RNA–Protein interactions for RNA: ENST00000462710.5

SRRM1-205, Transcript of serine and arginine repetitive matrix 1, humanhuman

TSL 5

Gene SRRM1, Length 2,624 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRRM1-205ENST00000462710 WDR17Q8IZU2 1322 aa13.21□□□□□ -0.29
SRRM1-205ENST00000462710 EP400Q96L91 3159 aa13.21□□□□□ -0.29
SRRM1-205ENST00000462710 NFAT5O94916 1531 aa13.21□□□□□ -0.29
SRRM1-205ENST00000462710 TNS2Q63HR2 1409 aa13.21□□□□□ -0.3
SRRM1-205ENST00000462710 ZC3H6P61129 1189 aaKnown RBP13.21□□□□□ -0.3
SRRM1-205ENST00000462710 ABTB2Q8N961 1025 aa13.21□□□□□ -0.3
SRRM1-205ENST00000462710 PPP1R1BQ9UD71 204 aaPredicted RBP13.21□□□□□ -0.3
SRRM1-205ENST00000462710 MON2Q7Z3U7 1717 aa13.2□□□□□ -0.3
SRRM1-205ENST00000462710 TTC21AQ8NDW8 1320 aa13.2□□□□□ -0.3
SRRM1-205ENST00000462710 FAM208AQ9UK61 1670 aaKnown RBP13.2□□□□□ -0.3
SRRM1-205ENST00000462710 CARD10Q9BWT7 1032 aa13.2□□□□□ -0.3
SRRM1-205ENST00000462710 PTGER2P43116 358 aa13.19□□□□□ -0.3
SRRM1-205ENST00000462710 KCNH5Q8NCM2 988 aa13.19□□□□□ -0.3
SRRM1-205ENST00000462710 USP31Q70CQ4 1352 aa13.18□□□□□ -0.3
SRRM1-205ENST00000462710 DDB1Q16531 1140 aa13.18□□□□□ -0.3
SRRM1-205ENST00000462710 SGIP1Q9BQI5 828 aa13.18□□□□□ -0.3
SRRM1-205ENST00000462710 ZNF692Q9BU19 519 aaPredicted RBP13.18□□□□□ -0.3
SRRM1-205ENST00000462710 CENPJQ9HC77 1338 aaPredicted RBP13.17□□□□□ -0.3
SRRM1-205ENST00000462710 MTFR1LQ9H019 292 aa13.17□□□□□ -0.3
SRRM1-205ENST00000462710 STK32BQ9NY57 414 aa13.17□□□□□ -0.3
SRRM1-205ENST00000462710 ARHGEF25Q86VW2 580 aa13.16□□□□□ -0.3
SRRM1-205ENST00000462710 RGPD5Q99666 1765 aa13.16□□□□□ -0.3
SRRM1-205ENST00000462710 ANO8Q9HCE9 1232 aaPredicted RBP13.15□□□□□ -0.3
SRRM1-205ENST00000462710 SBNO2Q9Y2G9 1366 aa13.15□□□□□ -0.3
SRRM1-205ENST00000462710 SLC15A2Q16348 729 aa13.14□□□□□ -0.31
SRRM1-205ENST00000462710 PROM2Q8N271 834 aa13.14□□□□□ -0.31
SRRM1-205ENST00000462710 MARCH10Q8NA82 808 aaPredicted RBP13.14□□□□□ -0.31
SRRM1-205ENST00000462710 SLC16A10Q8TF71 515 aa13.14□□□□□ -0.31
SRRM1-205ENST00000462710 HMGB2P26583 209 aaKnown RBP13.13□□□□□ -0.31
SRRM1-205ENST00000462710 BTAF1O14981 1849 aa13.13□□□□□ -0.31
SRRM1-205ENST00000462710 KDM2AQ9Y2K7 1162 aa13.13□□□□□ -0.31
