RNA–Protein interactions for RNA: ENST00000467387.1

SPTA1-204, Transcript of spectrin alpha, erythrocytic 1, humanhuman

TSL 5

Gene SPTA1, Length 465 nt, Biotype protein coding, Subcellular localisation Cytosol, Dendrite .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPTA1-204ENST00000467387 ADGRF5Q8IZF2 1346 aa11.09□□□□□ -0.63
SPTA1-204ENST00000467387 GLI3P10071 1580 aa11.09□□□□□ -0.63
SPTA1-204ENST00000467387 ANKRD30BQ9BXX2 1392 aa11.09□□□□□ -0.63
SPTA1-204ENST00000467387 PLEKHH1Q9ULM0 1364 aa11.09□□□□□ -0.63
SPTA1-204ENST00000467387 C3orf67Q6ZVT6 689 aa11.09□□□□□ -0.63
SPTA1-204ENST00000467387 PCGF6Q9BYE7 350 aa11.09□□□□□ -0.63
SPTA1-204ENST00000467387 TSHZ2Q9NRE2 1034 aa11.09□□□□□ -0.63
SPTA1-204ENST00000467387 FMN2Q9NZ56 1722 aa11.09□□□□□ -0.63
SPTA1-204ENST00000467387 TNS3Q68CZ2 1445 aa11.09□□□□□ -0.63
SPTA1-204ENST00000467387 MAMSTRQ6ZN01 415 aa11.08□□□□□ -0.64
SPTA1-204ENST00000467387 KNDC1Q76NI1 1749 aa11.08□□□□□ -0.64
SPTA1-204ENST00000467387 SLIT2O94813 1529 aa11.08□□□□□ -0.64
SPTA1-204ENST00000467387 SPATA31A3Q5VYP0 1347 aa11.08□□□□□ -0.64
SPTA1-204ENST00000467387 TMEM132EQ6IEE7 984 aa11.07□□□□□ -0.64
SPTA1-204ENST00000467387 KRT28Q7Z3Y7 464 aa11.07□□□□□ -0.64
SPTA1-204ENST00000467387 SCUBE2Q9NQ36 999 aa11.07□□□□□ -0.64
SPTA1-204ENST00000467387 YTHDC2Q9H6S0 1430 aaKnown RBP11.07□□□□□ -0.64
SPTA1-204ENST00000467387 PLCH1Q4KWH8 1693 aa11.06□□□□□ -0.64
SPTA1-204ENST00000467387 PSME1Q06323 249 aa11.06□□□□□ -0.64
SPTA1-204ENST00000467387 DEFB132Q7Z7B7 95 aa11.06□□□□□ -0.64
SPTA1-204ENST00000467387 SEPT12Q8IYM1 358 aa11.06□□□□□ -0.64
SPTA1-204ENST00000467387 OTUD5Q96G74 571 aa11.06□□□□□ -0.64
SPTA1-204ENST00000467387 EIF2AK3Q9NZJ5 1116 aaKnown RBP11.06□□□□□ -0.64
SPTA1-204ENST00000467387 PIK3C2GO75747 1445 aa11.06□□□□□ -0.64
SPTA1-204ENST00000467387 IFT172Q9UG01 1749 aa11.06□□□□□ -0.64
SPTA1-204ENST00000467387 ARHGEF10O15013 1369 aa11.05□□□□□ -0.64
SPTA1-204ENST00000467387 ABCC11Q96J66 1382 aa11.05□□□□□ -0.64
SPTA1-204ENST00000467387 SAFB2Q14151 953 aaKnown RBP eCLIP11.05□□□□□ -0.64
SPTA1-204ENST00000467387 TMEM92Q6UXU6 159 aa11.05□□□□□ -0.64
SPTA1-204ENST00000467387 SPATA31E1Q6ZUB1 1445 aa11.05□□□□□ -0.64
SPTA1-204ENST00000467387 CABLES1Q8TDN4 633 aa11.05□□□□□ -0.64
