RNA–Protein interactions for RNA: ENST00000466411.1

CLDN4-204, Transcript of claudin 4, humanhuman

TSL 4

Gene CLDN4, Length 593 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLDN4-204ENST00000466411 YBX3P16989 372 aaKnown RBP eCLIP10□□□□□ -0.81
CLDN4-204ENST00000466411 JMYQ8N9B5 988 aa10□□□□□ -0.81
CLDN4-204ENST00000466411 KIF3CO14782 793 aa9.99□□□□□ -0.81
CLDN4-204ENST00000466411 APLP1P51693 650 aa9.99□□□□□ -0.81
CLDN4-204ENST00000466411 BCL11BQ9C0K0 894 aaPredicted RBP9.99□□□□□ -0.81
CLDN4-204ENST00000466411 GPBP1L1Q9HC44 474 aaPredicted RBP9.99□□□□□ -0.81
CLDN4-204ENST00000466411 ABCC11Q96J66 1382 aa9.99□□□□□ -0.81
CLDN4-204ENST00000466411 PARP4Q9UKK3 1724 aaKnown RBP9.99□□□□□ -0.81
CLDN4-204ENST00000466411 C11orf95C9JLR9 678 aaPredicted RBP9.98□□□□□ -0.81
CLDN4-204ENST00000466411 PRDM11Q9NQV5 511 aa9.98□□□□□ -0.81
CLDN4-204ENST00000466411 KIAA1210Q9ULL0 1709 aa9.97□□□□□ -0.81
CLDN4-204ENST00000466411 TXNRD1Q16881 649 aa9.97□□□□□ -0.81
CLDN4-204ENST00000466411 NLGN2Q8NFZ4 835 aa9.97□□□□□ -0.81
CLDN4-204ENST00000466411 AKT1S1Q96B36 256 aa9.97□□□□□ -0.81
CLDN4-204ENST00000466411 USP35Q9P2H5 1018 aa9.97□□□□□ -0.81
CLDN4-204ENST00000466411 CHRNA2Q15822 529 aa9.96□□□□□ -0.82
CLDN4-204ENST00000466411 PLCD3Q8N3E9 789 aa9.96□□□□□ -0.82
CLDN4-204ENST00000466411 TCP11L2Q8N4U5 519 aa9.96□□□□□ -0.82
CLDN4-204ENST00000466411 STRN4Q9NRL3 753 aa9.96□□□□□ -0.82
CLDN4-204ENST00000466411 STK32BQ9NY57 414 aa9.96□□□□□ -0.82
CLDN4-204ENST00000466411 TIMELESSQ9UNS1 1208 aa9.96□□□□□ -0.82
CLDN4-204ENST00000466411 KIAA0232Q92628 1395 aa9.96□□□□□ -0.82
CLDN4-204ENST00000466411 SSH2Q76I76 1423 aa9.96□□□□□ -0.82
CLDN4-204ENST00000466411 GRIN3BO60391 1043 aa9.95□□□□□ -0.82
CLDN4-204ENST00000466411 LARP1Q6PKG0 1096 aaKnown RBP9.95□□□□□ -0.82
CLDN4-204ENST00000466411 AATKQ6ZMQ8 1374 aa9.95□□□□□ -0.82
CLDN4-204ENST00000466411 OVOS2A0A0G2JMS6 1433 aa9.95□□□□□ -0.82
CLDN4-204ENST00000466411 OVOS2A0A0J9YW53 1432 aa9.95□□□□□ -0.82
CLDN4-204ENST00000466411 OVOS2Q6IE36 1432 aa9.95□□□□□ -0.82
CLDN4-204ENST00000466411 ATP7BP35670 1465 aa9.95□□□□□ -0.82
CLDN4-204ENST00000466411 KNDC1Q76NI1 1749 aa9.95□□□□□ -0.82
CLDN4-204ENST00000466411 BCL9O00512 1426 aa9.94□□□□□ -0.82