SRRM1-205ENST00000462710 PLEKHG5O94827 1062 aa13.12□□□□□ -0.31
SRRM1-205ENST00000462710 TXNRD1Q16881 649 aa13.12□□□□□ -0.31
SRRM1-205ENST00000462710 EVC2Q86UK5 1308 aa13.11□□□□□ -0.31
SRRM1-205ENST00000462710 LY75O60449 1722 aa13.11□□□□□ -0.31
SRRM1-205ENST00000462710 ZNF784Q8NCA9 323 aaPredicted RBP13.11□□□□□ -0.31
SRRM1-205ENST00000462710 PUS7Q96PZ0 661 aaKnown RBP13.11□□□□□ -0.31
SRRM1-205ENST00000462710 TTC21BQ7Z4L5 1316 aa13.11□□□□□ -0.31
SRRM1-205ENST00000462710 TOM1L2Q6ZVM7 507 aa13.1□□□□□ -0.31
SRRM1-205ENST00000462710 NLRP6P59044 892 aa13.1□□□□□ -0.31
SRRM1-205ENST00000462710 USP35Q9P2H5 1018 aa13.1□□□□□ -0.31
SRRM1-205ENST00000462710 EXOC5O00471 708 aa13.09□□□□□ -0.31
SRRM1-205ENST00000462710 NUTM2GQ5VZR2 741 aa13.09□□□□□ -0.31
SRRM1-205ENST00000462710 SYT17Q9BSW7 474 aa13.09□□□□□ -0.31
SRRM1-205ENST00000462710 SRPK2P78362 688 aaKnown RBP13.09□□□□□ -0.31
SRRM1-205ENST00000462710 SLC27A3Q5K4L6 730 aa13.09□□□□□ -0.31
SRRM1-205ENST00000462710 LTN1O94822 1766 aa13.08□□□□□ -0.31
SRRM1-205ENST00000462710 C1QTNF8P60827 252 aa13.08□□□□□ -0.32
SRRM1-205ENST00000462710 TUBGCP6Q96RT7 1819 aa13.07□□□□□ -0.32
SRRM1-205ENST00000462710 SHANK3Q9BYB0 1731 aa13.07□□□□□ -0.32
SRRM1-205ENST00000462710 CABP1Q9NZU7 370 aa13.07□□□□□ -0.32
SRRM1-205ENST00000462710 AXIN2Q9Y2T1 843 aa13.07□□□□□ -0.32
SRRM1-205ENST00000462710 ARXQ96QS3 562 aa13.06□□□□□ -0.32
SRRM1-205ENST00000462710 AKT1S1Q96B36 256 aa13.06□□□□□ -0.32
SRRM1-205ENST00000462710 FHDC1Q9C0D6 1143 aaPredicted RBP13.06□□□□□ -0.32
SRRM1-205ENST00000462710 CABP2Q9NPB3 220 aa13.05□□□□□ -0.32
SRRM1-205ENST00000462710 NBPF1Q3BBV0 1214 aa13.04□□□□□ -0.32
SRRM1-205ENST00000462710 ERBB3P21860 1342 aa13.03□□□□□ -0.32
SRRM1-205ENST00000462710 CD163L1Q9NR16 1453 aa13.03□□□□□ -0.32
SRRM1-205ENST00000462710 ZBTB7AO95365 584 aa13.03□□□□□ -0.32
SRRM1-205ENST00000462710 EDC4Q6P2E9 1401 aaKnown RBP13.02□□□□□ -0.32
SRRM1-205ENST00000462710 IL2RBP14784 551 aa13.02□□□□□ -0.33
SRRM1-205ENST00000462710 PTF1AQ7RTS3 328 aa13.01□□□□□ -0.33
SRRM1-205ENST00000462710 KTN1Q86UP2 1357 aaKnown RBP13.01□□□□□ -0.33
SRRM1-205ENST00000462710 IFFO2Q5TF58 517 aa13.01□□□□□ -0.33
SRRM1-205ENST00000462710 CICQ96RK0 1608 aaPredicted RBP13□□□□□ -0.33
