RNA–Protein interactions for RNA: ENST00000464198.5

CBWD1-210, Transcript of COBW domain containing 1, humanhuman

TSL 2

Gene CBWD1, Length 721 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CBWD1-210ENST00000464198 DIP2BQ9P265 1576 aa13.02□□□□□ -0.33
CBWD1-210ENST00000464198 CSPP1Q1MSJ5 1256 aa13.01□□□□□ -0.33
CBWD1-210ENST00000464198 GPBP1L1Q9HC44 474 aaPredicted RBP13.01□□□□□ -0.33
CBWD1-210ENST00000464198 CLIP1P30622 1438 aa13.01□□□□□ -0.33
CBWD1-210ENST00000464198 NUP153P49790 1475 aaKnown RBP13.01□□□□□ -0.33
CBWD1-210ENST00000464198 PCF11O94913 1555 aaKnown RBP13.01□□□□□ -0.33
CBWD1-210ENST00000464198 ATP10BO94823 1461 aa12.99□□□□□ -0.33
CBWD1-210ENST00000464198 CEP162Q5TB80 1403 aa12.99□□□□□ -0.33
CBWD1-210ENST00000464198 QPCTQ16769 361 aa12.99□□□□□ -0.33
CBWD1-210ENST00000464198 RC3H1Q5TC82 1133 aaKnown RBP12.99□□□□□ -0.33
CBWD1-210ENST00000464198 KDM4CQ9H3R0 1056 aa12.99□□□□□ -0.33
CBWD1-210ENST00000464198 ASXL2Q76L83 1435 aa12.98□□□□□ -0.33
CBWD1-210ENST00000464198 TTC24A2A3L6 582 aaPredicted RBP12.98□□□□□ -0.33
CBWD1-210ENST00000464198 KCNH2Q12809 1159 aa12.98□□□□□ -0.33
CBWD1-210ENST00000464198 LYPD8Q6UX82 237 aa12.98□□□□□ -0.33
CBWD1-210ENST00000464198 SNIP1Q8TAD8 396 aaKnown RBP12.98□□□□□ -0.33
CBWD1-210ENST00000464198 UNC93B1Q9H1C4 597 aa12.98□□□□□ -0.33
CBWD1-210ENST00000464198 LILRB3O75022 631 aa12.97□□□□□ -0.33
CBWD1-210ENST00000464198 AVPP01185 164 aa12.97□□□□□ -0.33
CBWD1-210ENST00000464198 CLK2P49760 499 aaKnown RBP12.97□□□□□ -0.33
CBWD1-210ENST00000464198 RSPH6AQ9H0K4 717 aa12.97□□□□□ -0.33
CBWD1-210ENST00000464198 HECW1Q76N89 1606 aa12.97□□□□□ -0.33
CBWD1-210ENST00000464198 CDK13Q14004 1512 aaKnown RBP12.97□□□□□ -0.33
CBWD1-210ENST00000464198 ABCC10Q5T3U5 1492 aa12.96□□□□□ -0.34
CBWD1-210ENST00000464198 PPRC1Q5VV67 1664 aaKnown RBP12.96□□□□□ -0.34
CBWD1-210ENST00000464198 SMPD1P17405 629 aa12.95□□□□□ -0.34
CBWD1-210ENST00000464198 AAASQ9NRG9 546 aa12.95□□□□□ -0.34
CBWD1-210ENST00000464198 ST8SIA5O15466 376 aa12.94□□□□□ -0.34
CBWD1-210ENST00000464198 SH3BP2P78314 561 aa12.94□□□□□ -0.34
CBWD1-210ENST00000464198 CRIPAKQ8N1N5 446 aa12.94□□□□□ -0.34
CBWD1-210ENST00000464198 FMN1Q68DA7 1419 aa12.94□□□□□ -0.34
CBWD1-210ENST00000464198 NUTM2BA6NNL0 878 aaPredicted RBP12.93□□□□□ -0.34
