RNA–Protein interactions for RNA: ENST00000463209.1

TMEM254-208, Transcript of transmembrane protein 254, humanhuman

TSL 3

Gene TMEM254, Length 407 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM254-208ENST00000463209 WNK3Q9BYP7 1800 aa12.04□□□□□ -0.48
TMEM254-208ENST00000463209 FBLN1P23142 703 aa12.04□□□□□ -0.48
TMEM254-208ENST00000463209 PUS7Q96PZ0 661 aaKnown RBP12.04□□□□□ -0.48
TMEM254-208ENST00000463209 AATKQ6ZMQ8 1374 aa12.04□□□□□ -0.48
TMEM254-208ENST00000463209 USP31Q70CQ4 1352 aa12.04□□□□□ -0.48
TMEM254-208ENST00000463209 EIF4G2P78344 907 aaKnown RBP eCLIP12.03□□□□□ -0.48
TMEM254-208ENST00000463209 EP400Q96L91 3159 aa12.02□□□□□ -0.48
TMEM254-208ENST00000463209 LRRC37A3O60309 1634 aa12.02□□□□□ -0.49
TMEM254-208ENST00000463209 ONECUT3O60422 494 aaPredicted RBP12.02□□□□□ -0.49
TMEM254-208ENST00000463209 KRT27Q7Z3Y8 459 aa12.02□□□□□ -0.49
TMEM254-208ENST00000463209 ARHGEF25Q86VW2 580 aa12.02□□□□□ -0.49
TMEM254-208ENST00000463209 GGNBP2Q9H3C7 697 aa12.02□□□□□ -0.49
TMEM254-208ENST00000463209 NSD3Q9BZ95 1437 aa12.02□□□□□ -0.49
TMEM254-208ENST00000463209 C11orf95C9JLR9 678 aaPredicted RBP12.01□□□□□ -0.49
TMEM254-208ENST00000463209 KCNH5Q8NCM2 988 aa12.01□□□□□ -0.49
TMEM254-208ENST00000463209 CARD14Q9BXL6 1004 aa12.01□□□□□ -0.49
TMEM254-208ENST00000463209 CRB1P82279 1406 aa12.01□□□□□ -0.49
TMEM254-208ENST00000463209 CSB-PGBD3P0DP91 1061 aa12□□□□□ -0.49
TMEM254-208ENST00000463209 TOM1L2Q6ZVM7 507 aa12□□□□□ -0.49
TMEM254-208ENST00000463209 PARP4Q9UKK3 1724 aaKnown RBP12□□□□□ -0.49
TMEM254-208ENST00000463209 CDCA8Q53HL2 280 aa11.99□□□□□ -0.49
TMEM254-208ENST00000463209 TCP11L2Q8N4U5 519 aa11.99□□□□□ -0.49
TMEM254-208ENST00000463209 COG3Q96JB2 828 aa11.99□□□□□ -0.49
TMEM254-208ENST00000463209 RGPD2P0DJD1 1756 aa11.98□□□□□ -0.49
TMEM254-208ENST00000463209 PEAK1Q9H792 1746 aa11.98□□□□□ -0.49
TMEM254-208ENST00000463209 TNS1Q9HBL0 1735 aaKnown RBP11.98□□□□□ -0.49
TMEM254-208ENST00000463209 WDR17Q8IZU2 1322 aa11.98□□□□□ -0.49
TMEM254-208ENST00000463209 FYB1O15117 783 aa11.98□□□□□ -0.49
TMEM254-208ENST00000463209 SLC24A1O60721 1099 aa11.98□□□□□ -0.49
TMEM254-208ENST00000463209 LTV1Q96GA3 475 aaPredicted RBP11.98□□□□□ -0.49
TMEM254-208ENST00000463209 ABCC6O95255 1503 aa11.97□□□□□ -0.49
