RNA–Protein interactions for RNA: ENST00000466217.5

ATG9A-219, Transcript of autophagy related 9A, humanhuman

TSL 2

Gene ATG9A, Length 594 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATG9A-219ENST00000466217 PPP1R1BQ9UD71 204 aaPredicted RBP19.85■□□□□ 0.77
ATG9A-219ENST00000466217 CPSF1Q10570 1443 aaKnown RBP19.85■□□□□ 0.77
ATG9A-219ENST00000466217 EVC2Q86UK5 1308 aa19.84■□□□□ 0.77
ATG9A-219ENST00000466217 YY1P25490 414 aa19.84■□□□□ 0.77
ATG9A-219ENST00000466217 ZBTB7CA1YPR0 619 aa19.83■□□□□ 0.77
ATG9A-219ENST00000466217 ARHGEF25Q86VW2 580 aa19.83■□□□□ 0.77
ATG9A-219ENST00000466217 KCNH5Q8NCM2 988 aa19.83■□□□□ 0.77
ATG9A-219ENST00000466217 ZNF692Q9BU19 519 aaPredicted RBP19.83■□□□□ 0.77
ATG9A-219ENST00000466217 WNK3Q9BYP7 1800 aa19.83■□□□□ 0.76
ATG9A-219ENST00000466217 AXIN2Q9Y2T1 843 aa19.82■□□□□ 0.76
ATG9A-219ENST00000466217 TRPM1Q7Z4N2 1603 aa19.82■□□□□ 0.76
ATG9A-219ENST00000466217 CARD10Q9BWT7 1032 aa19.81■□□□□ 0.76
ATG9A-219ENST00000466217 ANO8Q9HCE9 1232 aaPredicted RBP19.81■□□□□ 0.76
ATG9A-219ENST00000466217 CASZ1Q86V15 1759 aa19.8■□□□□ 0.76
ATG9A-219ENST00000466217 TTC21BQ7Z4L5 1316 aa19.8■□□□□ 0.76
ATG9A-219ENST00000466217 TTC21AQ8NDW8 1320 aa19.8■□□□□ 0.76
ATG9A-219ENST00000466217 DCAF8L1A6NGE4 600 aa19.8■□□□□ 0.76
ATG9A-219ENST00000466217 MARCH10Q8NA82 808 aaPredicted RBP19.8■□□□□ 0.76
ATG9A-219ENST00000466217 ABCC6O95255 1503 aa19.79■□□□□ 0.76
ATG9A-219ENST00000466217 AKAP12Q02952 1782 aa19.78■□□□□ 0.76
ATG9A-219ENST00000466217 PROM2Q8N271 834 aa19.78■□□□□ 0.76
ATG9A-219ENST00000466217 L3MBTL2Q969R5 705 aa19.78■□□□□ 0.76
ATG9A-219ENST00000466217 PTF1AQ7RTS3 328 aa19.77■□□□□ 0.76
ATG9A-219ENST00000466217 NFAT5O94916 1531 aa19.76■□□□□ 0.75
ATG9A-219ENST00000466217 CCDC7Q96M83 1385 aa19.76■□□□□ 0.75
ATG9A-219ENST00000466217 EXOC5O00471 708 aa19.74■□□□□ 0.75
ATG9A-219ENST00000466217 CSB-PGBD3P0DP91 1061 aa19.74■□□□□ 0.75
ATG9A-219ENST00000466217 ROCK2O75116 1388 aaKnown RBP19.73■□□□□ 0.75
ATG9A-219ENST00000466217 RGPD5Q99666 1765 aa19.73■□□□□ 0.75
ATG9A-219ENST00000466217 TNS2Q63HR2 1409 aa19.73■□□□□ 0.75
ATG9A-219ENST00000466217 PTGER2P43116 358 aa19.72■□□□□ 0.75
ATG9A-219ENST00000466217 TXNRD1Q16881 649 aa19.72■□□□□ 0.75
