RNA–Protein interactions for RNA: ENST00000466045.1

CDHR3-203, Transcript of cadherin related family member 3, humanhuman

TSL 2

Gene CDHR3, Length 2,358 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDHR3-203ENST00000466045 IRF6O14896 467 aa11.6□□□□□ -0.55
CDHR3-203ENST00000466045 SETQ01105 290 aaPredicted RBP11.6□□□□□ -0.55
CDHR3-203ENST00000466045 RAB3GAP1Q15042 981 aa11.6□□□□□ -0.55
CDHR3-203ENST00000466045 TSC1Q92574 1164 aa11.6□□□□□ -0.55
CDHR3-203ENST00000466045 JARID2Q92833 1246 aaPredicted RBP11.6□□□□□ -0.55
CDHR3-203ENST00000466045 CTNNA3Q9UI47 895 aa11.6□□□□□ -0.55
CDHR3-203ENST00000466045 SH3BP1Q9Y3L3 701 aa11.6□□□□□ -0.55
CDHR3-203ENST00000466045 EIF3AQ14152 1382 aaKnown RBP11.59□□□□□ -0.55
CDHR3-203ENST00000466045 KIDINS220Q9ULH0 1771 aa11.59□□□□□ -0.55
CDHR3-203ENST00000466045 KIF1CO43896 1103 aaKnown RBP11.59□□□□□ -0.55
CDHR3-203ENST00000466045 PLIN1O60240 522 aa11.59□□□□□ -0.55
CDHR3-203ENST00000466045 TNNT3P45378 269 aaPredicted RBP11.59□□□□□ -0.55
CDHR3-203ENST00000466045 MAP2K1Q02750 393 aaPredicted RBP11.59□□□□□ -0.55
CDHR3-203ENST00000466045 EP400NLQ6ZTU2 488 aa11.59□□□□□ -0.55
CDHR3-203ENST00000466045 PIBF1Q8WXW3 757 aa11.59□□□□□ -0.55
CDHR3-203ENST00000466045 TNPO1Q92973 898 aaKnown RBP11.59□□□□□ -0.55
CDHR3-203ENST00000466045 SLC26A8Q96RN1 970 aa11.59□□□□□ -0.55
CDHR3-203ENST00000466045 NBPF11Q86T75 865 aa11.59□□□□□ -0.55
CDHR3-203ENST00000466045 DIP2CQ9Y2E4 1556 aa11.58□□□□□ -0.56
CDHR3-203ENST00000466045 FKBP5Q13451 457 aaPredicted RBP11.58□□□□□ -0.56
CDHR3-203ENST00000466045 SPTLC3Q9NUV7 552 aa11.58□□□□□ -0.56
CDHR3-203ENST00000466045 RSPH14Q9UHP6 348 aa11.58□□□□□ -0.56
CDHR3-203ENST00000466045 TRPM1Q7Z4N2 1603 aa11.58□□□□□ -0.56
CDHR3-203ENST00000466045 INO80Q9ULG1 1556 aaPredicted RBP11.58□□□□□ -0.56
CDHR3-203ENST00000466045 A2MP01023 1474 aa11.57□□□□□ -0.56
CDHR3-203ENST00000466045 E9PCH4 1651 aa11.57□□□□□ -0.56
CDHR3-203ENST00000466045 ABCA6Q8N139 1617 aa11.57□□□□□ -0.56
CDHR3-203ENST00000466045 RAD51AP2Q09MP3 1159 aa11.57□□□□□ -0.56
CDHR3-203ENST00000466045 SMC5Q8IY18 1101 aa11.57□□□□□ -0.56
CDHR3-203ENST00000466045 ZNF592Q92610 1267 aa11.57□□□□□ -0.56
CDHR3-203ENST00000466045 CARD11Q9BXL7 1154 aa11.57□□□□□ -0.56
CDHR3-203ENST00000466045 RASSF4Q9H2L5 321 aa11.57□□□□□ -0.56
