RNA–Protein interactions for RNA: ENST00000462279.5

ERCC8-204, Transcript of ERCC excision repair 8, CSA ubiquitin ligase complex subunit, humanhuman

TSL 5

Gene ERCC8, Length 3,424 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ERCC8-204ENST00000462279 ADGRF5Q8IZF2 1346 aa9.87□□□□□ -0.83
ERCC8-204ENST00000462279 CT47B1P0C2W7 299 aaPredicted RBP9.86□□□□□ -0.83
ERCC8-204ENST00000462279 GCC1Q96CN9 775 aa9.86□□□□□ -0.83
ERCC8-204ENST00000462279 ZDHHC9Q9Y397 364 aa9.86□□□□□ -0.83
ERCC8-204ENST00000462279 SYCP2Q9BX26 1530 aa9.86□□□□□ -0.83
ERCC8-204ENST00000462279 DUOX2Q9NRD8 1548 aa9.86□□□□□ -0.83
ERCC8-204ENST00000462279 CYP2E1P05181 493 aaPredicted RBP9.86□□□□□ -0.83
ERCC8-204ENST00000462279 GSPT1P15170 499 aaKnown RBP9.86□□□□□ -0.83
ERCC8-204ENST00000462279 NOLC1Q14978 699 aaKnown RBP eCLIP9.86□□□□□ -0.83
ERCC8-204ENST00000462279 C16orf71Q8IYS4 520 aaPredicted RBP9.86□□□□□ -0.83
ERCC8-204ENST00000462279 TRIM35Q9UPQ4 493 aa9.86□□□□□ -0.83
ERCC8-204ENST00000462279 IQSEC2Q5JU85 1478 aa9.86□□□□□ -0.83
ERCC8-204ENST00000462279 HMGN5P82970 282 aaKnown RBP9.85□□□□□ -0.83
ERCC8-204ENST00000462279 BCL11BQ9C0K0 894 aaPredicted RBP9.85□□□□□ -0.83
ERCC8-204ENST00000462279 CWC22Q9HCG8 908 aaKnown RBP9.85□□□□□ -0.83
ERCC8-204ENST00000462279 PPIP5K1Q6PFW1 1433 aa9.85□□□□□ -0.83
ERCC8-204ENST00000462279 SLC24A1O60721 1099 aa9.85□□□□□ -0.83
ERCC8-204ENST00000462279 SAFB2Q14151 953 aaKnown RBP eCLIP9.85□□□□□ -0.83
ERCC8-204ENST00000462279 PDCL2Q8N4E4 241 aa9.85□□□□□ -0.83
ERCC8-204ENST00000462279 USP32Q8NFA0 1604 aa9.85□□□□□ -0.83
ERCC8-204ENST00000462279 PPRC1Q5VV67 1664 aaKnown RBP9.84□□□□□ -0.83
ERCC8-204ENST00000462279 ZBTB7BO15156 539 aaPredicted RBP9.84□□□□□ -0.83
ERCC8-204ENST00000462279 SIRT2Q8IXJ6 389 aa9.84□□□□□ -0.83
ERCC8-204ENST00000462279 USP26Q9BXU7 913 aa9.84□□□□□ -0.83
ERCC8-204ENST00000462279 KANK1Q14678 1352 aa9.84□□□□□ -0.83
ERCC8-204ENST00000462279 MBD3O95983 291 aa9.84□□□□□ -0.83
ERCC8-204ENST00000462279 U2AF2P26368 475 aaKnown RBP eCLIP9.84□□□□□ -0.831e-6■■■■□ 25.1
ERCC8-204ENST00000462279 PDE4CQ08493 712 aa9.84□□□□□ -0.83
ERCC8-204ENST00000462279 TMEM132EQ6IEE7 984 aa9.84□□□□□ -0.83
ERCC8-204ENST00000462279 PRIMPOLQ96LW4 560 aa9.84□□□□□ -0.83
ERCC8-204ENST00000462279 NEK4P51957 841 aa9.84□□□□□ -0.83
