RNA–Protein interactions for RNA: ENST00000464752.1

SRRM3-201, Transcript of serine/arginine repetitive matrix 3, humanhuman

TSL 2

Gene SRRM3, Length 2,797 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRRM3-201ENST00000464752 ANKRD45Q5TZF3 282 aa25.75■■□□□ 1.71
SRRM3-201ENST00000464752 C8orf58Q8NAV2 365 aa25.75■■□□□ 1.71
SRRM3-201ENST00000464752 COG3Q96JB2 828 aa25.75■■□□□ 1.71
SRRM3-201ENST00000464752 EDC4Q6P2E9 1401 aaKnown RBP25.74■■□□□ 1.71
SRRM3-201ENST00000464752 IFT57Q9NWB7 429 aa25.74■■□□□ 1.71
SRRM3-201ENST00000464752 PPP6R1Q9UPN7 881 aa25.74■■□□□ 1.71
SRRM3-201ENST00000464752 BRPF1P55201 1214 aaPredicted RBP25.73■■□□□ 1.71
SRRM3-201ENST00000464752 ZNF428Q96B54 188 aa25.73■■□□□ 1.71
SRRM3-201ENST00000464752 ZNF853P0CG23 659 aa25.73■■□□□ 1.71
SRRM3-201ENST00000464752 TWISTNBQ3B726 338 aaPredicted RBP25.73■■□□□ 1.71
SRRM3-201ENST00000464752 CCDC61Q9Y6R9 512 aa25.73■■□□□ 1.71
SRRM3-201ENST00000464752 CALD1Q05682 793 aaKnown RBP25.72■■□□□ 1.71
SRRM3-201ENST00000464752 RIMBP3CA6NJZ7 1639 aa25.72■■□□□ 1.71
SRRM3-201ENST00000464752 RIMBP3BA6NNM3 1639 aa25.72■■□□□ 1.71
SRRM3-201ENST00000464752 RIMBP3Q9UFD9 1639 aa25.72■■□□□ 1.71
SRRM3-201ENST00000464752 SETD1AO15047 1707 aaKnown RBP25.71■■□□□ 1.71
SRRM3-201ENST00000464752 CPS1P31327 1500 aa25.71■■□□□ 1.71
SRRM3-201ENST00000464752 SIRT2Q8IXJ6 389 aa25.7■■□□□ 1.71
SRRM3-201ENST00000464752 SPATA31D1Q6ZQQ2 1576 aa25.7■■□□□ 1.7
SRRM3-201ENST00000464752 NUTM2FA1L443 756 aa25.69■■□□□ 1.7
SRRM3-201ENST00000464752 ARHGAP45Q92619 1136 aa25.69■■□□□ 1.7
SRRM3-201ENST00000464752 CFAP44Q96MT7 982 aa25.69■■□□□ 1.7
SRRM3-201ENST00000464752 AEBP1Q8IUX7 1158 aa25.68■■□□□ 1.7
SRRM3-201ENST00000464752 AGLP35573 1532 aa25.67■■□□□ 1.7
SRRM3-201ENST00000464752 DIP2BQ9P265 1576 aa25.67■■□□□ 1.7
SRRM3-201ENST00000464752 PRR36Q9H6K5 1346 aa25.67■■□□□ 1.7
SRRM3-201ENST00000464752 ABCF1Q8NE71 845 aaKnown RBP eCLIP25.66■■□□□ 1.7
SRRM3-201ENST00000464752 ESF1Q9H501 851 aaKnown RBP25.66■■□□□ 1.7
SRRM3-201ENST00000464752 CDK12Q9NYV4 1490 aaPredicted RBP25.66■■□□□ 1.7
SRRM3-201ENST00000464752 NRXN3Q9Y4C0 1643 aa25.66■■□□□ 1.7
SRRM3-201ENST00000464752 AATKQ6ZMQ8 1374 aa25.66■■□□□ 1.7