CDHR3-203ENST00000466045 LAMC1P11047 1609 aa11.57□□□□□ -0.56
CDHR3-203ENST00000466045 DUOX2Q9NRD8 1548 aa11.57□□□□□ -0.56
CDHR3-203ENST00000466045 KDM4FA0A1W2PPD8 638 aa11.56□□□□□ -0.56
CDHR3-203ENST00000466045 FAM53CQ9NYF3 392 aa11.56□□□□□ -0.56
CDHR3-203ENST00000466045 DIAPH3Q9NSV4 1193 aa11.56□□□□□ -0.56
CDHR3-203ENST00000466045 NBPF9Q3BBW0 867 aa11.55□□□□□ -0.56
CDHR3-203ENST00000466045 MED4Q9NPJ6 270 aa11.55□□□□□ -0.56
CDHR3-203ENST00000466045 TTC36A6NLP5 189 aa11.55□□□□□ -0.56
CDHR3-203ENST00000466045 KIF3BO15066 747 aa11.55□□□□□ -0.56
CDHR3-203ENST00000466045 MUM1L1Q5H9M0 696 aa11.55□□□□□ -0.56
CDHR3-203ENST00000466045 REREQ9P2R6 1566 aa11.54□□□□□ -0.56
CDHR3-203ENST00000466045 PRAG1Q86YV5 1406 aa11.54□□□□□ -0.56
CDHR3-203ENST00000466045 ERBINQ96RT1 1412 aa11.54□□□□□ -0.56
CDHR3-203ENST00000466045 GOLIM4O00461 696 aa11.54□□□□□ -0.56
CDHR3-203ENST00000466045 CYP2C19P33261 490 aa11.54□□□□□ -0.56
CDHR3-203ENST00000466045 GGT6Q6P531 493 aa11.54□□□□□ -0.56
CDHR3-203ENST00000466045 KRT222Q8N1A0 295 aa11.54□□□□□ -0.56
CDHR3-203ENST00000466045 RBSNQ9H1K0 784 aa11.54□□□□□ -0.56
CDHR3-203ENST00000466045 BSDC1Q9NW68 430 aaPredicted RBP11.54□□□□□ -0.56
CDHR3-203ENST00000466045 REC8O95072 547 aa11.54□□□□□ -0.56
CDHR3-203ENST00000466045 SEMA3FQ13275 785 aa11.54□□□□□ -0.56
CDHR3-203ENST00000466045 NOLC1Q14978 699 aaKnown RBP eCLIP11.54□□□□□ -0.56
CDHR3-203ENST00000466045 MNS1Q8NEH6 495 aa11.54□□□□□ -0.56
CDHR3-203ENST00000466045 RBM28Q9NW13 759 aaKnown RBP11.54□□□□□ -0.56
CDHR3-203ENST00000466045 PLA2R1Q13018 1463 aa11.54□□□□□ -0.56
CDHR3-203ENST00000466045 NBPF10Q6P3W6 841 aaKnown RBP11.53□□□□□ -0.56
CDHR3-203ENST00000466045 SNX21Q969T3 373 aa11.53□□□□□ -0.56
CDHR3-203ENST00000466045 AGLP35573 1532 aa11.53□□□□□ -0.56
CDHR3-203ENST00000466045 GOLGA6L22H0YM25 854 aa11.53□□□□□ -0.56
CDHR3-203ENST00000466045 RNF217Q8TC41 542 aa11.53□□□□□ -0.56
CDHR3-203ENST00000466045 ESF1Q9H501 851 aaKnown RBP11.53□□□□□ -0.56
CDHR3-203ENST00000466045 IGF2BP2Q9Y6M1 599 aaKnown RBP eCLIP11.53□□□□□ -0.56
CDHR3-203ENST00000466045 EIF2AK4Q9P2K8 1649 aaKnown RBP11.52□□□□□ -0.56
CDHR3-203ENST00000466045 GPRASP1Q5JY77 1395 aa11.52□□□□□ -0.56
CDHR3-203ENST00000466045 CASQ1P31415 396 aa11.52□□□□□ -0.57
