RNA–Protein interactions for RNA: ENST00000466247.1

RBM6-215, Transcript of RNA binding motif protein 6, human

TSL 2

Gene RBM6, Length 500 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
RBM6-215	ENST00000466247	NBPF20	Q3BBV1	942 aa		9.39	□□□□□ -0.91
RBM6-215	ENST00000466247	CCDC116	Q8IYX3	515 aa		9.39	□□□□□ -0.91
RBM6-215	ENST00000466247	KLF16	Q9BXK1	252 aa	Predicted RBP	9.39	□□□□□ -0.91
RBM6-215	ENST00000466247	GMPR2	Q9P2T1	348 aa	Known RBP	9.39	□□□□□ -0.91
RBM6-215	ENST00000466247	ZIC2	O95409	532 aa	Predicted RBP	9.38	□□□□□ -0.91
RBM6-215	ENST00000466247	NR1H3	Q13133	447 aa		9.38	□□□□□ -0.91
RBM6-215	ENST00000466247	ITPKC	Q96DU7	683 aa		9.37	□□□□□ -0.91
RBM6-215	ENST00000466247	ZFAND3	Q9H8U3	227 aa		9.37	□□□□□ -0.91
RBM6-215	ENST00000466247	TBC1D2B	Q9UPU7	963 aa		9.37	□□□□□ -0.91
RBM6-215	ENST00000466247	EMILIN1	Q9Y6C2	1016 aa		9.37	□□□□□ -0.91
RBM6-215	ENST00000466247	BMP1	P13497	986 aa		9.36	□□□□□ -0.91
RBM6-215	ENST00000466247	MCM6	Q14566	821 aa		9.36	□□□□□ -0.91
RBM6-215	ENST00000466247	INTS6L	Q5JSJ4	861 aa	Known RBP	9.36	□□□□□ -0.91
RBM6-215	ENST00000466247	SENP2	Q9HC62	589 aa		9.36	□□□□□ -0.91
RBM6-215	ENST00000466247	PCDHB9	Q9Y5E1	797 aa		9.36	□□□□□ -0.91
RBM6-215	ENST00000466247	DHX9	Q08211	1270 aa	Known RBP	9.35	□□□□□ -0.91
RBM6-215	ENST00000466247	TRIM46	Q7Z4K8	759 aa		9.35	□□□□□ -0.91
RBM6-215	ENST00000466247	PGPEP1	Q9NXJ5	209 aa		9.35	□□□□□ -0.91
RBM6-215	ENST00000466247	ZNF330	Q9Y3S2	320 aa	Predicted RBP	9.35	□□□□□ -0.91
RBM6-215	ENST00000466247	C11orf95	C9JLR9	678 aa	Predicted RBP	9.34	□□□□□ -0.91
RBM6-215	ENST00000466247	PPP1R26	Q5T8A7	1209 aa	Predicted RBP	9.34	□□□□□ -0.91
RBM6-215	ENST00000466247	ZNF592	Q92610	1267 aa		9.34	□□□□□ -0.91
RBM6-215	ENST00000466247	KIFC2	Q96AC6	838 aa		9.34	□□□□□ -0.91
RBM6-215	ENST00000466247	TRIM47	Q96LD4	638 aa		9.33	□□□□□ -0.92
RBM6-215	ENST00000466247	ESPN	B1AK53	854 aa		9.32	□□□□□ -0.92
RBM6-215	ENST00000466247	RAB15	P59190	212 aa		9.32	□□□□□ -0.92
RBM6-215	ENST00000466247	MCCD1	P59942	119 aa	Predicted RBP	9.32	□□□□□ -0.92
RBM6-215	ENST00000466247	MRPL14	Q6P1L8	145 aa	Known RBP	9.32	□□□□□ -0.92
RBM6-215	ENST00000466247	GDPD2	Q9HCC8	539 aa		9.32	□□□□□ -0.92
RBM6-215	ENST00000466247	SCARF1	Q14162	830 aa		9.31	□□□□□ -0.92
RBM6-215	ENST00000466247	SEPT12	Q8IYM1	358 aa		9.31	□□□□□ -0.92
RBM6-215	ENST00000466247	ABL2	P42684	1182 aa		9.3	□□□□□ -0.92
