RNA–Protein interactions for RNA: ENST00000466154.5

SLX4-202, Transcript of SLX4 structure-specific endonuclease subunit, humanhuman

TSL 1 (best)

Gene SLX4, Length 3,228 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SLX4-202ENST00000466154 RIMBP3BA6NNM3 1639 aa20.6■□□□□ 0.89
SLX4-202ENST00000466154 RIMBP3Q9UFD9 1639 aa20.6■□□□□ 0.89
SLX4-202ENST00000466154 C22orf23Q9BZE7 217 aa20.6■□□□□ 0.89
SLX4-202ENST00000466154 DIP2BQ9P265 1576 aa20.6■□□□□ 0.89
SLX4-202ENST00000466154 PRR36Q9H6K5 1346 aa20.6■□□□□ 0.89
SLX4-202ENST00000466154 HDAC1Q13547 482 aaPredicted RBP20.6■□□□□ 0.89
SLX4-202ENST00000466154 NCBP3Q53F19 620 aaKnown RBP20.6■□□□□ 0.89
SLX4-202ENST00000466154 CALD1Q05682 793 aaKnown RBP20.59■□□□□ 0.89
SLX4-202ENST00000466154 TBC1D2Q9BYX2 928 aa20.59■□□□□ 0.89
SLX4-202ENST00000466154 ALDH1L2Q3SY69 923 aa20.59■□□□□ 0.89
SLX4-202ENST00000466154 MIS18AQ9NYP9 233 aa20.59■□□□□ 0.89
SLX4-202ENST00000466154 HSP90AB2PQ58FF8 381 aa20.58■□□□□ 0.89
SLX4-202ENST00000466154 FAM135BQ49AJ0 1406 aa20.58■□□□□ 0.89
SLX4-202ENST00000466154 NUTM2GQ5VZR2 741 aa20.58■□□□□ 0.88
SLX4-202ENST00000466154 MRPL50Q8N5N7 158 aaKnown RBP20.58■□□□□ 0.88
SLX4-202ENST00000466154 EDC4Q6P2E9 1401 aaKnown RBP20.58■□□□□ 0.88
SLX4-202ENST00000466154 ACEP12821 1306 aa20.57■□□□□ 0.88
SLX4-202ENST00000466154 MED14O60244 1454 aa20.57■□□□□ 0.88
SLX4-202ENST00000466154 LTKP29376 864 aa20.57■□□□□ 0.88
SLX4-202ENST00000466154 TNRQ92752 1358 aa20.56■□□□□ 0.88
SLX4-202ENST00000466154 IFT57Q9NWB7 429 aa20.56■□□□□ 0.88
SLX4-202ENST00000466154 ATP7BP35670 1465 aa20.56■□□□□ 0.88
SLX4-202ENST00000466154 EIF4A2Q14240 407 aaKnown RBP20.55■□□□□ 0.88
SLX4-202ENST00000466154 CHD1LQ86WJ1 897 aa20.55■□□□□ 0.88
SLX4-202ENST00000466154 BRPF3Q9ULD4 1205 aa20.55■□□□□ 0.88
SLX4-202ENST00000466154 ROBO2Q9HCK4 1378 aa20.55■□□□□ 0.88
SLX4-202ENST00000466154 SMC5Q8IY18 1101 aa20.55■□□□□ 0.88
SLX4-202ENST00000466154 MAP2P11137 1827 aaKnown RBP20.55■□□□□ 0.88
SLX4-202ENST00000466154 CPS1P31327 1500 aa20.54■□□□□ 0.88
SLX4-202ENST00000466154 LMOD3Q0VAK6 560 aa20.54■□□□□ 0.88
SLX4-202ENST00000466154 C14orf37Q86TY3 774 aa20.54■□□□□ 0.88
SLX4-202ENST00000466154 NGDNQ8NEJ9 315 aaKnown RBP20.53■□□□□ 0.88
