RNA–Protein interactions for RNA: ENST00000462539.1

SREBF2-204, Transcript of sterol regulatory element binding transcription factor 2, humanhuman

TSL 2

Gene SREBF2, Length 796 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SREBF2-204ENST00000462539 RIMS2Q9UQ26 1411 aa9.33□□□□□ -0.92
SREBF2-204ENST00000462539 N4BP2Q86UW6 1770 aaPredicted RBP9.33□□□□□ -0.92
SREBF2-204ENST00000462539 IPO8O15397 1037 aaKnown RBP9.33□□□□□ -0.92
SREBF2-204ENST00000462539 NUCB1Q02818 461 aa9.33□□□□□ -0.92
SREBF2-204ENST00000462539 CDK19Q9BWU1 502 aa9.33□□□□□ -0.92
SREBF2-204ENST00000462539 ANO8Q9HCE9 1232 aaPredicted RBP9.33□□□□□ -0.92
SREBF2-204ENST00000462539 FCHSD2O94868 740 aa9.32□□□□□ -0.92
SREBF2-204ENST00000462539 MCM4P33991 863 aa9.32□□□□□ -0.92
SREBF2-204ENST00000462539 ZNF428Q96B54 188 aa9.32□□□□□ -0.92
SREBF2-204ENST00000462539 ZNF692Q9BU19 519 aaPredicted RBP9.32□□□□□ -0.92
SREBF2-204ENST00000462539 CHMP5Q9NZZ3 219 aa9.32□□□□□ -0.92
SREBF2-204ENST00000462539 TUBGCP6Q96RT7 1819 aa9.32□□□□□ -0.92
SREBF2-204ENST00000462539 PRKAR2BP31323 418 aa9.31□□□□□ -0.92
SREBF2-204ENST00000462539 RBM25P49756 843 aaKnown RBP9.31□□□□□ -0.92
SREBF2-204ENST00000462539 NFE2L2Q16236 605 aa9.31□□□□□ -0.92
SREBF2-204ENST00000462539 HSCBQ8IWL3 235 aa9.31□□□□□ -0.92
SREBF2-204ENST00000462539 MRPL50Q8N5N7 158 aaKnown RBP9.31□□□□□ -0.92
SREBF2-204ENST00000462539 PEAK1Q9H792 1746 aa9.31□□□□□ -0.92
SREBF2-204ENST00000462539 ABCC4O15439 1325 aa9.31□□□□□ -0.92
SREBF2-204ENST00000462539 RIMS1Q86UR5 1692 aaKnown RBP9.3□□□□□ -0.92
SREBF2-204ENST00000462539 AATKQ6ZMQ8 1374 aa9.3□□□□□ -0.92
SREBF2-204ENST00000462539 FSD2A1L4K1 749 aa9.3□□□□□ -0.92
SREBF2-204ENST00000462539 DDIT3P35638 169 aa9.3□□□□□ -0.92
SREBF2-204ENST00000462539 CHD1LQ86WJ1 897 aa9.3□□□□□ -0.92
SREBF2-204ENST00000462539 SNX21Q969T3 373 aa9.3□□□□□ -0.92
SREBF2-204ENST00000462539 TECPR2O15040 1411 aa9.3□□□□□ -0.92
SREBF2-204ENST00000462539 FAM208AQ9UK61 1670 aaKnown RBP9.29□□□□□ -0.92
SREBF2-204ENST00000462539 KIF24Q5T7B8 1368 aa9.29□□□□□ -0.92
SREBF2-204ENST00000462539 UBR1Q8IWV7 1749 aa9.29□□□□□ -0.92
SREBF2-204ENST00000462539 CALD1Q05682 793 aaKnown RBP9.29□□□□□ -0.92
SREBF2-204ENST00000462539 ARHGAP45Q92619 1136 aa9.29□□□□□ -0.92
SREBF2-204ENST00000462539 IFT57Q9NWB7 429 aa9.29□□□□□ -0.92
