RNA–Protein interactions for RNA: ENST00000463011.5

GPNMB-205, Transcript of glycoprotein nmb, humanhuman

TSL 3

Gene GPNMB, Length 378 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GPNMB-205ENST00000463011 CCNYL3P0C7X3 344 aa6.23□□□□□ -1.41
GPNMB-205ENST00000463011 ATP2B4P23634 1241 aa6.23□□□□□ -1.41
GPNMB-205ENST00000463011 SCNN1AP37088 669 aa6.23□□□□□ -1.41
GPNMB-205ENST00000463011 SERPINB4P48594 390 aa6.23□□□□□ -1.41
GPNMB-205ENST00000463011 MCCD1P59942 119 aaPredicted RBP6.23□□□□□ -1.41
GPNMB-205ENST00000463011 ARMC2Q8NEN0 867 aa6.23□□□□□ -1.41
GPNMB-205ENST00000463011 NUDT12Q9BQG2 462 aa6.23□□□□□ -1.41
GPNMB-205ENST00000463011 HPS5Q9UPZ3 1129 aa6.23□□□□□ -1.41
GPNMB-205ENST00000463011 GPSM3Q9Y4H4 160 aa6.23□□□□□ -1.41
GPNMB-205ENST00000463011 RBM47A0AV96 593 aaKnown RBP6.22□□□□□ -1.41
GPNMB-205ENST00000463011 SOWAHDA6NJG2 315 aa6.22□□□□□ -1.41
GPNMB-205ENST00000463011 EML3Q32P44 896 aa6.22□□□□□ -1.41
GPNMB-205ENST00000463011 ANKK1Q8NFD2 765 aa6.22□□□□□ -1.41
GPNMB-205ENST00000463011 ADAM32Q8TC27 787 aa6.22□□□□□ -1.41
GPNMB-205ENST00000463011 ZNF592Q92610 1267 aa6.22□□□□□ -1.41
GPNMB-205ENST00000463011 ZNF594Q96JF6 807 aaPredicted RBP6.22□□□□□ -1.41
GPNMB-205ENST00000463011 GOLGA8CPA6NN73 597 aa6.21□□□□□ -1.42
GPNMB-205ENST00000463011 BCAMP50895 628 aa6.21□□□□□ -1.42
GPNMB-205ENST00000463011 CLDN10P78369 228 aa6.21□□□□□ -1.42
GPNMB-205ENST00000463011 MAP7D1Q3KQU3 841 aa6.21□□□□□ -1.42
GPNMB-205ENST00000463011 DNAJC14Q6Y2X3 702 aaPredicted RBP6.21□□□□□ -1.42
GPNMB-205ENST00000463011 FAM160A2Q8N612 972 aaPredicted RBP6.21□□□□□ -1.42
GPNMB-205ENST00000463011 GPKOWQ92917 476 aaPredicted RBP eCLIP6.21□□□□□ -1.42
GPNMB-205ENST00000463011 ARHGAP9Q9BRR9 750 aa6.21□□□□□ -1.42
GPNMB-205ENST00000463011 DNAAF2Q9NVR5 837 aaKnown RBP6.21□□□□□ -1.42
GPNMB-205ENST00000463011 BIN2Q9UBW5 565 aaPredicted RBP6.21□□□□□ -1.42
GPNMB-205ENST00000463011 SOWAHBA6NEL2 793 aa6.2□□□□□ -1.42
GPNMB-205ENST00000463011 DXOO77932 396 aaKnown RBP6.2□□□□□ -1.42
GPNMB-205ENST00000463011 SWI5Q1ZZU3 235 aa6.2□□□□□ -1.42
GPNMB-205ENST00000463011 NBPF14Q5TI25 921 aa6.2□□□□□ -1.42
GPNMB-205ENST00000463011 TRAF7Q6Q0C0 670 aa6.2□□□□□ -1.42