CLDN4-204ENST00000466411 KLHL34Q8N239 644 aa9.94□□□□□ -0.82
CLDN4-204ENST00000466411 PMFBP1Q8TBY8 1022 aa9.94□□□□□ -0.82
CLDN4-204ENST00000466411 STK26Q9P289 416 aa9.94□□□□□ -0.82
CLDN4-204ENST00000466411 THRAP3Q9Y2W1 955 aaKnown RBP9.94□□□□□ -0.82
CLDN4-204ENST00000466411 PAPPAQ13219 1627 aa9.93□□□□□ -0.82
CLDN4-204ENST00000466411 PIK3C2GO75747 1445 aa9.93□□□□□ -0.82
CLDN4-204ENST00000466411 TONSLQ96HA7 1378 aa9.93□□□□□ -0.82
CLDN4-204ENST00000466411 MIER1Q8N108 512 aa9.93□□□□□ -0.82
CLDN4-204ENST00000466411 KLRG1Q96E93 195 aa9.93□□□□□ -0.82
CLDN4-204ENST00000466411 SIRT1Q96EB6 747 aa9.93□□□□□ -0.82
CLDN4-204ENST00000466411 PELP1Q8IZL8 1130 aaKnown RBP9.92□□□□□ -0.82
CLDN4-204ENST00000466411 SPOCK2Q92563 424 aa9.92□□□□□ -0.82
CLDN4-204ENST00000466411 WDR90Q96KV7 1748 aa9.92□□□□□ -0.82
CLDN4-204ENST00000466411 LMO7Q8WWI1 1683 aa9.92□□□□□ -0.82
CLDN4-204ENST00000466411 PHRF1Q9P1Y6 1649 aaKnown RBP9.92□□□□□ -0.82
CLDN4-204ENST00000466411 RGL3Q3MIN7 710 aa9.91□□□□□ -0.82
CLDN4-204ENST00000466411 SPDYE1Q8NFV5 336 aaPredicted RBP9.91□□□□□ -0.82
CLDN4-204ENST00000466411 CCER1Q8TC90 406 aaPredicted RBP9.91□□□□□ -0.82
CLDN4-204ENST00000466411 ZNF526Q8TF50 670 aaPredicted RBP9.91□□□□□ -0.82
CLDN4-204ENST00000466411 ADGRF5Q8IZF2 1346 aa9.9□□□□□ -0.82
CLDN4-204ENST00000466411 TMEM132EQ6IEE7 984 aa9.9□□□□□ -0.82
CLDN4-204ENST00000466411 REM2Q8IYK8 340 aaPredicted RBP9.9□□□□□ -0.82
CLDN4-204ENST00000466411 MARCH10Q8NA82 808 aaPredicted RBP9.9□□□□□ -0.82
CLDN4-204ENST00000466411 WWC3Q9ULE0 1092 aa9.9□□□□□ -0.82
CLDN4-204ENST00000466411 LRRC37A3O60309 1634 aa9.89□□□□□ -0.83
CLDN4-204ENST00000466411 ZC3H6P61129 1189 aaKnown RBP9.89□□□□□ -0.83
CLDN4-204ENST00000466411 HTRA3P83110 453 aa9.89□□□□□ -0.83
CLDN4-204ENST00000466411 ZNF827Q17R98 1081 aa9.89□□□□□ -0.83
CLDN4-204ENST00000466411 ANKARQ7Z5J8 1434 aa9.89□□□□□ -0.83
CLDN4-204ENST00000466411 TOMM70O94826 608 aa9.88□□□□□ -0.83
CLDN4-204ENST00000466411 EVA1CP58658 441 aa9.88□□□□□ -0.83
CLDN4-204ENST00000466411 DCAF11Q8TEB1 546 aa9.88□□□□□ -0.83
CLDN4-204ENST00000466411 SLC16A10Q8TF71 515 aa9.88□□□□□ -0.83
CLDN4-204ENST00000466411 QSER1Q2KHR3 1735 aa9.87□□□□□ -0.83
CLDN4-204ENST00000466411 PRR36Q9H6K5 1346 aa9.87□□□□□ -0.83