SLX4-202ENST00000466154 CFAP44Q96MT7 982 aa20.53■□□□□ 0.88
SLX4-202ENST00000466154 ZBTB7BO15156 539 aaPredicted RBP20.53■□□□□ 0.88
SLX4-202ENST00000466154 ZNF692Q9BU19 519 aaPredicted RBP20.53■□□□□ 0.88
SLX4-202ENST00000466154 TTC21BQ7Z4L5 1316 aa20.52■□□□□ 0.88
SLX4-202ENST00000466154 KIF20BQ96Q89 1820 aa20.52■□□□□ 0.88
SLX4-202ENST00000466154 CPSF1Q10570 1443 aaKnown RBP20.52■□□□□ 0.88
SLX4-202ENST00000466154 NUCB1Q02818 461 aa20.52■□□□□ 0.88
SLX4-202ENST00000466154 ZBTB4Q9P1Z0 1013 aaPredicted RBP20.52■□□□□ 0.88
SLX4-202ENST00000466154 FOXD4L1Q9NU39 408 aa20.51■□□□□ 0.87
SLX4-202ENST00000466154 FOXO3O43524 673 aa20.51■□□□□ 0.87
SLX4-202ENST00000466154 LTV1Q96GA3 475 aaPredicted RBP20.51■□□□□ 0.87
SLX4-202ENST00000466154 EID1Q9Y6B2 187 aa20.5■□□□□ 0.87
SLX4-202ENST00000466154 ZBTB7CA1YPR0 619 aa20.49■□□□□ 0.87
SLX4-202ENST00000466154 SLC4A10Q6U841 1118 aa20.49■□□□□ 0.87
SLX4-202ENST00000466154 NECTIN2Q92692 538 aa20.49■□□□□ 0.87
SLX4-202ENST00000466154 SPATA31D1Q6ZQQ2 1576 aa20.49■□□□□ 0.87
SLX4-202ENST00000466154 GZF1Q9H116 711 aaPredicted RBP20.49■□□□□ 0.87
SLX4-202ENST00000466154 RBM33Q96EV2 1170 aaKnown RBP20.49■□□□□ 0.87
SLX4-202ENST00000466154 TMEM2Q9UHN6 1383 aa20.49■□□□□ 0.87
SLX4-202ENST00000466154 ANKRD26Q9UPS8 1709 aa20.48■□□□□ 0.87
SLX4-202ENST00000466154 AMOTL2Q9Y2J4 779 aa20.48■□□□□ 0.87
SLX4-202ENST00000466154 AMPHP49418 695 aa20.48■□□□□ 0.87
SLX4-202ENST00000466154 HSCBQ8IWL3 235 aa20.48■□□□□ 0.87
SLX4-202ENST00000466154 AGLP35573 1532 aa20.47■□□□□ 0.87
SLX4-202ENST00000466154 DLC1Q96QB1 1528 aa20.46■□□□□ 0.87
SLX4-202ENST00000466154 ZNF853P0CG23 659 aa20.46■□□□□ 0.87
SLX4-202ENST00000466154 SIRT2Q8IXJ6 389 aa20.46■□□□□ 0.87
SLX4-202ENST00000466154 API5Q9BZZ5 524 aaKnown RBP20.46■□□□□ 0.87
SLX4-202ENST00000466154 HSP90AA1P07900 732 aaKnown RBP20.46■□□□□ 0.87
SLX4-202ENST00000466154 RTF1Q92541 710 aaKnown RBP20.46■□□□□ 0.87
SLX4-202ENST00000466154 ZNF428Q96B54 188 aa20.46■□□□□ 0.87
SLX4-202ENST00000466154 CHMP4BQ9H444 224 aaKnown RBP20.44■□□□□ 0.86
SLX4-202ENST00000466154 CDK12Q9NYV4 1490 aaPredicted RBP20.43■□□□□ 0.86
SLX4-202ENST00000466154 SLC4A2P04920 1241 aa20.43■□□□□ 0.86