TMEM254-208ENST00000463209 MAP3K19Q56UN5 1328 aa11.97□□□□□ -0.49
TMEM254-208ENST00000463209 DEFB132Q7Z7B7 95 aa11.97□□□□□ -0.49
TMEM254-208ENST00000463209 RGPD1P0DJD0 1748 aa11.97□□□□□ -0.49
TMEM254-208ENST00000463209 RRS1Q15050 365 aaKnown RBP11.96□□□□□ -0.49
TMEM254-208ENST00000463209 BARGINQ6ZT62 677 aa11.96□□□□□ -0.49
TMEM254-208ENST00000463209 BLMP54132 1417 aaPredicted RBP11.95□□□□□ -0.5
TMEM254-208ENST00000463209 ANKRD26Q9UPS8 1709 aa11.95□□□□□ -0.5
TMEM254-208ENST00000463209 ANKRD24Q8TF21 1146 aa11.95□□□□□ -0.5
TMEM254-208ENST00000463209 NLRP2Q9NX02 1062 aa11.95□□□□□ -0.5
TMEM254-208ENST00000463209 ERBB3P21860 1342 aa11.94□□□□□ -0.5
TMEM254-208ENST00000463209 KIF7Q2M1P5 1343 aa11.93□□□□□ -0.5
TMEM254-208ENST00000463209 HOXC9P31274 260 aa11.93□□□□□ -0.5
TMEM254-208ENST00000463209 AMPHP49418 695 aa11.93□□□□□ -0.5
TMEM254-208ENST00000463209 PDE3BQ13370 1112 aa11.93□□□□□ -0.5
TMEM254-208ENST00000463209 PANK3Q9H999 370 aa11.93□□□□□ -0.5
TMEM254-208ENST00000463209 FAM208AQ9UK61 1670 aaKnown RBP11.93□□□□□ -0.5
TMEM254-208ENST00000463209 DISP2A7MBM2 1401 aa11.93□□□□□ -0.5
TMEM254-208ENST00000463209 TRIM37O94972 964 aa11.92□□□□□ -0.5
TMEM254-208ENST00000463209 TNNT2P45379 298 aaPredicted RBP11.92□□□□□ -0.5
TMEM254-208ENST00000463209 IP6K1Q92551 441 aa11.92□□□□□ -0.5
TMEM254-208ENST00000463209 CARD10Q9BWT7 1032 aa11.92□□□□□ -0.5
TMEM254-208ENST00000463209 THRAP3Q9Y2W1 955 aaKnown RBP11.92□□□□□ -0.5
TMEM254-208ENST00000463209 SF3B2Q13435 895 aaKnown RBP11.91□□□□□ -0.5
TMEM254-208ENST00000463209 USHBP1Q8N6Y0 703 aa11.91□□□□□ -0.5
TMEM254-208ENST00000463209 EMILIN1Q9Y6C2 1016 aa11.91□□□□□ -0.5
TMEM254-208ENST00000463209 SBF2Q86WG5 1849 aa11.9□□□□□ -0.5
TMEM254-208ENST00000463209 CGNL1Q0VF96 1302 aa11.9□□□□□ -0.5
TMEM254-208ENST00000463209 PPM1GO15355 546 aaPredicted RBP11.9□□□□□ -0.5
TMEM254-208ENST00000463209 EN1Q05925 392 aaPredicted RBP11.9□□□□□ -0.5
TMEM254-208ENST00000463209 DDB1Q16531 1140 aa11.9□□□□□ -0.5
TMEM254-208ENST00000463209 PTF1AQ7RTS3 328 aa11.9□□□□□ -0.5
TMEM254-208ENST00000463209 MAP2P11137 1827 aaKnown RBP11.9□□□□□ -0.5
TMEM254-208ENST00000463209 CCDC7Q96M83 1385 aa11.9□□□□□ -0.5
TMEM254-208ENST00000463209 TNS2Q63HR2 1409 aa11.89□□□□□ -0.51
TMEM254-208ENST00000463209 CNGB1Q14028 1251 aaPredicted RBP11.89□□□□□ -0.51