SREBF2-204ENST00000462539 RNF216Q9NWF9 866 aaPredicted RBP9.29□□□□□ -0.92
SREBF2-204ENST00000462539 CABP1Q9NZU7 370 aa9.29□□□□□ -0.92
SREBF2-204ENST00000462539 POLKQ9UBT6 870 aa9.29□□□□□ -0.92
SREBF2-204ENST00000462539 LRRC37A3O60309 1634 aa9.28□□□□□ -0.92
SREBF2-204ENST00000462539 ZNF853P0CG23 659 aa9.28□□□□□ -0.92
SREBF2-204ENST00000462539 BMP2KLQ5H9B9 411 aa9.28□□□□□ -0.92
SREBF2-204ENST00000462539 FBXO31Q5XUX0 539 aaPredicted RBP9.28□□□□□ -0.92
SREBF2-204ENST00000462539 SPRYD3Q8NCJ5 442 aa9.28□□□□□ -0.92
SREBF2-204ENST00000462539 GCC1Q96CN9 775 aa9.28□□□□□ -0.92
SREBF2-204ENST00000462539 LNPKQ9C0E8 428 aa9.28□□□□□ -0.92
SREBF2-204ENST00000462539 CHMP4BQ9H444 224 aaKnown RBP9.28□□□□□ -0.92
SREBF2-204ENST00000462539 SIPA1L2Q9P2F8 1722 aaPredicted RBP9.28□□□□□ -0.92
SREBF2-204ENST00000462539 DDX11L8A8MPP1 907 aa9.27□□□□□ -0.93
SREBF2-204ENST00000462539 VAMP4O75379 141 aa9.27□□□□□ -0.93
SREBF2-204ENST00000462539 IL13P35225 146 aa9.27□□□□□ -0.93
SREBF2-204ENST00000462539 GNAI1P63096 354 aa9.27□□□□□ -0.93
SREBF2-204ENST00000462539 MAPK8IP2Q13387 824 aaPredicted RBP9.27□□□□□ -0.93
SREBF2-204ENST00000462539 ZBTB4Q9P1Z0 1013 aaPredicted RBP9.27□□□□□ -0.93
SREBF2-204ENST00000462539 CIZ1Q9ULV3 898 aaPredicted RBP9.27□□□□□ -0.93
SREBF2-204ENST00000462539 RGS12O14924 1447 aa9.26□□□□□ -0.93
SREBF2-204ENST00000462539 ATP10DQ9P241 1426 aa9.26□□□□□ -0.93
SREBF2-204ENST00000462539 GOLGA6L3A6NEY3 463 aa9.26□□□□□ -0.93
SREBF2-204ENST00000462539 ZBTB7BO15156 539 aaPredicted RBP9.26□□□□□ -0.93
SREBF2-204ENST00000462539 LMOD3Q0VAK6 560 aa9.26□□□□□ -0.93
SREBF2-204ENST00000462539 SUGP2Q8IX01 1082 aaKnown RBP eCLIP9.26□□□□□ -0.93
SREBF2-204ENST00000462539 PHACTR3Q96KR7 559 aa9.26□□□□□ -0.93
SREBF2-204ENST00000462539 THUMPD2Q9BTF0 503 aaKnown RBP9.26□□□□□ -0.93
SREBF2-204ENST00000462539 MBIPQ9NS73 344 aa9.26□□□□□ -0.93
SREBF2-204ENST00000462539 EMILIN1Q9Y6C2 1016 aa9.26□□□□□ -0.93
SREBF2-204ENST00000462539 HMOX1P09601 288 aa9.25□□□□□ -0.93
SREBF2-204ENST00000462539 TSPYL6Q8N831 410 aa9.25□□□□□ -0.93
SREBF2-204ENST00000462539 KIF2CQ99661 725 aa9.25□□□□□ -0.93
SREBF2-204ENST00000462539 C1orf115Q9H7X2 142 aa9.25□□□□□ -0.93
SREBF2-204ENST00000462539 RRAGDQ9NQL2 400 aaPredicted RBP9.25□□□□□ -0.93
