RNA–Protein interactions for RNA: ENST00000463004.5

RBM39-223, Transcript of RNA binding motif protein 39, humanhuman

TSL 5

Gene RBM39, Length 4,580 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RBM39-223ENST00000463004 KDM5AP29375 1690 aaKnown RBP14.47□□□□□ -0.09
RBM39-223ENST00000463004 PLA2R1Q13018 1463 aa14.47□□□□□ -0.09
RBM39-223ENST00000463004 SOS1Q07889 1333 aaPredicted RBP14.47□□□□□ -0.09
RBM39-223ENST00000463004 RPAP2Q8IXW5 612 aaPredicted RBP14.47□□□□□ -0.09
RBM39-223ENST00000463004 SLC4A2P04920 1241 aa14.47□□□□□ -0.09
RBM39-223ENST00000463004 INTS3Q68E01 1043 aaKnown RBP14.46□□□□□ -0.1
RBM39-223ENST00000463004 SRCIN1Q9C0H9 1055 aa14.46□□□□□ -0.1
RBM39-223ENST00000463004 KDM5CP41229 1560 aa14.45□□□□□ -0.1
RBM39-223ENST00000463004 KIF6Q6ZMV9 814 aa14.45□□□□□ -0.1
RBM39-223ENST00000463004 FAM135BQ49AJ0 1406 aa14.45□□□□□ -0.1
RBM39-223ENST00000463004 BTBD11A6QL63 1104 aa14.45□□□□□ -0.1
RBM39-223ENST00000463004 RARSP54136 660 aaKnown RBP14.44□□□□□ -0.1
RBM39-223ENST00000463004 DUSP27Q5VZP5 1158 aa14.44□□□□□ -0.1
RBM39-223ENST00000463004 STRN4Q9NRL3 753 aa14.44□□□□□ -0.1
RBM39-223ENST00000463004 DIAPH3Q9NSV4 1193 aa14.44□□□□□ -0.1
RBM39-223ENST00000463004 INO80Q9ULG1 1556 aaPredicted RBP14.44□□□□□ -0.1
RBM39-223ENST00000463004 LRRIQ1Q96JM4 1722 aa14.44□□□□□ -0.1
RBM39-223ENST00000463004 CARD14Q9BXL6 1004 aa14.44□□□□□ -0.1
RBM39-223ENST00000463004 AGLP35573 1532 aa14.44□□□□□ -0.1
RBM39-223ENST00000463004 PTPRCP08575 1304 aa14.44□□□□□ -0.1
RBM39-223ENST00000463004 ZC3H6P61129 1189 aaKnown RBP14.44□□□□□ -0.1
RBM39-223ENST00000463004 SYTL4Q96C24 671 aaPredicted RBP14.44□□□□□ -0.1
RBM39-223ENST00000463004 FANCIQ9NVI1 1328 aa14.44□□□□□ -0.1
RBM39-223ENST00000463004 BCAR3O75815 825 aa14.43□□□□□ -0.1
RBM39-223ENST00000463004 ARHGAP45Q92619 1136 aa14.43□□□□□ -0.1
RBM39-223ENST00000463004 POLKQ9UBT6 870 aa14.43□□□□□ -0.1
RBM39-223ENST00000463004 CSPP1Q1MSJ5 1256 aa14.42□□□□□ -0.1
RBM39-223ENST00000463004 CLASRPQ8N2M8 674 aaKnown RBP14.42□□□□□ -0.1
RBM39-223ENST00000463004 NECTIN2Q92692 538 aa14.42□□□□□ -0.1
RBM39-223ENST00000463004 SYNMO15061 1565 aa14.42□□□□□ -0.1
RBM39-223ENST00000463004 GOLGA6L4A6NEF3 574 aa14.42□□□□□ -0.1
RBM39-223ENST00000463004 HIP1O00291 1037 aa14.42□□□□□ -0.1
