RNA–Protein interactions for RNA: ENST00000466453.1

APP-214, Transcript of amyloid beta precursor protein, humanhuman

TSL 3

Gene APP, Length 374 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
APP-214ENST00000466453 GPRASP1Q5JY77 1395 aa12.17□□□□□ -0.46
APP-214ENST00000466453 TUBGCP6Q96RT7 1819 aa12.16□□□□□ -0.46
APP-214ENST00000466453 DDB1Q16531 1140 aa12.16□□□□□ -0.46
APP-214ENST00000466453 KANK4Q5T7N3 995 aaPredicted RBP12.16□□□□□ -0.46
APP-214ENST00000466453 WNK3Q9BYP7 1800 aa12.16□□□□□ -0.46
APP-214ENST00000466453 CICQ96RK0 1608 aaPredicted RBP12.15□□□□□ -0.46
APP-214ENST00000466453 USP19O94966 1318 aa12.15□□□□□ -0.46
APP-214ENST00000466453 ACIN1Q9UKV3 1341 aaKnown RBP12.15□□□□□ -0.46
APP-214ENST00000466453 STK26Q9P289 416 aa12.15□□□□□ -0.46
APP-214ENST00000466453 ZC3H6P61129 1189 aaKnown RBP12.14□□□□□ -0.47
APP-214ENST00000466453 MARCH10Q8NA82 808 aaPredicted RBP12.14□□□□□ -0.47
APP-214ENST00000466453 NMRK2Q9NPI5 230 aa12.14□□□□□ -0.47
APP-214ENST00000466453 PNPLA7Q6ZV29 1317 aa12.13□□□□□ -0.47
APP-214ENST00000466453 NHSQ6T4R5 1651 aa12.13□□□□□ -0.47
APP-214ENST00000466453 RGS19P49795 217 aa12.13□□□□□ -0.47
APP-214ENST00000466453 NUP155O75694 1391 aa12.13□□□□□ -0.47
APP-214ENST00000466453 COL5A2P05997 1499 aaPredicted RBP12.13□□□□□ -0.47
APP-214ENST00000466453 CRB1P82279 1406 aa12.12□□□□□ -0.47
APP-214ENST00000466453 AKT1S1Q96B36 256 aa12.12□□□□□ -0.47
APP-214ENST00000466453 PRDM10Q9NQV6 1147 aa12.12□□□□□ -0.47
APP-214ENST00000466453 BRD4O60885 1362 aaPredicted RBP12.12□□□□□ -0.47
APP-214ENST00000466453 RPGRIP1LQ68CZ1 1315 aa12.11□□□□□ -0.47
APP-214ENST00000466453 CPDO75976 1380 aa12.11□□□□□ -0.47
APP-214ENST00000466453 CD2APQ9Y5K6 639 aa12.11□□□□□ -0.47
APP-214ENST00000466453 ANKRD30BQ9BXX2 1392 aa12.1□□□□□ -0.47
APP-214ENST00000466453 C16orf71Q8IYS4 520 aaPredicted RBP12.1□□□□□ -0.47
APP-214ENST00000466453 ABHD8Q96I13 439 aa12.1□□□□□ -0.47
APP-214ENST00000466453 VPS8Q8N3P4 1428 aa12.1□□□□□ -0.47
APP-214ENST00000466453 C10orf71Q711Q0 1435 aa12.09□□□□□ -0.47
APP-214ENST00000466453 BTAF1O14981 1849 aa12.09□□□□□ -0.47
APP-214ENST00000466453 PAK3O75914 559 aaPredicted RBP12.08□□□□□ -0.48
APP-214ENST00000466453 SIRT1Q96EB6 747 aa12.08□□□□□ -0.48
APP-214ENST00000466453 LRRC4BQ9NT99 713 aa12.08□□□□□ -0.48
APP-214ENST00000466453 YTHDC2Q9H6S0 1430 aaKnown RBP12.07□□□□□ -0.48
APP-214ENST00000466453 CUL9Q8IWT3 2517 aa12.07□□□□□ -0.48
APP-214ENST00000466453 KAT6BQ8WYB5 2073 aa12.06□□□□□ -0.48
APP-214ENST00000466453 FOXN1O15353 648 aa12.06□□□□□ -0.48
APP-214ENST00000466453 CDCA7Q9BWT1 371 aaPredicted RBP12.05□□□□□ -0.48
APP-214ENST00000466453 TRPM1Q7Z4N2 1603 aa12.04□□□□□ -0.48
APP-214ENST00000466453 IGSF1Q8N6C5 1336 aa12.04□□□□□ -0.48
APP-214ENST00000466453 PXDNLA1KZ92 1463 aa12.03□□□□□ -0.48
APP-214ENST00000466453 TMEM132EQ6IEE7 984 aa12.03□□□□□ -0.48
APP-214ENST00000466453 SMC1BQ8NDV3 1235 aa12.03□□□□□ -0.48
APP-214ENST00000466453 TFCP2L1Q9NZI6 479 aa12.03□□□□□ -0.48
APP-214ENST00000466453 ADGRF5Q8IZF2 1346 aa12.02□□□□□ -0.49
APP-214ENST00000466453 PRR36Q9H6K5 1346 aa12.02□□□□□ -0.49
APP-214ENST00000466453 PIK3C2AO00443 1686 aa12.01□□□□□ -0.49
APP-214ENST00000466453 TNRC6CQ9HCJ0 1690 aaKnown RBP12.01□□□□□ -0.49