SLX4-202ENST00000466154 C16orf71Q8IYS4 520 aaPredicted RBP20.43■□□□□ 0.86
SLX4-202ENST00000466154 AATKQ6ZMQ8 1374 aa20.43■□□□□ 0.86
SLX4-202ENST00000466154 GCC1Q96CN9 775 aa20.42■□□□□ 0.86
SLX4-202ENST00000466154 NLRP6P59044 892 aa20.42■□□□□ 0.86
SLX4-202ENST00000466154 ARHGAP45Q92619 1136 aa20.42■□□□□ 0.86
SLX4-202ENST00000466154 TSPYL4Q9UJ04 414 aa20.42■□□□□ 0.86
SLX4-202ENST00000466154 F6X3S4 739 aa20.42■□□□□ 0.86
SLX4-202ENST00000466154 SMARCA5O60264 1052 aaPredicted RBP20.42■□□□□ 0.86
SLX4-202ENST00000466154 HSP90AB1P08238 724 aaKnown RBP20.42■□□□□ 0.86
SLX4-202ENST00000466154 MAP3K19Q56UN5 1328 aa20.41■□□□□ 0.86
SLX4-202ENST00000466154 ANTXR1Q9H6X2 564 aa20.41■□□□□ 0.86
SLX4-202ENST00000466154 ABCC4O15439 1325 aa20.4■□□□□ 0.86
SLX4-202ENST00000466154 NRXN3Q9Y4C0 1643 aa20.4■□□□□ 0.86
SLX4-202ENST00000466154 VIRMAQ69YN4 1812 aaKnown RBP20.4■□□□□ 0.86
SLX4-202ENST00000466154 MTHFSDQ2M296 383 aaKnown RBP20.39■□□□□ 0.85
SLX4-202ENST00000466154 TBC1D9Q6ZT07 1266 aa20.39■□□□□ 0.85
SLX4-202ENST00000466154 RBM42Q9BTD8 480 aaKnown RBP20.39■□□□□ 0.85
SLX4-202ENST00000466154 CDC42BPGQ6DT37 1551 aa20.39■□□□□ 0.85
SLX4-202ENST00000466154 OTUD7AQ8TE49 926 aaPredicted RBP20.38■□□□□ 0.85
SLX4-202ENST00000466154 MEIS3Q99687 375 aa20.38■□□□□ 0.85
SLX4-202ENST00000466154 BMP2KLQ5H9B9 411 aa20.37■□□□□ 0.85
SLX4-202ENST00000466154 BRPF1P55201 1214 aaPredicted RBP20.36■□□□□ 0.85
SLX4-202ENST00000466154 ADAMTS13Q76LX8 1427 aa20.36■□□□□ 0.85
SLX4-202ENST00000466154 USHBP1Q8N6Y0 703 aa20.36■□□□□ 0.85
SLX4-202ENST00000466154 SETD1AO15047 1707 aaKnown RBP20.36■□□□□ 0.85
SLX4-202ENST00000466154 G2E3Q7L622 706 aa20.36■□□□□ 0.85
SLX4-202ENST00000466154 SIRT1Q96EB6 747 aa20.35■□□□□ 0.85
SLX4-202ENST00000466154 PLEKHG3A1L390 1219 aa20.35■□□□□ 0.85
SLX4-202ENST00000466154 CHL1O00533 1208 aa20.35■□□□□ 0.85
SLX4-202ENST00000466154 PTCH1Q13635 1447 aa20.35■□□□□ 0.85
SLX4-202ENST00000466154 TRHP20396 242 aaPredicted RBP20.34■□□□□ 0.85
SLX4-202ENST00000466154 EYA1Q99502 592 aa20.34■□□□□ 0.85
SLX4-202ENST00000466154 CHMP5Q9NZZ3 219 aa20.34■□□□□ 0.85
SLX4-202ENST00000466154 USP6P35125 1406 aa20.34■□□□□ 0.85
Retrieved 100 of 20,778 RNA–protein pairs in 15.9 ms