM39-226ENST00000468086 MRPL14Q6P1L8 145 aaKnown RBP9.98□□□□□ -0.81
RBM39-226ENST00000468086 ARID5BQ14865 1188 aa9.97□□□□□ -0.81
RBM39-226ENST00000468086 IRF7Q92985 503 aa9.97□□□□□ -0.81
RBM39-226ENST00000468086 ZBBXA8MT70 800 aa9.95□□□□□ -0.82
RBM39-226ENST00000468086 GRM5P41594 1212 aa9.95□□□□□ -0.82
RBM39-226ENST00000468086 ADAM32Q8TC27 787 aa9.95□□□□□ -0.82
RBM39-226ENST00000468086 OCSTAMPQ9BR26 566 aa9.95□□□□□ -0.82
RBM39-226ENST00000468086 KLF16Q9BXK1 252 aaPredicted RBP9.95□□□□□ -0.82
RBM39-226ENST00000468086 CARD14Q9BXL6 1004 aa9.95□□□□□ -0.82
RBM39-226ENST00000468086 H3BM21 787 aa9.94□□□□□ -0.82
RBM39-226ENST00000468086 NR3C2P08235 984 aa9.94□□□□□ -0.82
RBM39-226ENST00000468086 VEGFBP49765 207 aa9.94□□□□□ -0.82
RBM39-226ENST00000468086 VASH1Q7L8A9 365 aaPredicted RBP9.94□□□□□ -0.82
RBM39-226ENST00000468086 PURBQ96QR8 312 aaKnown RBP9.94□□□□□ -0.82
RBM39-226ENST00000468086 GMPRP36959 345 aa9.93□□□□□ -0.82
RBM39-226ENST00000468086 MCCD1P59942 119 aaPredicted RBP9.93□□□□□ -0.82
RBM39-226ENST00000468086 ZNF592Q92610 1267 aa9.93□□□□□ -0.82
RBM39-226ENST00000468086 SLC10A4Q96EP9 437 aa9.93□□□□□ -0.82
RBM39-226ENST00000468086 ZIC2O95409 532 aaPredicted RBP9.92□□□□□ -0.82
RBM39-226ENST00000468086 ZFAND3Q9H8U3 227 aa9.92□□□□□ -0.82
RBM39-226ENST00000468086 FLIIQ13045 1269 aa9.91□□□□□ -0.82
RBM39-226ENST00000468086 MCM6Q14566 821 aa9.91□□□□□ -0.82
RBM39-226ENST00000468086 ITPKCQ96DU7 683 aa9.91□□□□□ -0.82
RBM39-226ENST00000468086 ZNF330Q9Y3S2 320 aaPredicted RBP9.91□□□□□ -0.82
RBM39-226ENST00000468086 FAM181BA6NEQ2 426 aa9.9□□□□□ -0.82
RBM39-226ENST00000468086 NR1H3Q13133 447 aa9.9□□□□□ -0.82
RBM39-226ENST00000468086 NBPF20Q3BBV1 942 aa9.9□□□□□ -0.82
RBM39-226ENST00000468086 DZIP3Q86Y13 1208 aaKnown RBP9.9□□□□□ -0.82
RBM39-226ENST00000468086 FBXO45P0C2W1 286 aa9.89□□□□□ -0.83
RBM39-226ENST00000468086 FSHRP23945 695 aa9.89□□□□□ -0.83
RBM39-226ENST00000468086 KCTD15Q96SI1 283 aaPredicted RBP9.89□□□□□ -0.83
RBM39-226ENST00000468086 ERBB4Q15303 1308 aa9.88□□□□□ -0.83
RBM39-226ENST00000468086 SOBPA7XYQ1 873 aa9.88□□□□□ -0.83
RBM39-226ENST00000468086 GPR37L1O60883 481 aa9.88□□□□□ -0.83
RBM39-226ENST00000468086 DHX9Q08211 1270 aaKnown RBP9.88□□□□□ -0.83
RBM39-226ENST00000468086 CCDC125Q86Z20 511 aa9.87□□□□□ -0.83
RBM39-226ENST00000468086 CCDC116Q8IYX3 515 aa9.87□□□□□ -0.83
RBM39-226ENST00000468086 ZSCAN1Q8NBB4 408 aa9.87□□□□□ -0.83
RBM39-226ENST00000468086 TRIM52Q96A61 297 aa9.87□□□□□ -0.83
RBM39-226ENST00000468086 TBC1D2BQ9UPU7 963 aa9.87□□□□□ -0.83
RBM39-226ENST00000468086 EMILIN1Q9Y6C2 1016 aa9.87□□□□□ -0.83
RBM39-226ENST00000468086 MAN1A2O60476 641 aa9.86□□□□□ -0.83
RBM39-226ENST00000468086 UPP2O95045 317 aa9.86□□□□□ -0.83
RBM39-226ENST00000468086 C6orf118Q5T5N4 469 aa9.86□□□□□ -0.83
RBM39-226ENST00000468086 SEPT12Q8IYM1 358 aa9.86□□□□□ -0.83
RBM39-226ENST00000468086 BMP2P12643 396 aa9.84□□□□□ -0.83