APP-214ENST00000466453 CTCFP49711 727 aaPredicted RBP12.01□□□□□ -0.49
APP-214ENST00000466453 SLC27A3Q5K4L6 730 aa12.01□□□□□ -0.49
APP-214ENST00000466453 NGDNQ8NEJ9 315 aaKnown RBP12.01□□□□□ -0.49
APP-214ENST00000466453 EIF3AQ14152 1382 aaKnown RBP12.01□□□□□ -0.49
APP-214ENST00000466453 USP6P35125 1406 aa12.01□□□□□ -0.49
APP-214ENST00000466453 HIRIP3Q9BW71 556 aaPredicted RBP12□□□□□ -0.49
APP-214ENST00000466453 PLEKHG2Q9H7P9 1386 aa12□□□□□ -0.49
APP-214ENST00000466453 A0A0C4DFX4 3053 aa12□□□□□ -0.49
APP-214ENST00000466453 NUTM2GQ5VZR2 741 aa11.99□□□□□ -0.49
APP-214ENST00000466453 ROCK1Q13464 1354 aa11.99□□□□□ -0.49
APP-214ENST00000466453 PKD1L3Q7Z443 1732 aa11.99□□□□□ -0.49
APP-214ENST00000466453 PIK3C2GO75747 1445 aa11.98□□□□□ -0.49
APP-214ENST00000466453 MSL1Q68DK7 614 aa11.98□□□□□ -0.49
APP-214ENST00000466453 TOM1L2Q6ZVM7 507 aa11.98□□□□□ -0.49
APP-214ENST00000466453 ITSN1Q15811 1721 aa11.97□□□□□ -0.49
APP-214ENST00000466453 ABCC6O95255 1503 aa11.97□□□□□ -0.49
APP-214ENST00000466453 KCPQ6ZWJ8 1503 aa11.97□□□□□ -0.49
APP-214ENST00000466453 CCDC85CA6NKD9 419 aa11.97□□□□□ -0.49
APP-214ENST00000466453 SAFB2Q14151 953 aaKnown RBP eCLIP11.97□□□□□ -0.49
APP-214ENST00000466453 ACSBG1Q96GR2 724 aa11.97□□□□□ -0.49
APP-214ENST00000466453 KDM2BQ8NHM5 1336 aa11.96□□□□□ -0.49
APP-214ENST00000466453 EXOC5O00471 708 aa11.96□□□□□ -0.49
APP-214ENST00000466453 PRAM1Q96QH2 718 aa11.96□□□□□ -0.49
APP-214ENST00000466453 WDR17Q8IZU2 1322 aa11.95□□□□□ -0.5
APP-214ENST00000466453 COL23A1Q86Y22 540 aaPredicted RBP11.95□□□□□ -0.5
APP-214ENST00000466453 AIDAQ96BJ3 306 aa11.95□□□□□ -0.5
APP-214ENST00000466453 COL18A1P39060 1754 aa11.95□□□□□ -0.5
APP-214ENST00000466453 MSH5O43196 834 aa11.94□□□□□ -0.5
APP-214ENST00000466453 LBX1P52954 281 aa11.94□□□□□ -0.5
APP-214ENST00000466453 LY75O60449 1722 aa11.94□□□□□ -0.5
APP-214ENST00000466453 QRICH2Q9H0J4 1663 aa11.94□□□□□ -0.5
APP-214ENST00000466453 GCP02774 474 aa11.93□□□□□ -0.5
APP-214ENST00000466453 RRAGCQ9HB90 399 aa11.93□□□□□ -0.5
APP-214ENST00000466453 FAM50AQ14320 339 aaKnown RBP11.92□□□□□ -0.5
APP-214ENST00000466453 CARD10Q9BWT7 1032 aa11.91□□□□□ -0.5
APP-214ENST00000466453 MKRN1Q9UHC7 482 aaKnown RBP11.91□□□□□ -0.5
APP-214ENST00000466453 KCNQ4P56696 695 aa11.9□□□□□ -0.5
APP-214ENST00000466453 PRPF38BQ5VTL8 546 aaKnown RBP11.9□□□□□ -0.5
APP-214ENST00000466453 C9orf131Q5VYM1 1079 aa11.9□□□□□ -0.5
APP-214ENST00000466453 KIAA1551Q9HCM1 1747 aa11.9□□□□□ -0.5
APP-214ENST00000466453 VIRMAQ69YN4 1812 aaKnown RBP11.89□□□□□ -0.51
APP-214ENST00000466453 KIF13BQ9NQT8 1826 aa11.89□□□□□ -0.51
APP-214ENST00000466453 ABTB2Q8N961 1025 aa11.89□□□□□ -0.51
APP-214ENST00000466453 CREBZFQ9NS37 354 aa11.89□□□□□ -0.51
APP-214ENST00000466453 POGKQ9P215 609 aa11.89□□□□□ -0.51
APP-214ENST00000466453 USP54Q70EL1 1684 aa11.89□□□□□ -0.51
APP-214ENST00000466453 POLR3AO14802 1390 aaPredicted RBP11.89□□□□□ -0.51
APP-214ENST00000466453 CNTNAP1P78357 1384 aa11.89□□□□□ -0.51
APP-214ENST00000466453 PPIP5K1Q6PFW1 1433 aa11.88□□□□□ -0.51
APP-214ENST00000466453 WASLO00401 505 aaPredicted RBP11.88□□□□□ -0.51
APP-214ENST00000466453 HSPA8P11142 646 aaKnown RBP11.88□□□□□ -0.51
APP-214ENST00000466453 ARHGAP27Q6ZUM4 889 aa11.88□□□□□ -0.51
Retrieved 100 of 20,778 RNA–protein pairs in 49.2 ms