CBWD1-210ENST00000464198 NUTM2EB1AL46 878 aaPredicted RBP12.93□□□□□ -0.34
CBWD1-210ENST00000464198 NUTM2DQ5VT03 806 aaPredicted RBP12.93□□□□□ -0.34
CBWD1-210ENST00000464198 NUTM2AQ8IVF1 878 aaPredicted RBP12.93□□□□□ -0.34
CBWD1-210ENST00000464198 POLR3EQ9NVU0 708 aa12.93□□□□□ -0.34
CBWD1-210ENST00000464198 EPRSP07814 1512 aaKnown RBP12.93□□□□□ -0.34
CBWD1-210ENST00000464198 WDR7Q9Y4E6 1490 aa12.92□□□□□ -0.34
CBWD1-210ENST00000464198 MAP3K4Q9Y6R4 1608 aa12.92□□□□□ -0.34
CBWD1-210ENST00000464198 J3QL48 77 aa12.92□□□□□ -0.34
CBWD1-210ENST00000464198 F12P00748 615 aaPredicted RBP12.92□□□□□ -0.34
CBWD1-210ENST00000464198 FAM117AQ9C073 453 aa12.92□□□□□ -0.34
CBWD1-210ENST00000464198 GLI2P10070 1586 aa12.91□□□□□ -0.34
CBWD1-210ENST00000464198 FAM69CQ0P6D2 419 aa12.91□□□□□ -0.34
CBWD1-210ENST00000464198 RTL5Q5HYW3 569 aaPredicted RBP12.91□□□□□ -0.34
CBWD1-210ENST00000464198 ZNF787Q6DD87 383 aa12.91□□□□□ -0.34
CBWD1-210ENST00000464198 BAP1Q92560 729 aa12.91□□□□□ -0.34
CBWD1-210ENST00000464198 DDRGK1Q96HY6 314 aa12.91□□□□□ -0.34
CBWD1-210ENST00000464198 ATP1B4Q9UN42 357 aaPredicted RBP12.91□□□□□ -0.34
CBWD1-210ENST00000464198 PER1O15534 1290 aaPredicted RBP12.9□□□□□ -0.34
CBWD1-210ENST00000464198 CTHP32929 405 aa12.9□□□□□ -0.34
CBWD1-210ENST00000464198 LINC01559Q495D7 138 aa12.9□□□□□ -0.34
CBWD1-210ENST00000464198 EHBP1Q8NDI1 1231 aa12.9□□□□□ -0.34
CBWD1-210ENST00000464198 MAP10Q9P2G4 905 aa12.9□□□□□ -0.34
CBWD1-210ENST00000464198 CASKIN1Q8WXD9 1431 aa12.89□□□□□ -0.35
CBWD1-210ENST00000464198 SIAH2O43255 324 aa12.89□□□□□ -0.35
CBWD1-210ENST00000464198 CTC1Q2NKJ3 1217 aa12.89□□□□□ -0.35
CBWD1-210ENST00000464198 SH3D19Q5HYK7 790 aa12.89□□□□□ -0.35
CBWD1-210ENST00000464198 CFAP43Q8NDM7 1665 aa12.89□□□□□ -0.35
CBWD1-210ENST00000464198 PLEKHG3A1L390 1219 aa12.88□□□□□ -0.35
CBWD1-210ENST00000464198 SMCPP49901 116 aaPredicted RBP12.88□□□□□ -0.35
CBWD1-210ENST00000464198 ZNF511Q8NB15 262 aa12.88□□□□□ -0.35
CBWD1-210ENST00000464198 TSC1Q92574 1164 aa12.88□□□□□ -0.35
CBWD1-210ENST00000464198 KIF14Q15058 1648 aa12.88□□□□□ -0.35
CBWD1-210ENST00000464198 MAGI3Q5TCQ9 1506 aa12.88□□□□□ -0.35
CBWD1-210ENST00000464198 FYCO1Q9BQS8 1478 aa12.87□□□□□ -0.35
CBWD1-210ENST00000464198 SKIV2LQ15477 1246 aaKnown RBP12.87□□□□□ -0.35