GPNMB-205ENST00000463011 ADGRD1Q6QNK2 874 aa6.2□□□□□ -1.42
GPNMB-205ENST00000463011 ZBTB33Q86T24 672 aa6.2□□□□□ -1.42
GPNMB-205ENST00000463011 TRIM50Q86XT4 487 aa6.2□□□□□ -1.42
GPNMB-205ENST00000463011 TSR3Q9UJK0 312 aaKnown RBP6.2□□□□□ -1.42
GPNMB-205ENST00000463011 CHIC2Q9UKJ5 165 aa6.2□□□□□ -1.42
GPNMB-205ENST00000463011 NOD1Q9Y239 953 aa6.2□□□□□ -1.42
GPNMB-205ENST00000463011 PRMT3O60678 531 aa6.19□□□□□ -1.42
GPNMB-205ENST00000463011 ERCC3P19447 782 aa6.19□□□□□ -1.42
GPNMB-205ENST00000463011 ATP1A2P50993 1020 aa6.19□□□□□ -1.42
GPNMB-205ENST00000463011 MARSP56192 900 aaKnown RBP6.19□□□□□ -1.42
GPNMB-205ENST00000463011 MSS51Q4VC12 460 aa6.19□□□□□ -1.42
GPNMB-205ENST00000463011 NOM1Q5C9Z4 860 aaKnown RBP6.19□□□□□ -1.42
GPNMB-205ENST00000463011 DZIP3Q86Y13 1208 aaKnown RBP6.19□□□□□ -1.42
GPNMB-205ENST00000463011 STAC3Q96MF2 364 aa6.19□□□□□ -1.42
GPNMB-205ENST00000463011 SPSB2Q99619 263 aa6.19□□□□□ -1.42
GPNMB-205ENST00000463011 PRDM9Q9NQV7 894 aa6.19□□□□□ -1.42
GPNMB-205ENST00000463011 ZBTB7BO15156 539 aaPredicted RBP6.18□□□□□ -1.42
GPNMB-205ENST00000463011 OXLD1Q5BKU9 147 aa6.18□□□□□ -1.42
GPNMB-205ENST00000463011 LARGE2Q8N3Y3 721 aa6.18□□□□□ -1.42
GPNMB-205ENST00000463011 PRIMPOLQ96LW4 560 aa6.18□□□□□ -1.42
GPNMB-205ENST00000463011 CCDC85AQ96PX6 553 aaPredicted RBP6.18□□□□□ -1.42
GPNMB-205ENST00000463011 DOLKQ9UPQ8 538 aa6.18□□□□□ -1.42
GPNMB-205ENST00000463011 KIAA1024Q9UPX6 916 aa6.18□□□□□ -1.42
GPNMB-205ENST00000463011 HRO43593 1189 aa6.17□□□□□ -1.42
GPNMB-205ENST00000463011 GIGYF1O75420 1035 aaPredicted RBP6.17□□□□□ -1.42
GPNMB-205ENST00000463011 DKK1O94907 266 aa6.17□□□□□ -1.42
GPNMB-205ENST00000463011 MMP16P51512 607 aa6.17□□□□□ -1.42
GPNMB-205ENST00000463011 COPS2P61201 443 aa6.17□□□□□ -1.42
GPNMB-205ENST00000463011 PTCRAQ6ISU1 281 aaPredicted RBP6.17□□□□□ -1.42
GPNMB-205ENST00000463011 CCDC24Q8N4L8 307 aa6.17□□□□□ -1.42
GPNMB-205ENST00000463011 MRRFQ96E11 262 aaKnown RBP6.17□□□□□ -1.42
GPNMB-205ENST00000463011 BCL2L13Q9BXK5 485 aa6.17□□□□□ -1.42
GPNMB-205ENST00000463011 CARD14Q9BXL6 1004 aa6.17□□□□□ -1.42
GPNMB-205ENST00000463011 KIAA1522Q9P206 1035 aaPredicted RBP6.17□□□□□ -1.42
GPNMB-205ENST00000463011 SHROOM4Q9ULL8 1493 aa6.16□□□□□ -1.42