RBM39-223ENST00000463004 UGGT1Q9NYU2 1555 aa14.42□□□□□ -0.1
RBM39-223ENST00000463004 SPHKAPQ2M3C7 1700 aa14.42□□□□□ -0.1
RBM39-223ENST00000463004 RNF17Q9BXT8 1623 aaKnown RBP14.41□□□□□ -0.1
RBM39-223ENST00000463004 TSPOAP1O95153 1857 aa14.41□□□□□ -0.1
RBM39-223ENST00000463004 CDC45O75419 566 aa14.41□□□□□ -0.1
RBM39-223ENST00000463004 BABAM1Q9NWV8 329 aa14.41□□□□□ -0.1
RBM39-223ENST00000463004 RNF20Q5VTR2 975 aa14.41□□□□□ -0.1
RBM39-223ENST00000463004 TEX13AQ9BXU3 409 aaPredicted RBP14.41□□□□□ -0.1
RBM39-223ENST00000463004 ATP7BP35670 1465 aa14.4□□□□□ -0.1
RBM39-223ENST00000463004 RIMBP3CA6NJZ7 1639 aa14.4□□□□□ -0.1
RBM39-223ENST00000463004 RIMBP3BA6NNM3 1639 aa14.4□□□□□ -0.1
RBM39-223ENST00000463004 RIMBP3Q9UFD9 1639 aa14.4□□□□□ -0.1
RBM39-223ENST00000463004 IFNL2Q8IZJ0 200 aa14.4□□□□□ -0.1
RBM39-223ENST00000463004 ZKSCAN1P17029 563 aaPredicted RBP14.4□□□□□ -0.1
RBM39-223ENST00000463004 RILPL2Q969X0 211 aa14.4□□□□□ -0.1
RBM39-223ENST00000463004 XPCQ01831 940 aaPredicted RBP14.4□□□□□ -0.1
RBM39-223ENST00000463004 MAP3K4Q9Y6R4 1608 aa14.39□□□□□ -0.11
RBM39-223ENST00000463004 NAP1L2Q9ULW6 460 aaPredicted RBP14.39□□□□□ -0.11
RBM39-223ENST00000463004 SBNO1A3KN83 1393 aa14.39□□□□□ -0.11
RBM39-223ENST00000463004 TOM1O60784 492 aa14.39□□□□□ -0.11
RBM39-223ENST00000463004 STARD3NLO95772 234 aa14.38□□□□□ -0.11
RBM39-223ENST00000463004 ANKRD24Q8TF21 1146 aa14.38□□□□□ -0.11
RBM39-223ENST00000463004 LNPKQ9C0E8 428 aa14.38□□□□□ -0.11
RBM39-223ENST00000463004 AIMP1Q12904 312 aaKnown RBP14.38□□□□□ -0.11
RBM39-223ENST00000463004 HYPKQ9NX55 129 aa14.37□□□□□ -0.11
RBM39-223ENST00000463004 LARP1Q6PKG0 1096 aaKnown RBP14.37□□□□□ -0.11
RBM39-223ENST00000463004 SSH1Q8WYL5 1049 aa14.37□□□□□ -0.11
RBM39-223ENST00000463004 SYAP1Q96A49 352 aaPredicted RBP14.37□□□□□ -0.11
RBM39-223ENST00000463004 USP35Q9P2H5 1018 aa14.37□□□□□ -0.11
RBM39-223ENST00000463004 L1TD1Q5T7N2 865 aaKnown RBP14.37□□□□□ -0.11
RBM39-223ENST00000463004 TRIM44Q96DX7 344 aaPredicted RBP14.37□□□□□ -0.11
RBM39-223ENST00000463004 FRAT2O75474 233 aaPredicted RBP14.37□□□□□ -0.11
RBM39-223ENST00000463004 DBF4Q9UBU7 674 aaPredicted RBP14.37□□□□□ -0.11
RBM39-223ENST00000463004 CLTCL1P53675 1640 aa14.37□□□□□ -0.11