TMEM254-208ENST00000463209 HSP90AB2PQ58FF8 381 aa11.89□□□□□ -0.51
TMEM254-208ENST00000463209 CCDC125Q86Z20 511 aa11.89□□□□□ -0.51
TMEM254-208ENST00000463209 MARCH10Q8NA82 808 aaPredicted RBP11.89□□□□□ -0.51
TMEM254-208ENST00000463209 RTL1A6NKG5 1358 aa11.89□□□□□ -0.51
TMEM254-208ENST00000463209 SHANK3Q9BYB0 1731 aa11.89□□□□□ -0.51
TMEM254-208ENST00000463209 OVOS2A0A0G2JMS6 1433 aa11.88□□□□□ -0.51
TMEM254-208ENST00000463209 MEGF6O75095 1541 aa11.88□□□□□ -0.51
TMEM254-208ENST00000463209 FAM196AQ6ZSG2 479 aa11.88□□□□□ -0.51
TMEM254-208ENST00000463209 FLT4P35916 1363 aa11.87□□□□□ -0.51
TMEM254-208ENST00000463209 WASHC2AQ641Q2 1341 aa11.86□□□□□ -0.51
TMEM254-208ENST00000463209 APBA3O96018 575 aa11.86□□□□□ -0.51
TMEM254-208ENST00000463209 IL2RBP14784 551 aa11.86□□□□□ -0.51
TMEM254-208ENST00000463209 BAG6P46379 1132 aa11.86□□□□□ -0.51
TMEM254-208ENST00000463209 EZH2Q15910 746 aaKnown RBP11.86□□□□□ -0.51
TMEM254-208ENST00000463209 NBPF6Q5VWK0 638 aa11.86□□□□□ -0.51
TMEM254-208ENST00000463209 NBPF4Q96M43 638 aa11.86□□□□□ -0.51
TMEM254-208ENST00000463209 RREB1Q92766 1687 aa11.86□□□□□ -0.51
TMEM254-208ENST00000463209 NUP188Q5SRE5 1749 aa11.86□□□□□ -0.51
TMEM254-208ENST00000463209 SMG6Q86US8 1419 aaKnown RBP11.86□□□□□ -0.51
TMEM254-208ENST00000463209 EXOC5O00471 708 aa11.85□□□□□ -0.51
TMEM254-208ENST00000463209 DOT1LQ8TEK3 1739 aa11.85□□□□□ -0.51
TMEM254-208ENST00000463209 NHSQ6T4R5 1651 aa11.84□□□□□ -0.51
TMEM254-208ENST00000463209 INSRP06213 1382 aa11.84□□□□□ -0.51
TMEM254-208ENST00000463209 PSDA5PKW4 1024 aaPredicted RBP11.84□□□□□ -0.51
TMEM254-208ENST00000463209 ACSBG1Q96GR2 724 aa11.84□□□□□ -0.51
TMEM254-208ENST00000463209 CDCA7Q9BWT1 371 aaPredicted RBP11.84□□□□□ -0.51
TMEM254-208ENST00000463209 POLKQ9UBT6 870 aa11.84□□□□□ -0.51
TMEM254-208ENST00000463209 KCNQ2O43526 872 aa11.83□□□□□ -0.52
TMEM254-208ENST00000463209 DDX54Q8TDD1 881 aaKnown RBP11.83□□□□□ -0.52
TMEM254-208ENST00000463209 KNSTRNQ9Y448 316 aa11.83□□□□□ -0.52
TMEM254-208ENST00000463209 CC2D1BQ5T0F9 858 aaKnown RBP11.82□□□□□ -0.52
TMEM254-208ENST00000463209 MORC1Q86VD1 984 aa11.82□□□□□ -0.52
TMEM254-208ENST00000463209 CAMKK2Q96RR4 588 aa11.82□□□□□ -0.52
TMEM254-208ENST00000463209 BTAF1O14981 1849 aa11.81□□□□□ -0.52
Retrieved 100 of 20,778 RNA–protein pairs in 18.7 ms