ERCC8-204ENST00000462279 OTUD7AQ8TE49 926 aaPredicted RBP9.84□□□□□ -0.83
ERCC8-204ENST00000462279 GTPBP4Q9BZE4 634 aaKnown RBP9.84□□□□□ -0.83
ERCC8-204ENST00000462279 BCL2L12Q9HB09 334 aa9.84□□□□□ -0.83
ERCC8-204ENST00000462279 ARHGAP5Q13017 1502 aa9.84□□□□□ -0.84
ERCC8-204ENST00000462279 ATAD2Q6PL18 1390 aa9.83□□□□□ -0.84
ERCC8-204ENST00000462279 ZNF771Q7L3S4 317 aaPredicted RBP9.83□□□□□ -0.84
ERCC8-204ENST00000462279 CGNQ9P2M7 1197 aaKnown RBP9.83□□□□□ -0.84
ERCC8-204ENST00000462279 MROH1Q8NDA8 1641 aa9.83□□□□□ -0.84
ERCC8-204ENST00000462279 INTS3Q68E01 1043 aaKnown RBP9.83□□□□□ -0.84
ERCC8-204ENST00000462279 PLEKHM2Q8IWE5 1019 aa9.83□□□□□ -0.84
ERCC8-204ENST00000462279 FBXO41Q8TF61 875 aa9.83□□□□□ -0.84
ERCC8-204ENST00000462279 PIBF1Q8WXW3 757 aa9.83□□□□□ -0.84
ERCC8-204ENST00000462279 THUMPD2Q9BTF0 503 aaKnown RBP9.83□□□□□ -0.84
ERCC8-204ENST00000462279 GGNBP2Q9H3C7 697 aa9.83□□□□□ -0.84
ERCC8-204ENST00000462279 KIF20AO95235 890 aa9.82□□□□□ -0.84
ERCC8-204ENST00000462279 MAPK8IP2Q13387 824 aaPredicted RBP9.82□□□□□ -0.84
ERCC8-204ENST00000462279 ABCA6Q8N139 1617 aa9.82□□□□□ -0.84
ERCC8-204ENST00000462279 ADCY5O95622 1261 aa9.82□□□□□ -0.84
ERCC8-204ENST00000462279 CASC1Q6TDU7 716 aa9.82□□□□□ -0.84
ERCC8-204ENST00000462279 SYAP1Q96A49 352 aaPredicted RBP9.82□□□□□ -0.84
ERCC8-204ENST00000462279 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP9.82□□□□□ -0.84
ERCC8-204ENST00000462279 VGLL3A8MV65 326 aa9.82□□□□□ -0.84
ERCC8-204ENST00000462279 SMARCA5O60264 1052 aaPredicted RBP9.82□□□□□ -0.84
ERCC8-204ENST00000462279 GADD45BO75293 160 aaPredicted RBP9.82□□□□□ -0.84
ERCC8-204ENST00000462279 LETM1O95202 739 aaPredicted RBP9.82□□□□□ -0.84
ERCC8-204ENST00000462279 ZNF518AQ6AHZ1 1483 aa9.81□□□□□ -0.84
ERCC8-204ENST00000462279 ABCC11Q96J66 1382 aa9.81□□□□□ -0.84
ERCC8-204ENST00000462279 CHAF1AQ13111 956 aaPredicted RBP9.81□□□□□ -0.84
ERCC8-204ENST00000462279 PTPRTO14522 1441 aa9.81□□□□□ -0.84
ERCC8-204ENST00000462279 ZBTB22O15209 634 aa9.81□□□□□ -0.84
ERCC8-204ENST00000462279 HCLS1P14317 486 aaPredicted RBP9.81□□□□□ -0.84
ERCC8-204ENST00000462279 NOS1P29475 1434 aa9.81□□□□□ -0.84
ERCC8-204ENST00000462279 SPC24Q8NBT2 197 aa9.81□□□□□ -0.84
ERCC8-204ENST00000462279 CHD1O14646 1710 aa9.81□□□□□ -0.84
