RNA–Protein interactions for RNA: ENST00000464187.1

COL5A1-205, Transcript of collagen type V alpha 1 chain, humanhuman

TSL 2

Gene COL5A1, Length 1,830 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL5A1-205ENST00000464187 PEAK1Q9H792 1746 aa19.02■□□□□ 0.64
COL5A1-205ENST00000464187 EIF4A2Q14240 407 aaKnown RBP19.02■□□□□ 0.63
COL5A1-205ENST00000464187 KIF24Q5T7B8 1368 aa19.01■□□□□ 0.63
COL5A1-205ENST00000464187 SOS2Q07890 1332 aaPredicted RBP19.01■□□□□ 0.63
COL5A1-205ENST00000464187 NFAT5O94916 1531 aa19.01■□□□□ 0.63
COL5A1-205ENST00000464187 ALS2Q96Q42 1657 aa19.01■□□□□ 0.63
COL5A1-205ENST00000464187 SLIT3O75094 1523 aa19■□□□□ 0.63
COL5A1-205ENST00000464187 HOXC9P31274 260 aa19■□□□□ 0.63
COL5A1-205ENST00000464187 PLEKHF1Q96S99 279 aa19■□□□□ 0.63
COL5A1-205ENST00000464187 FCHSD2O94868 740 aa18.99■□□□□ 0.63
COL5A1-205ENST00000464187 DUSP27Q5VZP5 1158 aa18.99■□□□□ 0.63
COL5A1-205ENST00000464187 EXOC6Q8TAG9 804 aa18.99■□□□□ 0.63
COL5A1-205ENST00000464187 HMOX1P09601 288 aa18.98■□□□□ 0.63
COL5A1-205ENST00000464187 TCP11L2Q8N4U5 519 aa18.98■□□□□ 0.63
COL5A1-205ENST00000464187 ARHGEF10O15013 1369 aa18.98■□□□□ 0.63
COL5A1-205ENST00000464187 GOLGA2Q08379 1002 aa18.97■□□□□ 0.63
COL5A1-205ENST00000464187 RSPH6AQ9H0K4 717 aa18.97■□□□□ 0.63
COL5A1-205ENST00000464187 PNNQ9H307 717 aaKnown RBP18.97■□□□□ 0.63
COL5A1-205ENST00000464187 RTL1A6NKG5 1358 aa18.97■□□□□ 0.63
COL5A1-205ENST00000464187 ARHGEF25Q86VW2 580 aa18.96■□□□□ 0.63
COL5A1-205ENST00000464187 NGEFQ8N5V2 710 aa18.96■□□□□ 0.63
COL5A1-205ENST00000464187 MED1Q15648 1581 aaPredicted RBP18.96■□□□□ 0.63
COL5A1-205ENST00000464187 IQSEC2Q5JU85 1478 aa18.96■□□□□ 0.63
COL5A1-205ENST00000464187 ZBTB7CA1YPR0 619 aa18.95■□□□□ 0.62
COL5A1-205ENST00000464187 PRKAR2BP31323 418 aa18.95■□□□□ 0.62
COL5A1-205ENST00000464187 IP6K1Q92551 441 aa18.95■□□□□ 0.62
COL5A1-205ENST00000464187 MAPK8IP3Q9UPT6 1336 aa18.95■□□□□ 0.62
COL5A1-205ENST00000464187 SLFN5Q08AF3 891 aa18.95■□□□□ 0.62
COL5A1-205ENST00000464187 NEUROD2Q15784 382 aa18.95■□□□□ 0.62
COL5A1-205ENST00000464187 CABLES1Q8TDN4 633 aa18.95■□□□□ 0.62
COL5A1-205ENST00000464187 RRP7AQ9Y3A4 280 aaKnown RBP18.95■□□□□ 0.62
COL5A1-205ENST00000464187 PLIN1O60240 522 aa18.93■□□□□ 0.62