SPTA1-204ENST00000467387 TRIM26Q12899 539 aaPredicted RBP11.04□□□□□ -0.64
SPTA1-204ENST00000467387 VPS72Q15906 364 aa11.04□□□□□ -0.64
SPTA1-204ENST00000467387 KRT27Q7Z3Y8 459 aa11.03□□□□□ -0.64
SPTA1-204ENST00000467387 CRISPLD2Q9H0B8 497 aa11.03□□□□□ -0.64
SPTA1-204ENST00000467387 BRWD3Q6RI45 1802 aa11.02□□□□□ -0.64
SPTA1-204ENST00000467387 ABCA3Q99758 1704 aa11.02□□□□□ -0.65
SPTA1-204ENST00000467387 NWD2Q9ULI1 1742 aa11.02□□□□□ -0.65
SPTA1-204ENST00000467387 PSDA5PKW4 1024 aaPredicted RBP11.02□□□□□ -0.65
SPTA1-204ENST00000467387 KIF3CO14782 793 aa11.02□□□□□ -0.65
SPTA1-204ENST00000467387 BAG6P46379 1132 aa11.02□□□□□ -0.65
SPTA1-204ENST00000467387 POGKQ9P215 609 aa11.02□□□□□ -0.65
SPTA1-204ENST00000467387 SBNO1A3KN83 1393 aa11.02□□□□□ -0.65
SPTA1-204ENST00000467387 LRP5O75197 1615 aa11.02□□□□□ -0.65
SPTA1-204ENST00000467387 DHX57Q6P158 1386 aaKnown RBP11.02□□□□□ -0.65
SPTA1-204ENST00000467387 NRXN1Q9ULB1 1477 aa11.01□□□□□ -0.65
SPTA1-204ENST00000467387 PRAM1Q96QH2 718 aa11.01□□□□□ -0.65
SPTA1-204ENST00000467387 FAM98CQ17RN3 349 aaKnown RBP11□□□□□ -0.65
SPTA1-204ENST00000467387 MPHOSPH9Q99550 1183 aa11□□□□□ -0.65
SPTA1-204ENST00000467387 GPRASP1Q5JY77 1395 aa11□□□□□ -0.65
SPTA1-204ENST00000467387 C2orf72A6NCS6 295 aa10.99□□□□□ -0.65
SPTA1-204ENST00000467387 PMFBP1Q8TBY8 1022 aa10.99□□□□□ -0.65
SPTA1-204ENST00000467387 GPHNQ9NQX3 736 aaPredicted RBP10.99□□□□□ -0.65
SPTA1-204ENST00000467387 EIF3AQ14152 1382 aaKnown RBP10.99□□□□□ -0.65
SPTA1-204ENST00000467387 ANKARQ7Z5J8 1434 aa10.99□□□□□ -0.65
SPTA1-204ENST00000467387 RGPD8O14715 1765 aaPredicted RBP10.98□□□□□ -0.65
SPTA1-204ENST00000467387 CFAP70Q5T0N1 1121 aa10.98□□□□□ -0.65
SPTA1-204ENST00000467387 BTG4Q9NY30 223 aa10.98□□□□□ -0.65
SPTA1-204ENST00000467387 SLAIN1Q8ND83 568 aa10.97□□□□□ -0.65
SPTA1-204ENST00000467387 TMC2Q8TDI7 906 aa10.97□□□□□ -0.65
SPTA1-204ENST00000467387 SIRT1Q96EB6 747 aa10.97□□□□□ -0.65
SPTA1-204ENST00000467387 HIRIP3Q9BW71 556 aaPredicted RBP10.97□□□□□ -0.65
SPTA1-204ENST00000467387 C14orf93Q9H972 538 aaKnown RBP10.97□□□□□ -0.65
SPTA1-204ENST00000467387 ADGRB2O60241 1585 aa10.97□□□□□ -0.65
SPTA1-204ENST00000467387 NRAPQ86VF7 1730 aa10.97□□□□□ -0.65
SPTA1-204ENST00000467387 COL14A1Q05707 1796 aaKnown RBP10.96□□□□□ -0.65