RBM39-223ENST00000463004 NCKAP5LQ9HCH0 1330 aa14.37□□□□□ -0.11
RBM39-223ENST00000463004 ZC3H13Q5T200 1668 aaKnown RBP14.36□□□□□ -0.11
RBM39-223ENST00000463004 CNTROBQ8N137 903 aa14.36□□□□□ -0.11
RBM39-223ENST00000463004 IP6K1Q92551 441 aa14.36□□□□□ -0.11
RBM39-223ENST00000463004 PDZRN3Q9UPQ7 1066 aa14.36□□□□□ -0.11
RBM39-223ENST00000463004 G3V3G9 751 aa14.36□□□□□ -0.11
RBM39-223ENST00000463004 SURF6O75683 361 aaKnown RBP14.36□□□□□ -0.11
RBM39-223ENST00000463004 EIF4A2Q14240 407 aaKnown RBP14.36□□□□□ -0.11
RBM39-223ENST00000463004 DCAF8Q5TAQ9 597 aa14.36□□□□□ -0.11
RBM39-223ENST00000463004 DDX54Q8TDD1 881 aaKnown RBP14.36□□□□□ -0.11
RBM39-223ENST00000463004 PLEKHH1Q9ULM0 1364 aa14.36□□□□□ -0.11
RBM39-223ENST00000463004 ATP6V1DQ9Y5K8 247 aa14.36□□□□□ -0.11
RBM39-223ENST00000463004 DIP2CQ9Y2E4 1556 aa14.35□□□□□ -0.11
RBM39-223ENST00000463004 ARHGEF10O15013 1369 aa14.35□□□□□ -0.11
RBM39-223ENST00000463004 LTKP29376 864 aa14.35□□□□□ -0.11
RBM39-223ENST00000463004 MCM10Q7L590 875 aa14.35□□□□□ -0.11
RBM39-223ENST00000463004 ADGRB3O60242 1522 aa14.35□□□□□ -0.11
RBM39-223ENST00000463004 ZMYM4Q5VZL5 1548 aa14.35□□□□□ -0.11
RBM39-223ENST00000463004 AKAP4Q5JQC9 854 aa14.35□□□□□ -0.11
RBM39-223ENST00000463004 FMNL2Q96PY5 1086 aa14.35□□□□□ -0.11
RBM39-223ENST00000463004 RBM42Q9BTD8 480 aaKnown RBP14.35□□□□□ -0.11
RBM39-223ENST00000463004 SETBP1Q9Y6X0 1596 aa14.35□□□□□ -0.11
RBM39-223ENST00000463004 CFAP65Q6ZU64 1925 aaKnown RBP14.35□□□□□ -0.11
RBM39-223ENST00000463004 HSP90AB3PQ58FF7 597 aa14.34□□□□□ -0.11
RBM39-223ENST00000463004 CCDC34Q96HJ3 373 aa14.34□□□□□ -0.11
RBM39-223ENST00000463004 TMOD3Q9NYL9 352 aa14.34□□□□□ -0.11
RBM39-223ENST00000463004 AATKQ6ZMQ8 1374 aa14.34□□□□□ -0.11
RBM39-223ENST00000463004 RAB11FIP3O75154 756 aa14.34□□□□□ -0.11
RBM39-223ENST00000463004 LAMC1P11047 1609 aa14.34□□□□□ -0.11
RBM39-223ENST00000463004 HSP90AB2PQ58FF8 381 aa14.34□□□□□ -0.11
RBM39-223ENST00000463004 LRRCC1Q9C099 1032 aa14.34□□□□□ -0.11
RBM39-223ENST00000463004 A2ML1A8K2U0 1454 aa14.34□□□□□ -0.11
RBM39-223ENST00000463004 NPHP4O75161 1426 aaPredicted RBP14.34□□□□□ -0.11
RBM39-223ENST00000463004 NOL10Q9BSC4 688 aaKnown RBP14.34□□□□□ -0.11
Retrieved 100 of 20,778 RNA–protein pairs in 62.8 ms