ERCC8-204ENST00000462279 CD109Q6YHK3 1445 aa9.81□□□□□ -0.84
ERCC8-204ENST00000462279 GTF2E1P29083 439 aaPredicted RBP9.81□□□□□ -0.84
ERCC8-204ENST00000462279 TTC22Q5TAA0 569 aa9.81□□□□□ -0.84
ERCC8-204ENST00000462279 CLTCL1P53675 1640 aa9.81□□□□□ -0.84
ERCC8-204ENST00000462279 MROH2AA6NES4 1674 aa9.8□□□□□ -0.84
ERCC8-204ENST00000462279 CFAP74Q9C0B2 1584 aa9.8□□□□□ -0.84
ERCC8-204ENST00000462279 SDSP20132 328 aa9.8□□□□□ -0.84
ERCC8-204ENST00000462279 TSPYL6Q8N831 410 aa9.8□□□□□ -0.84
ERCC8-204ENST00000462279 TMX3Q96JJ7 454 aa9.8□□□□□ -0.84
ERCC8-204ENST00000462279 TRPM2O94759 1503 aa9.8□□□□□ -0.84
ERCC8-204ENST00000462279 STAC3Q96MF2 364 aa9.8□□□□□ -0.84
ERCC8-204ENST00000462279 RIOK3O14730 519 aaKnown RBP9.79□□□□□ -0.84
ERCC8-204ENST00000462279 CHMP4BQ9H444 224 aaKnown RBP9.79□□□□□ -0.84
ERCC8-204ENST00000462279 PHF14O94880 888 aa9.79□□□□□ -0.84
ERCC8-204ENST00000462279 NUTM2DQ5VT03 806 aaPredicted RBP9.79□□□□□ -0.84
ERCC8-204ENST00000462279 PLEKHF1Q96S99 279 aa9.79□□□□□ -0.84
ERCC8-204ENST00000462279 CABP2Q9NPB3 220 aa9.79□□□□□ -0.84
ERCC8-204ENST00000462279 TET3O43151 1660 aa9.79□□□□□ -0.84
ERCC8-204ENST00000462279 REC8O95072 547 aa9.79□□□□□ -0.84
ERCC8-204ENST00000462279 ALDH1L2Q3SY69 923 aa9.79□□□□□ -0.84
ERCC8-204ENST00000462279 CDK11BP21127 795 aaKnown RBP9.78□□□□□ -0.84
ERCC8-204ENST00000462279 USP48Q86UV5 1035 aa9.78□□□□□ -0.84
ERCC8-204ENST00000462279 AFAP1Q8N556 730 aa9.78□□□□□ -0.84
ERCC8-204ENST00000462279 KIF3BO15066 747 aa9.78□□□□□ -0.84
ERCC8-204ENST00000462279 FKBP5Q13451 457 aaPredicted RBP9.78□□□□□ -0.84
ERCC8-204ENST00000462279 UPF3BQ9BZI7 483 aaKnown RBP9.78□□□□□ -0.84
ERCC8-204ENST00000462279 GTF2F1P35269 517 aaKnown RBP eCLIP9.77□□□□□ -0.85
ERCC8-204ENST00000462279 DIAPH3Q9NSV4 1193 aa9.77□□□□□ -0.85
ERCC8-204ENST00000462279 HMOX1P09601 288 aa9.77□□□□□ -0.85
ERCC8-204ENST00000462279 ABCC1P33527 1531 aa9.77□□□□□ -0.85
ERCC8-204ENST00000462279 FBLN1P23142 703 aa9.76□□□□□ -0.85
ERCC8-204ENST00000462279 TSHZ3Q63HK5 1081 aa9.76□□□□□ -0.85
ERCC8-204ENST00000462279 MRPL50Q8N5N7 158 aaKnown RBP9.76□□□□□ -0.85
ERCC8-204ENST00000462279 CFAP44Q96MT7 982 aa9.76□□□□□ -0.85
ERCC8-204ENST00000462279 PYCARDQ9ULZ3 195 aa9.76□□□□□ -0.85
Retrieved 100 of 20,778 RNA–protein pairs in 17.8 ms