SPTA1-204ENST00000467387 FAM83GA6ND36 823 aa10.96□□□□□ -0.65
SPTA1-204ENST00000467387 PDE4AP27815 886 aa10.96□□□□□ -0.65
SPTA1-204ENST00000467387 PRDM11Q9NQV5 511 aa10.96□□□□□ -0.65
SPTA1-204ENST00000467387 RGPD1P0DJD0 1748 aa10.95□□□□□ -0.66
SPTA1-204ENST00000467387 DLC1Q96QB1 1528 aa10.95□□□□□ -0.66
SPTA1-204ENST00000467387 MINK1Q8N4C8 1332 aaPredicted RBP10.95□□□□□ -0.66
SPTA1-204ENST00000467387 ZEB1P37275 1124 aaPredicted RBP10.95□□□□□ -0.66
SPTA1-204ENST00000467387 MFSD10Q14728 455 aa10.95□□□□□ -0.66
SPTA1-204ENST00000467387 ACIN1Q9UKV3 1341 aaKnown RBP10.94□□□□□ -0.66
SPTA1-204ENST00000467387 ONECUT3O60422 494 aaPredicted RBP10.94□□□□□ -0.66
SPTA1-204ENST00000467387 EN1Q05925 392 aaPredicted RBP10.94□□□□□ -0.66
SPTA1-204ENST00000467387 R3HDM1Q15032 1099 aaKnown RBP10.94□□□□□ -0.66
SPTA1-204ENST00000467387 FAM182BQ5T319 152 aa10.94□□□□□ -0.66
SPTA1-204ENST00000467387 NGDNQ8NEJ9 315 aaKnown RBP10.94□□□□□ -0.66
SPTA1-204ENST00000467387 TRAK1Q9UPV9 953 aa10.94□□□□□ -0.66
SPTA1-204ENST00000467387 TULP4Q9NRJ4 1543 aa10.94□□□□□ -0.66
SPTA1-204ENST00000467387 TRPM3Q9HCF6 1732 aaPredicted RBP10.93□□□□□ -0.66
SPTA1-204ENST00000467387 FOXK1P85037 733 aa10.93□□□□□ -0.66
SPTA1-204ENST00000467387 LARP6Q9BRS8 491 aaKnown RBP10.93□□□□□ -0.66
SPTA1-204ENST00000467387 SPATA31A5Q5VU36 1347 aa10.92□□□□□ -0.66
SPTA1-204ENST00000467387 SPATA31A7Q8IWB4 1347 aa10.92□□□□□ -0.66
SPTA1-204ENST00000467387 DSG2Q14126 1118 aa10.92□□□□□ -0.66
SPTA1-204ENST00000467387 STRN4Q9NRL3 753 aa10.92□□□□□ -0.66
SPTA1-204ENST00000467387 ALS2Q96Q42 1657 aa10.92□□□□□ -0.66
SPTA1-204ENST00000467387 SLC24A1O60721 1099 aa10.91□□□□□ -0.66
SPTA1-204ENST00000467387 DDX27Q96GQ7 796 aaKnown RBP10.91□□□□□ -0.66
SPTA1-204ENST00000467387 KDM2AQ9Y2K7 1162 aa10.91□□□□□ -0.66
SPTA1-204ENST00000467387 THSD7AQ9UPZ6 1657 aa10.91□□□□□ -0.66
SPTA1-204ENST00000467387 KIAA0232Q92628 1395 aa10.9□□□□□ -0.66
SPTA1-204ENST00000467387 ADGRB1O14514 1584 aa10.9□□□□□ -0.66
SPTA1-204ENST00000467387 PRR36Q9H6K5 1346 aa10.9□□□□□ -0.66
SPTA1-204ENST00000467387 PPP1R15BQ5SWA1 713 aa10.9□□□□□ -0.66
SPTA1-204ENST00000467387 VSIG10Q8N0Z9 540 aa10.9□□□□□ -0.66
SPTA1-204ENST00000467387 USP35Q9P2H5 1018 aa10.9□□□□□ -0.66
Retrieved 100 of 20,778 RNA–protein pairs in 66.1 ms