SREBF2-204ENST00000462539 XRN1Q8IZH2 1706 aaKnown RBP9.25□□□□□ -0.93
SREBF2-204ENST00000462539 AK9Q5TCS8 1911 aa9.25□□□□□ -0.93
SREBF2-204ENST00000462539 KIF13AQ9H1H9 1805 aa9.24□□□□□ -0.93
SREBF2-204ENST00000462539 OVOS2A0A0J9YW53 1432 aa9.24□□□□□ -0.93
SREBF2-204ENST00000462539 OVOS2Q6IE36 1432 aa9.24□□□□□ -0.93
SREBF2-204ENST00000462539 USP54Q70EL1 1684 aa9.24□□□□□ -0.93
SREBF2-204ENST00000462539 TRAK2O60296 914 aa9.24□□□□□ -0.93
SREBF2-204ENST00000462539 XRCC6P12956 609 aaKnown RBP eCLIP9.24□□□□□ -0.93
SREBF2-204ENST00000462539 TBC1D9Q6ZT07 1266 aa9.24□□□□□ -0.93
SREBF2-204ENST00000462539 WAPLQ7Z5K2 1190 aa9.24□□□□□ -0.93
SREBF2-204ENST00000462539 NME9Q86XW9 330 aa9.24□□□□□ -0.93
SREBF2-204ENST00000462539 SIRT2Q8IXJ6 389 aa9.24□□□□□ -0.93
SREBF2-204ENST00000462539 API5Q9BZZ5 524 aaKnown RBP9.24□□□□□ -0.93
SREBF2-204ENST00000462539 METP08581 1390 aa9.24□□□□□ -0.93
SREBF2-204ENST00000462539 MARF1Q9Y4F3 1742 aaKnown RBP9.23□□□□□ -0.93
SREBF2-204ENST00000462539 WASLO00401 505 aaPredicted RBP9.23□□□□□ -0.93
SREBF2-204ENST00000462539 CDC45O75419 566 aa9.23□□□□□ -0.93
SREBF2-204ENST00000462539 HSP90AB1P08238 724 aaKnown RBP9.23□□□□□ -0.93
SREBF2-204ENST00000462539 FBLN1P23142 703 aa9.23□□□□□ -0.93
SREBF2-204ENST00000462539 RAB3GAP1Q15042 981 aa9.23□□□□□ -0.93
SREBF2-204ENST00000462539 TWISTNBQ3B726 338 aaPredicted RBP9.23□□□□□ -0.93
SREBF2-204ENST00000462539 ANKRD45Q5TZF3 282 aa9.23□□□□□ -0.93
SREBF2-204ENST00000462539 STAG3Q9UJ98 1225 aa9.23□□□□□ -0.93
SREBF2-204ENST00000462539 PTMSP20962 102 aa9.22□□□□□ -0.93
SREBF2-204ENST00000462539 MRE11P49959 708 aa9.22□□□□□ -0.93
SREBF2-204ENST00000462539 C8orf58Q8NAV2 365 aa9.22□□□□□ -0.93
SREBF2-204ENST00000462539 TNPO1Q92973 898 aaKnown RBP9.22□□□□□ -0.93
SREBF2-204ENST00000462539 CFAP44Q96MT7 982 aa9.22□□□□□ -0.93
SREBF2-204ENST00000462539 ZRANB1Q9UGI0 708 aa9.22□□□□□ -0.93
SREBF2-204ENST00000462539 ISY1Q9ULR0 285 aaKnown RBP9.22□□□□□ -0.93
SREBF2-204ENST00000462539 CACNA1FO60840 1977 aa9.21□□□□□ -0.93
SREBF2-204ENST00000462539 KDM4FA0A1W2PPD8 638 aa9.21□□□□□ -0.94
SREBF2-204ENST00000462539 K7ELQ4 463 aaPredicted RBP9.21□□□□□ -0.94
SREBF2-204ENST00000462539 CD2BP2O95400 341 aaKnown RBP9.21□□□□□ -0.94
Retrieved 100 of 20,778 RNA–protein pairs in 49.2 ms