SRRM1-205ENST00000462710 ATF5Q9Y2D1 282 aaPredicted RBP13□□□□□ -0.33
SRRM1-205ENST00000462710 ANKRD36BQ8N2N9 1353 aa12.99□□□□□ -0.33
SRRM1-205ENST00000462710 GRIN3BO60391 1043 aa12.99□□□□□ -0.33
SRRM1-205ENST00000462710 PDGFDQ9GZP0 370 aaPredicted RBP12.99□□□□□ -0.33
SRRM1-205ENST00000462710 DOT1LQ8TEK3 1739 aa12.99□□□□□ -0.33
SRRM1-205ENST00000462710 POLD1P28340 1107 aa12.99□□□□□ -0.33
SRRM1-205ENST00000462710 RTL1A6NKG5 1358 aa12.98□□□□□ -0.33
SRRM1-205ENST00000462710 NSD2O96028 1365 aa12.98□□□□□ -0.33
SRRM1-205ENST00000462710 CSB-PGBD3P0DP91 1061 aa12.98□□□□□ -0.33
SRRM1-205ENST00000462710 CGNL1Q0VF96 1302 aa12.98□□□□□ -0.33
SRRM1-205ENST00000462710 SLC24A1O60721 1099 aa12.97□□□□□ -0.33
SRRM1-205ENST00000462710 ADCY9O60503 1353 aa12.97□□□□□ -0.33
SRRM1-205ENST00000462710 PLEKHG2Q9H7P9 1386 aa12.97□□□□□ -0.33
SRRM1-205ENST00000462710 PNPLA7Q6ZV29 1317 aa12.97□□□□□ -0.33
SRRM1-205ENST00000462710 SENP3-EIF4A1A0A087X0R7 540 aa12.96□□□□□ -0.33
SRRM1-205ENST00000462710 ZNF827Q17R98 1081 aa12.96□□□□□ -0.33
SRRM1-205ENST00000462710 C5P01031 1676 aa12.96□□□□□ -0.33
SRRM1-205ENST00000462710 GIGYF1O75420 1035 aaPredicted RBP12.96□□□□□ -0.33
SRRM1-205ENST00000462710 IP6K1Q92551 441 aa12.96□□□□□ -0.33
SRRM1-205ENST00000462710 TAF1LQ8IZX4 1826 aa12.95□□□□□ -0.34
SRRM1-205ENST00000462710 KIF24Q5T7B8 1368 aa12.95□□□□□ -0.34
SRRM1-205ENST00000462710 NSD3Q9BZ95 1437 aa12.95□□□□□ -0.34
SRRM1-205ENST00000462710 FLAD1Q8NFF5 587 aa12.94□□□□□ -0.34
SRRM1-205ENST00000462710 ZNF831Q5JPB2 1677 aa12.94□□□□□ -0.34
SRRM1-205ENST00000462710 ANKRD24Q8TF21 1146 aa12.94□□□□□ -0.34
SRRM1-205ENST00000462710 LRRC4BQ9NT99 713 aa12.94□□□□□ -0.34
SRRM1-205ENST00000462710 ROCK2O75116 1388 aaKnown RBP12.94□□□□□ -0.34
SRRM1-205ENST00000462710 CD2APQ9Y5K6 639 aa12.93□□□□□ -0.34
SRRM1-205ENST00000462710 HDGFL2Q7Z4V5 671 aaPredicted RBP12.92□□□□□ -0.34
SRRM1-205ENST00000462710 PKD1L3Q7Z443 1732 aa12.92□□□□□ -0.34
SRRM1-205ENST00000462710 GPR162Q16538 588 aa12.92□□□□□ -0.34
SRRM1-205ENST00000462710 L3MBTL2Q969R5 705 aa12.92□□□□□ -0.34
SRRM1-205ENST00000462710 KIF13BQ9NQT8 1826 aa12.92□□□□□ -0.34
SRRM1-205ENST00000462710 NCAPD2Q15021 1401 aa12.91□□□□□ -0.34
Retrieved 100 of 20,778 RNA–protein pairs in 8.8 ms