SRRM3-201ENST00000464752 PTCH1Q13635 1447 aa25.65■■□□□ 1.7
SRRM3-201ENST00000464752 ABCC4O15439 1325 aa25.65■■□□□ 1.7
SRRM3-201ENST00000464752 KRT24Q2M2I5 525 aa25.65■■□□□ 1.7
SRRM3-201ENST00000464752 HSCBQ8IWL3 235 aa25.64■■□□□ 1.69
SRRM3-201ENST00000464752 GCC1Q96CN9 775 aa25.64■■□□□ 1.69
SRRM3-201ENST00000464752 PIK3R4Q99570 1358 aa25.63■■□□□ 1.69
SRRM3-201ENST00000464752 BMP2KLQ5H9B9 411 aa25.63■■□□□ 1.69
SRRM3-201ENST00000464752 SULT6B1Q6IMI4 303 aa25.63■■□□□ 1.69
SRRM3-201ENST00000464752 ARXQ96QS3 562 aa25.63■■□□□ 1.69
SRRM3-201ENST00000464752 LMOD3Q0VAK6 560 aa25.62■■□□□ 1.69
SRRM3-201ENST00000464752 MCM4P33991 863 aa25.62■■□□□ 1.69
SRRM3-201ENST00000464752 CHMP5Q9NZZ3 219 aa25.62■■□□□ 1.69
SRRM3-201ENST00000464752 DLG5Q8TDM6 1919 aa25.62■■□□□ 1.69
SRRM3-201ENST00000464752 RBM25P49756 843 aaKnown RBP25.61■■□□□ 1.69
SRRM3-201ENST00000464752 SOX12O15370 315 aa25.61■■□□□ 1.69
SRRM3-201ENST00000464752 EIF4A2Q14240 407 aaKnown RBP25.61■■□□□ 1.69
SRRM3-201ENST00000464752 REREQ9P2R6 1566 aa25.6■■□□□ 1.69
SRRM3-201ENST00000464752 GZF1Q9H116 711 aaPredicted RBP25.6■■□□□ 1.69
SRRM3-201ENST00000464752 CHMP4BQ9H444 224 aaKnown RBP25.6■■□□□ 1.69
SRRM3-201ENST00000464752 MCM10Q7L590 875 aa25.59■■□□□ 1.69
SRRM3-201ENST00000464752 ZNF692Q9BU19 519 aaPredicted RBP25.58■■□□□ 1.69
SRRM3-201ENST00000464752 API5Q9BZZ5 524 aaKnown RBP25.58■■□□□ 1.69
SRRM3-201ENST00000464752 ROBO2Q9HCK4 1378 aa25.58■■□□□ 1.68
SRRM3-201ENST00000464752 TBC1D9Q6ZT07 1266 aa25.57■■□□□ 1.68
SRRM3-201ENST00000464752 HSP90AB2PQ58FF8 381 aa25.56■■□□□ 1.68
SRRM3-201ENST00000464752 KIF2CQ99661 725 aa25.56■■□□□ 1.68
SRRM3-201ENST00000464752 HDGFP51858 240 aaKnown RBP25.55■■□□□ 1.68
SRRM3-201ENST00000464752 ACEP12821 1306 aa25.55■■□□□ 1.68
SRRM3-201ENST00000464752 TTC21BQ7Z4L5 1316 aa25.55■■□□□ 1.68
SRRM3-201ENST00000464752 SIRT1Q96EB6 747 aa25.54■■□□□ 1.68
SRRM3-201ENST00000464752 CD2BP2O95400 341 aaKnown RBP25.53■■□□□ 1.68
SRRM3-201ENST00000464752 RBM42Q9BTD8 480 aaKnown RBP25.53■■□□□ 1.68
SRRM3-201ENST00000464752 MON2Q7Z3U7 1717 aa25.53■■□□□ 1.68
SRRM3-201ENST00000464752 C16orf71Q8IYS4 520 aaPredicted RBP25.52■■□□□ 1.68
SRRM3-201ENST00000464752 FOXD4L1Q9NU39 408 aa25.52■■□□□ 1.68