ATG9A-219ENST00000466217 STK32BQ9NY57 414 aa19.72■□□□□ 0.75
ATG9A-219ENST00000466217 KTN1Q86UP2 1357 aaKnown RBP19.71■□□□□ 0.75
ATG9A-219ENST00000466217 PDGFDQ9GZP0 370 aaPredicted RBP19.71■□□□□ 0.75
ATG9A-219ENST00000466217 USP31Q70CQ4 1352 aa19.7■□□□□ 0.74
ATG9A-219ENST00000466217 SBNO2Q9Y2G9 1366 aa19.7■□□□□ 0.74
ATG9A-219ENST00000466217 ZBTB7AO95365 584 aa19.7■□□□□ 0.74
ATG9A-219ENST00000466217 SLC15A2Q16348 729 aa19.7■□□□□ 0.74
ATG9A-219ENST00000466217 USP54Q70EL1 1684 aa19.69■□□□□ 0.74
ATG9A-219ENST00000466217 MON2Q7Z3U7 1717 aa19.69■□□□□ 0.74
ATG9A-219ENST00000466217 SOX12O15370 315 aa19.69■□□□□ 0.74
ATG9A-219ENST00000466217 MYOM1P52179 1685 aa19.68■□□□□ 0.74
ATG9A-219ENST00000466217 NHSQ6T4R5 1651 aa19.68■□□□□ 0.74
ATG9A-219ENST00000466217 UTRNP46939 3433 aa19.67■□□□□ 0.74
ATG9A-219ENST00000466217 MTFR1LQ9H019 292 aa19.67■□□□□ 0.74
ATG9A-219ENST00000466217 ERBB3P21860 1342 aa19.67■□□□□ 0.74
ATG9A-219ENST00000466217 ATF5Q9Y2D1 282 aaPredicted RBP19.65■□□□□ 0.74
ATG9A-219ENST00000466217 SIN3AQ96ST3 1273 aa19.64■□□□□ 0.73
ATG9A-219ENST00000466217 SGIP1Q9BQI5 828 aa19.64■□□□□ 0.73
ATG9A-219ENST00000466217 CD163L1Q9NR16 1453 aa19.63■□□□□ 0.73
ATG9A-219ENST00000466217 IL2RBP14784 551 aa19.63■□□□□ 0.73
ATG9A-219ENST00000466217 PAPPAQ13219 1627 aa19.62■□□□□ 0.73
ATG9A-219ENST00000466217 SUGP2Q8IX01 1082 aaKnown RBP eCLIP19.62■□□□□ 0.73
ATG9A-219ENST00000466217 SYT17Q9BSW7 474 aa19.62■□□□□ 0.73
ATG9A-219ENST00000466217 FHDC1Q9C0D6 1143 aaPredicted RBP19.61■□□□□ 0.73
ATG9A-219ENST00000466217 NLRP2Q9NX02 1062 aa19.61■□□□□ 0.73
ATG9A-219ENST00000466217 MAP3K5Q99683 1374 aa19.6■□□□□ 0.73
ATG9A-219ENST00000466217 NME9Q86XW9 330 aa19.6■□□□□ 0.73
ATG9A-219ENST00000466217 ACSBG1Q96GR2 724 aa19.6■□□□□ 0.73
ATG9A-219ENST00000466217 EDC4Q6P2E9 1401 aaKnown RBP19.59■□□□□ 0.73
ATG9A-219ENST00000466217 ANKRD24Q8TF21 1146 aa19.59■□□□□ 0.73
ATG9A-219ENST00000466217 LTN1O94822 1766 aa19.59■□□□□ 0.73
ATG9A-219ENST00000466217 NEUROD1Q13562 356 aa19.58■□□□□ 0.72
ATG9A-219ENST00000466217 HDGFL2Q7Z4V5 671 aaPredicted RBP19.58■□□□□ 0.72
ATG9A-219ENST00000466217 BTAF1O14981 1849 aa19.58■□□□□ 0.72