CDHR3-203ENST00000466045 HNRNPH2P55795 449 aaKnown RBP11.52□□□□□ -0.57
CDHR3-203ENST00000466045 KDM2AQ9Y2K7 1162 aa11.52□□□□□ -0.57
CDHR3-203ENST00000466045 BLMP54132 1417 aaPredicted RBP11.52□□□□□ -0.57
CDHR3-203ENST00000466045 ST20-MTHFSA0A0A6YYL1 179 aa11.51□□□□□ -0.57
CDHR3-203ENST00000466045 HSCBQ8IWL3 235 aa11.51□□□□□ -0.57
CDHR3-203ENST00000466045 MYBBP1AQ9BQG0 1328 aaKnown RBP11.51□□□□□ -0.57
CDHR3-203ENST00000466045 SIGLEC1Q9BZZ2 1709 aa11.51□□□□□ -0.57
CDHR3-203ENST00000466045 GSCP56915 257 aaPredicted RBP11.5□□□□□ -0.57
CDHR3-203ENST00000466045 GOLGA6L2Q8N9W4 650 aaPredicted RBP11.5□□□□□ -0.57
CDHR3-203ENST00000466045 KIF18AQ8NI77 898 aa11.5□□□□□ -0.57
CDHR3-203ENST00000466045 PRDM15P57071 1507 aaPredicted RBP11.5□□□□□ -0.57
CDHR3-203ENST00000466045 CCDC189A1A4V9 331 aa11.5□□□□□ -0.57
CDHR3-203ENST00000466045 ZSCAN23Q3MJ62 389 aa11.5□□□□□ -0.57
CDHR3-203ENST00000466045 PPP6R1Q9UPN7 881 aa11.5□□□□□ -0.57
CDHR3-203ENST00000466045 NCBP1Q09161 790 aaKnown RBP11.49□□□□□ -0.57
CDHR3-203ENST00000466045 SPRYD3Q8NCJ5 442 aa11.49□□□□□ -0.57
CDHR3-203ENST00000466045 CDCA7LQ96GN5 454 aa11.49□□□□□ -0.57
CDHR3-203ENST00000466045 SGSM3Q96HU1 749 aa11.49□□□□□ -0.57
CDHR3-203ENST00000466045 DDX49Q9Y6V7 483 aaKnown RBP11.49□□□□□ -0.57
CDHR3-203ENST00000466045 RIOK3O14730 519 aaKnown RBP11.48□□□□□ -0.57
CDHR3-203ENST00000466045 ZKSCAN8Q15776 578 aaPredicted RBP11.48□□□□□ -0.57
CDHR3-203ENST00000466045 GOLGA6L6A8MZA4 724 aa11.48□□□□□ -0.57
CDHR3-203ENST00000466045 ZNF853P0CG23 659 aa11.48□□□□□ -0.57
CDHR3-203ENST00000466045 ERICH4A6NGS2 130 aa11.47□□□□□ -0.57
CDHR3-203ENST00000466045 FAM177BA6PVY3 158 aa11.47□□□□□ -0.57
CDHR3-203ENST00000466045 CHAF1AQ13111 956 aaPredicted RBP11.47□□□□□ -0.57
CDHR3-203ENST00000466045 SWT1Q5T5J6 900 aaKnown RBP11.47□□□□□ -0.57
CDHR3-203ENST00000466045 GRWD1Q9BQ67 446 aaKnown RBP eCLIP11.47□□□□□ -0.57
CDHR3-203ENST00000466045 CXorf56Q9H5V9 222 aa11.47□□□□□ -0.57
CDHR3-203ENST00000466045 RNF17Q9BXT8 1623 aaKnown RBP11.47□□□□□ -0.57
CDHR3-203ENST00000466045 SSR1P43307 286 aaKnown RBP11.47□□□□□ -0.57
CDHR3-203ENST00000466045 TDO2P48775 406 aa11.47□□□□□ -0.57
CDHR3-203ENST00000466045 PRIM1P49642 420 aaKnown RBP11.46□□□□□ -0.57
Retrieved 100 of 20,778 RNA–protein pairs in 30 ms