COL5A1-205ENST00000464187 TRMT2AQ8IZ69 625 aaKnown RBP18.93■□□□□ 0.62
COL5A1-205ENST00000464187 NHSL1Q5SYE7 1610 aa18.93■□□□□ 0.62
COL5A1-205ENST00000464187 ZC3H6P61129 1189 aaKnown RBP18.93■□□□□ 0.62
COL5A1-205ENST00000464187 SULT6B1Q6IMI4 303 aa18.93■□□□□ 0.62
COL5A1-205ENST00000464187 LTN1O94822 1766 aa18.92■□□□□ 0.62
COL5A1-205ENST00000464187 NEFMP07197 916 aa18.92■□□□□ 0.62
COL5A1-205ENST00000464187 TOM1O60784 492 aa18.91■□□□□ 0.62
COL5A1-205ENST00000464187 AEBP1Q8IUX7 1158 aa18.91■□□□□ 0.62
COL5A1-205ENST00000464187 LTV1Q96GA3 475 aaPredicted RBP18.91■□□□□ 0.62
COL5A1-205ENST00000464187 ROBO1Q9Y6N7 1651 aa18.91■□□□□ 0.62
COL5A1-205ENST00000464187 WWC1Q8IX03 1113 aa18.9■□□□□ 0.62
COL5A1-205ENST00000464187 EYA1Q99502 592 aa18.9■□□□□ 0.62
COL5A1-205ENST00000464187 TMPOP42166 694 aaKnown RBP18.9■□□□□ 0.62
COL5A1-205ENST00000464187 NCBP3Q53F19 620 aaKnown RBP18.9■□□□□ 0.62
COL5A1-205ENST00000464187 PHACTR3Q96KR7 559 aa18.9■□□□□ 0.62
COL5A1-205ENST00000464187 SPINK5Q9NQ38 1064 aaPredicted RBP18.9■□□□□ 0.62
COL5A1-205ENST00000464187 IGSF1Q8N6C5 1336 aa18.9■□□□□ 0.62
COL5A1-205ENST00000464187 PHRF1Q9P1Y6 1649 aaKnown RBP18.89■□□□□ 0.62
COL5A1-205ENST00000464187 CCDC27Q2M243 656 aa18.89■□□□□ 0.61
COL5A1-205ENST00000464187 PHF23Q9BUL5 403 aaPredicted RBP18.89■□□□□ 0.61
COL5A1-205ENST00000464187 RGPD1P0DJD0 1748 aa18.88■□□□□ 0.61
COL5A1-205ENST00000464187 CRBNQ96SW2 442 aa18.88■□□□□ 0.61
COL5A1-205ENST00000464187 AXIN2Q9Y2T1 843 aa18.88■□□□□ 0.61
COL5A1-205ENST00000464187 E9PSI1 815 aa18.87■□□□□ 0.61
COL5A1-205ENST00000464187 LRRC59Q96AG4 307 aaKnown RBP18.87■□□□□ 0.61
COL5A1-205ENST00000464187 KDRP35968 1356 aa18.86■□□□□ 0.61
COL5A1-205ENST00000464187 RIPK4P57078 832 aa18.86■□□□□ 0.61
COL5A1-205ENST00000464187 PIP4K2BP78356 416 aa18.86■□□□□ 0.61
COL5A1-205ENST00000464187 AHDC1Q5TGY3 1603 aaPredicted RBP18.86■□□□□ 0.61
COL5A1-205ENST00000464187 KIAA0232Q92628 1395 aa18.85■□□□□ 0.61
COL5A1-205ENST00000464187 FANCIQ9NVI1 1328 aa18.85■□□□□ 0.61
COL5A1-205ENST00000464187 C20orf194Q5TEA3 1177 aa18.85■□□□□ 0.61
COL5A1-205ENST00000464187 CRYBG1Q9Y4K1 1723 aa18.85■□□□□ 0.61
COL5A1-205ENST00000464187 CPDO75976 1380 aa18.85■□□□□ 0.61