CBWD1-210ENST00000464198 AXIN1O15169 862 aa12.86□□□□□ -0.35
CBWD1-210ENST00000464198 ABCA9Q8IUA7 1624 aa12.86□□□□□ -0.35
CBWD1-210ENST00000464198 TTC37Q6PGP7 1564 aa12.86□□□□□ -0.35
CBWD1-210ENST00000464198 POTECB2RU33 542 aa12.85□□□□□ -0.35
CBWD1-210ENST00000464198 HELBQ8NG08 1087 aaPredicted RBP12.85□□□□□ -0.35
CBWD1-210ENST00000464198 DACH1Q9UI36 760 aa12.85□□□□□ -0.35
CBWD1-210ENST00000464198 ALDH1A1P00352 501 aa12.84□□□□□ -0.35
CBWD1-210ENST00000464198 HPS1Q92902 700 aa12.84□□□□□ -0.35
CBWD1-210ENST00000464198 GNL3Q9BVP2 549 aaKnown RBP eCLIP12.83□□□□□ -0.36
CBWD1-210ENST00000464198 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP12.83□□□□□ -0.36
CBWD1-210ENST00000464198 FBXO31Q5XUX0 539 aaPredicted RBP12.82□□□□□ -0.36
CBWD1-210ENST00000464198 PROCA1Q8NCQ7 364 aaPredicted RBP12.82□□□□□ -0.36
CBWD1-210ENST00000464198 VPS8Q8N3P4 1428 aa12.81□□□□□ -0.36
CBWD1-210ENST00000464198 CCDC18Q5T9S5 1454 aa12.81□□□□□ -0.36
CBWD1-210ENST00000464198 MYO5CQ9NQX4 1742 aa12.8□□□□□ -0.36
CBWD1-210ENST00000464198 VARSP26640 1264 aaKnown RBP12.8□□□□□ -0.36
CBWD1-210ENST00000464198 PLEKHD1A6NEE1 506 aa12.79□□□□□ -0.36
CBWD1-210ENST00000464198 TLL2Q9Y6L7 1015 aa12.79□□□□□ -0.36
CBWD1-210ENST00000464198 CDC42BPAQ5VT25 1732 aa12.79□□□□□ -0.36
CBWD1-210ENST00000464198 CDC42BPBQ9Y5S2 1711 aa12.79□□□□□ -0.36
CBWD1-210ENST00000464198 TIAM1Q13009 1591 aa12.78□□□□□ -0.36
CBWD1-210ENST00000464198 KDM6BO15054 1643 aa12.78□□□□□ -0.36
CBWD1-210ENST00000464198 PPP2R2DQ66LE6 453 aa12.78□□□□□ -0.36
CBWD1-210ENST00000464198 FOXJ1Q92949 421 aa12.78□□□□□ -0.36
CBWD1-210ENST00000464198 TROQ12816 1431 aaPredicted RBP12.78□□□□□ -0.36
CBWD1-210ENST00000464198 CD109Q6YHK3 1445 aa12.78□□□□□ -0.36
CBWD1-210ENST00000464198 CTDSPL2Q05D32 466 aa12.77□□□□□ -0.37
CBWD1-210ENST00000464198 MPNDQ8N594 471 aa12.77□□□□□ -0.37
CBWD1-210ENST00000464198 WASF2Q9Y6W5 498 aa12.76□□□□□ -0.37
CBWD1-210ENST00000464198 NEUROD2Q15784 382 aa12.75□□□□□ -0.37
CBWD1-210ENST00000464198 GMPR2Q9P2T1 348 aaKnown RBP12.75□□□□□ -0.37
CBWD1-210ENST00000464198 COL17A1Q9UMD9 1497 aaPredicted RBP12.74□□□□□ -0.37
CBWD1-210ENST00000464198 C4orf48Q5BLP8 95 aa12.74□□□□□ -0.37
Retrieved 100 of 20,778 RNA–protein pairs in 62 ms