GPNMB-205ENST00000463011 MAGEB6P1A0A0J9YX57 407 aa6.16□□□□□ -1.42
GPNMB-205ENST00000463011 SFI1A8K8P3 1242 aa6.16□□□□□ -1.42
GPNMB-205ENST00000463011 LGR5O75473 907 aa6.16□□□□□ -1.42
GPNMB-205ENST00000463011 ABL1P00519 1130 aa6.16□□□□□ -1.42
GPNMB-205ENST00000463011 ZNF16P17020 682 aaPredicted RBP6.16□□□□□ -1.42
GPNMB-205ENST00000463011 SEC13P55735 322 aa6.16□□□□□ -1.42
GPNMB-205ENST00000463011 GTF2IP78347 998 aa6.16□□□□□ -1.42
GPNMB-205ENST00000463011 LSM11P83369 360 aaKnown RBP eCLIP6.16□□□□□ -1.42
GPNMB-205ENST00000463011 CCDC102BQ68D86 513 aa6.16□□□□□ -1.42
GPNMB-205ENST00000463011 SH3BP5LQ7L8J4 393 aa6.16□□□□□ -1.42
GPNMB-205ENST00000463011 WNT2BQ93097 391 aa6.16□□□□□ -1.42
GPNMB-205ENST00000463011 SIRT1Q96EB6 747 aa6.16□□□□□ -1.42
GPNMB-205ENST00000463011 UNC93B1Q9H1C4 597 aa6.16□□□□□ -1.42
GPNMB-205ENST00000463011 ANO2Q9NQ90 1003 aa6.16□□□□□ -1.42
GPNMB-205ENST00000463011 RBM19Q9Y4C8 960 aaKnown RBP6.16□□□□□ -1.42
GPNMB-205ENST00000463011 ANKRD33BA6NCL7 494 aa6.15□□□□□ -1.42
GPNMB-205ENST00000463011 SIX5Q8N196 739 aa6.15□□□□□ -1.42
GPNMB-205ENST00000463011 C1orf216Q8TAB5 229 aa6.15□□□□□ -1.42
GPNMB-205ENST00000463011 GIPC2Q8TF65 315 aa6.15□□□□□ -1.42
GPNMB-205ENST00000463011 WBP1LQ9NX94 342 aa6.15□□□□□ -1.42
GPNMB-205ENST00000463011 USP35Q9P2H5 1018 aa6.15□□□□□ -1.42
GPNMB-205ENST00000463011 PSME1Q06323 249 aa6.14□□□□□ -1.43
GPNMB-205ENST00000463011 ZNF211Q13398 564 aaPredicted RBP6.14□□□□□ -1.43
GPNMB-205ENST00000463011 AGERQ15109 404 aa6.14□□□□□ -1.43
GPNMB-205ENST00000463011 OCLNQ16625 522 aa6.14□□□□□ -1.43
GPNMB-205ENST00000463011 TAS1R3Q7RTX0 852 aa6.14□□□□□ -1.43
GPNMB-205ENST00000463011 TPCN2Q8NHX9 752 aa6.14□□□□□ -1.43
GPNMB-205ENST00000463011 IGSF5Q9NSI5 407 aa6.14□□□□□ -1.43
GPNMB-205ENST00000463011 CXXC1Q9P0U4 656 aaPredicted RBP6.14□□□□□ -1.43
GPNMB-205ENST00000463011 ANKRD13DQ6ZTN6 518 aa6.13□□□□□ -1.43
GPNMB-205ENST00000463011 BAP1Q92560 729 aa6.13□□□□□ -1.43
GPNMB-205ENST00000463011 HINFPQ9BQA5 517 aa6.13□□□□□ -1.43
GPNMB-205ENST00000463011 PCDHGA11Q9Y5H2 935 aa6.13□□□□□ -1.43
GPNMB-205ENST00000463011 H3BRB1 525 aa6.12□□□□□ -1.43
Retrieved 100 of 20,778 RNA–protein pairs in 16.3 ms