CLDN4-204ENST00000466411 TRPM1Q7Z4N2 1603 aa9.87□□□□□ -0.83
CLDN4-204ENST00000466411 YTHDC2Q9H6S0 1430 aaKnown RBP9.87□□□□□ -0.83
CLDN4-204ENST00000466411 ARHGEF28Q8N1W1 1705 aaKnown RBP9.87□□□□□ -0.83
CLDN4-204ENST00000466411 GPRASP1Q5JY77 1395 aa9.87□□□□□ -0.83
CLDN4-204ENST00000466411 LRRC4BQ9NT99 713 aa9.86□□□□□ -0.83
CLDN4-204ENST00000466411 CPDO75976 1380 aa9.86□□□□□ -0.83
CLDN4-204ENST00000466411 NEUROD1Q13562 356 aa9.85□□□□□ -0.83
CLDN4-204ENST00000466411 C14orf93Q9H972 538 aaKnown RBP9.85□□□□□ -0.83
CLDN4-204ENST00000466411 TOPAZ1Q8N9V7 1692 aa9.85□□□□□ -0.83
CLDN4-204ENST00000466411 EIF3AQ14152 1382 aaKnown RBP9.85□□□□□ -0.83
CLDN4-204ENST00000466411 COL5A2P05997 1499 aaPredicted RBP9.85□□□□□ -0.83
CLDN4-204ENST00000466411 DDB1Q16531 1140 aa9.84□□□□□ -0.83
CLDN4-204ENST00000466411 CLEC11AQ9Y240 323 aa9.84□□□□□ -0.83
CLDN4-204ENST00000466411 ADGRB1O14514 1584 aa9.84□□□□□ -0.83
CLDN4-204ENST00000466411 PNPLA7Q6ZV29 1317 aa9.83□□□□□ -0.84
CLDN4-204ENST00000466411 CRB1P82279 1406 aa9.83□□□□□ -0.84
CLDN4-204ENST00000466411 POLD1P28340 1107 aa9.83□□□□□ -0.84
CLDN4-204ENST00000466411 L3MBTL2Q969R5 705 aa9.83□□□□□ -0.84
CLDN4-204ENST00000466411 SIN3AQ96ST3 1273 aa9.83□□□□□ -0.84
CLDN4-204ENST00000466411 AKAP12Q02952 1782 aa9.83□□□□□ -0.84
CLDN4-204ENST00000466411 TNS2Q63HR2 1409 aa9.82□□□□□ -0.84
CLDN4-204ENST00000466411 TUBGCP6Q96RT7 1819 aa9.82□□□□□ -0.84
CLDN4-204ENST00000466411 SLC24A1O60721 1099 aa9.82□□□□□ -0.84
CLDN4-204ENST00000466411 PITPNM1O00562 1244 aa9.81□□□□□ -0.84
CLDN4-204ENST00000466411 PAK3O75914 559 aaPredicted RBP9.81□□□□□ -0.84
CLDN4-204ENST00000466411 HSPA1AP0DMV8 641 aaKnown RBP9.81□□□□□ -0.84
CLDN4-204ENST00000466411 HSPA1BP0DMV9 641 aaKnown RBP9.81□□□□□ -0.84
CLDN4-204ENST00000466411 ZBTB47Q9UFB7 747 aaPredicted RBP9.81□□□□□ -0.84
CLDN4-204ENST00000466411 KDM2AQ9Y2K7 1162 aa9.81□□□□□ -0.84
CLDN4-204ENST00000466411 WNK3Q9BYP7 1800 aa9.81□□□□□ -0.84
CLDN4-204ENST00000466411 ROCK2O75116 1388 aaKnown RBP9.8□□□□□ -0.84
CLDN4-204ENST00000466411 NUTM2GQ5VZR2 741 aa9.8□□□□□ -0.84
CLDN4-204ENST00000466411 PRAM1Q96QH2 718 aa9.8□□□□□ -0.84
Retrieved 100 of 20,778 RNA–protein pairs in 19.2 ms