RBM39-226ENST00000468086 PGPEP1Q9NXJ5 209 aa9.84□□□□□ -0.83
RBM39-226ENST00000468086 PCDHB9Q9Y5E1 797 aa9.84□□□□□ -0.83
RBM39-226ENST00000468086 ESPNB1AK53 854 aa9.83□□□□□ -0.84
RBM39-226ENST00000468086 WASHC4Q2M389 1173 aa9.83□□□□□ -0.84
RBM39-226ENST00000468086 LINC00528Q8N1L1 170 aa9.83□□□□□ -0.84
RBM39-226ENST00000468086 MEIOBQ8N635 442 aa9.83□□□□□ -0.84
RBM39-226ENST00000468086 GDPD2Q9HCC8 539 aa9.83□□□□□ -0.84
RBM39-226ENST00000468086 LORP23490 312 aaPredicted RBP9.82□□□□□ -0.84
RBM39-226ENST00000468086 IRF5Q13568 498 aa9.82□□□□□ -0.84
RBM39-226ENST00000468086 INTS6LQ5JSJ4 861 aaKnown RBP9.82□□□□□ -0.84
RBM39-226ENST00000468086 PPP1R26Q5T8A7 1209 aaPredicted RBP9.82□□□□□ -0.84
RBM39-226ENST00000468086 EIF4G2P78344 907 aaKnown RBP eCLIP9.81□□□□□ -0.84
RBM39-226ENST00000468086 RNF20Q5VTR2 975 aa9.81□□□□□ -0.84
RBM39-226ENST00000468086 RAD21O60216 631 aa9.8□□□□□ -0.84
RBM39-226ENST00000468086 VSIG8P0DPA2 414 aa9.8□□□□□ -0.84
RBM39-226ENST00000468086 WWC1Q8IX03 1113 aa9.8□□□□□ -0.84
RBM39-226ENST00000468086 COG6Q9Y2V7 657 aa9.8□□□□□ -0.84
RBM39-226ENST00000468086 ABL2P42684 1182 aa9.79□□□□□ -0.84
RBM39-226ENST00000468086 UBTFP17480 764 aaKnown RBP9.78□□□□□ -0.84
RBM39-226ENST00000468086 TSEN34Q9BSV6 310 aaKnown RBP9.78□□□□□ -0.84
RBM39-226ENST00000468086 GIGYF1O75420 1035 aaPredicted RBP9.77□□□□□ -0.85
RBM39-226ENST00000468086 SOX11P35716 441 aa9.77□□□□□ -0.85
RBM39-226ENST00000468086 Q6ZVU0 165 aa9.77□□□□□ -0.85
RBM39-226ENST00000468086 SOS2Q07890 1332 aaPredicted RBP9.77□□□□□ -0.85
RBM39-226ENST00000468086 PPFIA3O75145 1194 aa9.76□□□□□ -0.85
RBM39-226ENST00000468086 ERVH48-1M5A8F1 160 aa9.75□□□□□ -0.85
RBM39-226ENST00000468086 CEP126Q9P2H0 1117 aa9.75□□□□□ -0.85
RBM39-226ENST00000468086 DNMT3LQ9UJW3 386 aa9.75□□□□□ -0.85
RBM39-226ENST00000468086 VAC14Q08AM6 782 aa9.73□□□□□ -0.85
RBM39-226ENST00000468086 CBLBQ13191 982 aa9.73□□□□□ -0.85
RBM39-226ENST00000468086 TTLL8A6PVC2 850 aa9.72□□□□□ -0.85
RBM39-226ENST00000468086 RAB15P59190 212 aa9.72□□□□□ -0.85
RBM39-226ENST00000468086 ZNF800Q2TB10 664 aaPredicted RBP eCLIP9.72□□□□□ -0.85
RBM39-226ENST00000468086 POM121Q96HA1 1249 aa9.72□□□□□ -0.85
RBM39-226ENST00000468086 ZNF784Q8NCA9 323 aaPredicted RBP9.71□□□□□ -0.86
RBM39-226ENST00000468086 TMPRSS4Q9NRS4 437 aa9.71□□□□□ -0.86
RBM39-226ENST00000468086 LILRA1O75019 489 aa9.7□□□□□ -0.86
RBM39-226ENST00000468086 SEMA3FQ13275 785 aa9.7□□□□□ -0.86
RBM39-226ENST00000468086 FIGNL2A6NMB9 653 aa9.68□□□□□ -0.86
RBM39-226ENST00000468086 ERVK-9P63128 1117 aa9.68□□□□□ -0.86
RBM39-226ENST00000468086 PTSQ03393 145 aa9.68□□□□□ -0.86
RBM39-226ENST00000468086 SLFNL1Q499Z3 407 aa9.68□□□□□ -0.86
RBM39-226ENST00000468086 CC2D2BQ6DHV5 1058 aa9.68□□□□□ -0.86
RBM39-226ENST00000468086 PHTF2Q8N3S3 785 aa9.68□□□□□ -0.86
RBM39-226ENST00000468086 SPINT1O43278 529 aa9.67□□□□□ -0.86
Retrieved 100 of 20,778 RNA–protein pairs in 13.6 ms