SRRM3-201ENST00000464752 SNX21Q969T3 373 aa25.51■■□□□ 1.67
SRRM3-201ENST00000464752 MIS18AQ9NYP9 233 aa25.51■■□□□ 1.67
SRRM3-201ENST00000464752 TECPR2O15040 1411 aa25.51■■□□□ 1.67
SRRM3-201ENST00000464752 HSP90AB1P08238 724 aaKnown RBP25.5■■□□□ 1.67
SRRM3-201ENST00000464752 GSPT1P15170 499 aaKnown RBP25.5■■□□□ 1.67
SRRM3-201ENST00000464752 C3P01024 1663 aa25.5■■□□□ 1.67
SRRM3-201ENST00000464752 TNRQ92752 1358 aa25.5■■□□□ 1.67
SRRM3-201ENST00000464752 TRAK2O60296 914 aa25.5■■□□□ 1.67
SRRM3-201ENST00000464752 CHL1O00533 1208 aa25.49■■□□□ 1.67
SRRM3-201ENST00000464752 PLEKHM2Q8IWE5 1019 aa25.49■■□□□ 1.67
SRRM3-201ENST00000464752 LTKP29376 864 aa25.49■■□□□ 1.67
SRRM3-201ENST00000464752 DDIT3P35638 169 aa25.49■■□□□ 1.67
SRRM3-201ENST00000464752 SLC26A8Q96RN1 970 aa25.49■■□□□ 1.67
SRRM3-201ENST00000464752 TMEM2Q9UHN6 1383 aa25.49■■□□□ 1.67
SRRM3-201ENST00000464752 APBB1O00213 710 aa25.48■■□□□ 1.67
SRRM3-201ENST00000464752 DCTPP1Q9H773 170 aa25.48■■□□□ 1.67
SRRM3-201ENST00000464752 INTS3Q68E01 1043 aaKnown RBP25.47■■□□□ 1.67
SRRM3-201ENST00000464752 AKAP12Q02952 1782 aa25.47■■□□□ 1.67
SRRM3-201ENST00000464752 FOXO3O43524 673 aa25.47■■□□□ 1.67
SRRM3-201ENST00000464752 OTUD7AQ8TE49 926 aaPredicted RBP25.47■■□□□ 1.67
SRRM3-201ENST00000464752 ITSN1Q15811 1721 aa25.46■■□□□ 1.67
SRRM3-201ENST00000464752 KNDC1Q76NI1 1749 aa25.46■■□□□ 1.67
SRRM3-201ENST00000464752 NCOA3Q9Y6Q9 1424 aa25.46■■□□□ 1.67
SRRM3-201ENST00000464752 L1TD1Q5T7N2 865 aaKnown RBP25.45■■□□□ 1.66
SRRM3-201ENST00000464752 CDC45O75419 566 aa25.44■■□□□ 1.66
SRRM3-201ENST00000464752 SMARCA5O60264 1052 aaPredicted RBP25.44■■□□□ 1.66
SRRM3-201ENST00000464752 TNPO1Q92973 898 aaKnown RBP25.44■■□□□ 1.66
SRRM3-201ENST00000464752 ADAMTS13Q76LX8 1427 aa25.44■■□□□ 1.66
SRRM3-201ENST00000464752 HSP90AA1P07900 732 aaKnown RBP25.44■■□□□ 1.66
SRRM3-201ENST00000464752 XRCC6P12956 609 aaKnown RBP eCLIP25.43■■□□□ 1.66
SRRM3-201ENST00000464752 PLPPR3Q6T4P5 718 aa25.43■■□□□ 1.66
SRRM3-201ENST00000464752 PLEKHG3A1L390 1219 aa25.43■■□□□ 1.66
SRRM3-201ENST00000464752 GOLGA6L3A6NEY3 463 aa25.43■■□□□ 1.66
SRRM3-201ENST00000464752 MEIS3Q99687 375 aa25.43■■□□□ 1.66
Retrieved 100 of 20,778 RNA–protein pairs in 20 ms