RBM6-215	ENST00000466247	FLII	Q13045	1269 aa		9.3	□□□□□ -0.92
RBM6-215	ENST00000466247	IRF5	Q13568	498 aa		9.3	□□□□□ -0.92
RBM6-215	ENST00000466247	MEIOB	Q8N635	442 aa		9.3	□□□□□ -0.92
RBM6-215	ENST00000466247	UPP2	O95045	317 aa		9.29	□□□□□ -0.92
RBM6-215	ENST00000466247	ZFP42	Q96MM3	310 aa		9.29	□□□□□ -0.92
RBM6-215	ENST00000466247	ERVH48-1	M5A8F1	160 aa		9.28	□□□□□ -0.92
RBM6-215	ENST00000466247	GIGYF1	O75420	1035 aa	Predicted RBP	9.28	□□□□□ -0.92
RBM6-215	ENST00000466247	SNRPB	P14678	240 aa	Known RBP	9.28	□□□□□ -0.92
RBM6-215	ENST00000466247	PURB	Q96QR8	312 aa	Known RBP	9.28	□□□□□ -0.92
RBM6-215	ENST00000466247	CBLB	Q13191	982 aa		9.27	□□□□□ -0.93
RBM6-215	ENST00000466247	RNF20	Q5VTR2	975 aa		9.27	□□□□□ -0.93
RBM6-215	ENST00000466247	CCDC125	Q86Z20	511 aa		9.27	□□□□□ -0.93
RBM6-215	ENST00000466247	LINC00528	Q8N1L1	170 aa		9.27	□□□□□ -0.93
RBM6-215	ENST00000466247	TMPRSS4	Q9NRS4	437 aa		9.27	□□□□□ -0.93
RBM6-215	ENST00000466247	COG6	Q9Y2V7	657 aa		9.27	□□□□□ -0.93
RBM6-215	ENST00000466247	EIF4G2	P78344	907 aa	Known RBP eCLIP	9.26	□□□□□ -0.93
RBM6-215	ENST00000466247	WASHC4	Q2M389	1173 aa		9.26	□□□□□ -0.93
RBM6-215	ENST00000466247	C6orf118	Q5T5N4	469 aa		9.26	□□□□□ -0.93
RBM6-215	ENST00000466247		Q6ZVU0	165 aa		9.26	□□□□□ -0.93
RBM6-215	ENST00000466247	TRIM52	Q96A61	297 aa		9.26	□□□□□ -0.93
RBM6-215	ENST00000466247	TSEN34	Q9BSV6	310 aa	Known RBP	9.26	□□□□□ -0.93
RBM6-215	ENST00000466247	BMP2	P12643	396 aa		9.25	□□□□□ -0.93
RBM6-215	ENST00000466247	ZNF784	Q8NCA9	323 aa	Predicted RBP	9.25	□□□□□ -0.93
RBM6-215	ENST00000466247	ZNF775	Q96BV0	537 aa	Predicted RBP	9.25	□□□□□ -0.93
RBM6-215	ENST00000466247	VAC14	Q08AM6	782 aa		9.24	□□□□□ -0.93
RBM6-215	ENST00000466247	RAD21	O60216	631 aa		9.23	□□□□□ -0.93
RBM6-215	ENST00000466247	LILRA1	O75019	489 aa		9.23	□□□□□ -0.93
RBM6-215	ENST00000466247	UBTF	P17480	764 aa	Known RBP	9.23	□□□□□ -0.93
RBM6-215	ENST00000466247	WWC1	Q8IX03	1113 aa		9.23	□□□□□ -0.93
RBM6-215	ENST00000466247	POM121	Q96HA1	1249 aa		9.22	□□□□□ -0.93
RBM6-215	ENST00000466247	CYLD	Q9NQC7	956 aa		9.22	□□□□□ -0.93
RBM6-215	ENST00000466247	CEP126	Q9P2H0	1117 aa		9.22	□□□□□ -0.93
RBM6-215	ENST00000466247	AGBL1	Q96MI9	1066 aa		9.21	□□□□□ -0.94
RBM6-215	ENST00000466247	ADH1A	P07327	375 aa		9.2	□□□□□ -0.94
RBM6-215	ENST00000466247	RELB	Q01201	579 aa		9.2	□□□□□ -0.94