COL5A1-205ENST00000464187 UBAP1LF5GYI3 381 aa18.84■□□□□ 0.61
COL5A1-205ENST00000464187 HAP1P54257 671 aaPredicted RBP18.84■□□□□ 0.61
COL5A1-205ENST00000464187 NFE2L2Q16236 605 aa18.84■□□□□ 0.61
COL5A1-205ENST00000464187 TRIM35Q9UPQ4 493 aa18.84■□□□□ 0.61
COL5A1-205ENST00000464187 CHRNA2Q15822 529 aa18.84■□□□□ 0.61
COL5A1-205ENST00000464187 NBPF6Q5VWK0 638 aa18.84■□□□□ 0.61
COL5A1-205ENST00000464187 ANKRD24Q8TF21 1146 aa18.84■□□□□ 0.61
COL5A1-205ENST00000464187 NBPF4Q96M43 638 aa18.84■□□□□ 0.61
COL5A1-205ENST00000464187 WDR63Q8IWG1 891 aa18.83■□□□□ 0.6
COL5A1-205ENST00000464187 ERBB3P21860 1342 aa18.82■□□□□ 0.6
COL5A1-205ENST00000464187 USHBP1Q8N6Y0 703 aa18.82■□□□□ 0.6
COL5A1-205ENST00000464187 CERKQ8TCT0 537 aa18.81■□□□□ 0.6
COL5A1-205ENST00000464187 PRDM11Q9NQV5 511 aa18.81■□□□□ 0.6
COL5A1-205ENST00000464187 GOLGA6L2Q8N9W4 650 aaPredicted RBP18.79■□□□□ 0.6
COL5A1-205ENST00000464187 ABCC6O95255 1503 aa18.78■□□□□ 0.6
COL5A1-205ENST00000464187 COL18A1P39060 1754 aa18.77■□□□□ 0.6
COL5A1-205ENST00000464187 LMOD3Q0VAK6 560 aa18.77■□□□□ 0.59
COL5A1-205ENST00000464187 MTHFSDQ2M296 383 aaKnown RBP18.77■□□□□ 0.59
COL5A1-205ENST00000464187 ABCA3Q99758 1704 aa18.76■□□□□ 0.59
COL5A1-205ENST00000464187 MSH5O43196 834 aa18.76■□□□□ 0.59
COL5A1-205ENST00000464187 COL16A1Q07092 1604 aaPredicted RBP18.75■□□□□ 0.59
COL5A1-205ENST00000464187 CSB-PGBD3P0DP91 1061 aa18.75■□□□□ 0.59
COL5A1-205ENST00000464187 PHLPP1O60346 1717 aa18.75■□□□□ 0.59
COL5A1-205ENST00000464187 NCAPD2Q15021 1401 aa18.75■□□□□ 0.59
COL5A1-205ENST00000464187 BCAR3O75815 825 aa18.74■□□□□ 0.59
COL5A1-205ENST00000464187 NLRP2Q9NX02 1062 aa18.74■□□□□ 0.59
COL5A1-205ENST00000464187 RGPD5Q99666 1765 aa18.74■□□□□ 0.59
COL5A1-205ENST00000464187 FAM83GA6ND36 823 aa18.74■□□□□ 0.59
COL5A1-205ENST00000464187 GAS2L2Q8NHY3 880 aa18.74■□□□□ 0.59
COL5A1-205ENST00000464187 THUMPD2Q9BTF0 503 aaKnown RBP18.74■□□□□ 0.59
COL5A1-205ENST00000464187 IL16Q14005 1332 aa18.74■□□□□ 0.59
COL5A1-205ENST00000464187 MYH16Q9H6N6 1097 aa18.73■□□□□ 0.59
COL5A1-205ENST00000464187 COL22A1Q8NFW1 1626 aaPredicted RBP18.72■□□□□ 0.59
COL5A1-205ENST00000464187 CAMTA1Q9Y6Y1 1673 aa18.72■□□□□ 0.59
Retrieved 100 of 20,778 RNA–protein pairs in 14.7 ms