ATG9A-219ENST00000466217 ZNF784Q8NCA9 323 aaPredicted RBP19.57■□□□□ 0.72
ATG9A-219ENST00000466217 PUS7Q96PZ0 661 aaKnown RBP19.57■□□□□ 0.72
ATG9A-219ENST00000466217 ARXQ96QS3 562 aa19.57■□□□□ 0.72
ATG9A-219ENST00000466217 TMC1Q8TDI8 760 aa19.55■□□□□ 0.72
ATG9A-219ENST00000466217 CARD11Q9BXL7 1154 aa19.55■□□□□ 0.72
ATG9A-219ENST00000466217 TERF2IPQ9NYB0 399 aa19.55■□□□□ 0.72
ATG9A-219ENST00000466217 ZNF827Q17R98 1081 aa19.54■□□□□ 0.72
ATG9A-219ENST00000466217 SLC27A3Q5K4L6 730 aa19.54■□□□□ 0.72
ATG9A-219ENST00000466217 SLC12A5Q9H2X9 1139 aa19.54■□□□□ 0.72
ATG9A-219ENST00000466217 LRRC4BQ9NT99 713 aa19.54■□□□□ 0.72
ATG9A-219ENST00000466217 CHD4Q14839 1912 aa19.53■□□□□ 0.72
ATG9A-219ENST00000466217 SLC16A10Q8TF71 515 aa19.53■□□□□ 0.72
ATG9A-219ENST00000466217 IP6K1Q92551 441 aa19.53■□□□□ 0.72
ATG9A-219ENST00000466217 A0A1W2PP64 1363 aa19.53■□□□□ 0.72
ATG9A-219ENST00000466217 FAM208AQ9UK61 1670 aaKnown RBP19.52■□□□□ 0.72
ATG9A-219ENST00000466217 QSER1Q2KHR3 1735 aa19.52■□□□□ 0.72
ATG9A-219ENST00000466217 AKT1S1Q96B36 256 aa19.52■□□□□ 0.72
ATG9A-219ENST00000466217 KAT6BQ8WYB5 2073 aa19.49■□□□□ 0.71
ATG9A-219ENST00000466217 COL24A1Q17RW2 1714 aa19.48■□□□□ 0.71
ATG9A-219ENST00000466217 ANKRD36BQ8N2N9 1353 aa19.47■□□□□ 0.71
ATG9A-219ENST00000466217 DDX54Q8TDD1 881 aaKnown RBP19.47■□□□□ 0.71
ATG9A-219ENST00000466217 POLD1P28340 1107 aa19.46■□□□□ 0.71
ATG9A-219ENST00000466217 PNPLA7Q6ZV29 1317 aa19.46■□□□□ 0.71
ATG9A-219ENST00000466217 SLC24A1O60721 1099 aa19.45■□□□□ 0.7
ATG9A-219ENST00000466217 TRIM26Q12899 539 aaPredicted RBP19.45■□□□□ 0.7
ATG9A-219ENST00000466217 COG3Q96JB2 828 aa19.44■□□□□ 0.7
ATG9A-219ENST00000466217 MAP3K19Q56UN5 1328 aa19.44■□□□□ 0.7
ATG9A-219ENST00000466217 NSD2O96028 1365 aa19.44■□□□□ 0.7
ATG9A-219ENST00000466217 GOLGB1Q14789 3259 aaKnown RBP19.43■□□□□ 0.7
ATG9A-219ENST00000466217 HOXC9P31274 260 aa19.43■□□□□ 0.7
ATG9A-219ENST00000466217 PRIM1P49642 420 aaKnown RBP19.43■□□□□ 0.7
ATG9A-219ENST00000466217 GPR162Q16538 588 aa19.43■□□□□ 0.7
ATG9A-219ENST00000466217 LTV1Q96GA3 475 aaPredicted RBP19.43■□□□□ 0.7
ATG9A-219ENST00000466217 LY75O60449 1722 aa19.42■□□□□ 0.7
Retrieved 100 of 20,778 RNA–protein pairs in 25.9 ms