RBM6-215	ENST00000466247	PCDHB11	Q9Y5F2	797 aa		9.2	□□□□□ -0.94
RBM6-215	ENST00000466247	SPINT1	O43278	529 aa		9.19	□□□□□ -0.94
RBM6-215	ENST00000466247	ADD1	P35611	737 aa	Known RBP	9.19	□□□□□ -0.94
RBM6-215	ENST00000466247	SOX11	P35716	441 aa		9.19	□□□□□ -0.94
RBM6-215	ENST00000466247	CC2D2B	Q6DHV5	1058 aa		9.19	□□□□□ -0.94
RBM6-215	ENST00000466247	MAN1A2	O60476	641 aa		9.18	□□□□□ -0.94
RBM6-215	ENST00000466247	ERVK-9	P63128	1117 aa		9.18	□□□□□ -0.94
RBM6-215	ENST00000466247	SOS2	Q07890	1332 aa	Predicted RBP	9.18	□□□□□ -0.94
RBM6-215	ENST00000466247	SEMA3F	Q13275	785 aa		9.18	□□□□□ -0.94
RBM6-215	ENST00000466247	SOBP	A7XYQ1	873 aa		9.17	□□□□□ -0.94
RBM6-215	ENST00000466247	SLFNL1	Q499Z3	407 aa		9.17	□□□□□ -0.94
RBM6-215	ENST00000466247	ZNF395	Q9H8N7	513 aa	Predicted RBP	9.17	□□□□□ -0.94
RBM6-215	ENST00000466247	TTLL8	A6PVC2	850 aa		9.16	□□□□□ -0.94
RBM6-215	ENST00000466247	PTGIR	P43119	386 aa		9.16	□□□□□ -0.94
RBM6-215	ENST00000466247	RNF135	Q8IUD6	432 aa		9.16	□□□□□ -0.94
RBM6-215	ENST00000466247	CCDC85A	Q96PX6	553 aa	Predicted RBP	9.16	□□□□□ -0.94
RBM6-215	ENST00000466247	ESF1	Q9H501	851 aa	Known RBP	9.16	□□□□□ -0.94
RBM6-215	ENST00000466247	PHTF2	Q8N3S3	785 aa		9.15	□□□□□ -0.94
RBM6-215	ENST00000466247	KDF1	Q8NAX2	398 aa	Predicted RBP	9.15	□□□□□ -0.94
RBM6-215	ENST00000466247	DNMT3L	Q9UJW3	386 aa		9.15	□□□□□ -0.94
RBM6-215	ENST00000466247	GTF3C3	Q9Y5Q9	886 aa		9.15	□□□□□ -0.94
RBM6-215	ENST00000466247	ATP5J2-PTCD1	G3V325	749 aa		9.14	□□□□□ -0.95
RBM6-215	ENST00000466247	TERT	O14746	1132 aa	Known RBP	9.14	□□□□□ -0.95
RBM6-215	ENST00000466247	SCTR	P47872	440 aa		9.14	□□□□□ -0.95
RBM6-215	ENST00000466247	INSM2	Q96T92	566 aa	Predicted RBP	9.14	□□□□□ -0.95
RBM6-215	ENST00000466247	POLM	Q9NP87	494 aa	Predicted RBP	9.14	□□□□□ -0.95
RBM6-215	ENST00000466247	NXF1	Q9UBU9	619 aa	Known RBP	9.14	□□□□□ -0.95
RBM6-215	ENST00000466247	ZNF800	Q2TB10	664 aa	Predicted RBP eCLIP	9.13	□□□□□ -0.95	2e-7	■■□□□ 12.4
RBM6-215	ENST00000466247	CYP2U1	Q7Z449	544 aa		9.13	□□□□□ -0.95
RBM6-215	ENST00000466247	CDCA7	Q9BWT1	371 aa	Predicted RBP	9.13	□□□□□ -0.95
RBM6-215	ENST00000466247	DOLK	Q9UPQ8	538 aa		9.13	□□□□□ -0.95
RBM6-215	ENST00000466247	FIGNL2	A6NMB9	653 aa		9.12	□□□□□ -0.95
RBM6-215	ENST00000466247	MYC	P01106	439 aa	Predicted RBP	9.12	□□□□□ -0.95

Retrieved 100 of 20,778 RNA–protein pairs in 24.6 ms