RNA–Protein interactions for RNA: ENST00000462236.1

COPS3-204, Transcript of COP9 signalosome subunit 3, humanhuman

TSL 5

Gene COPS3, Length 551 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COPS3-204ENST00000462236 FHAD1B1AJZ9 1412 aa8.71□□□□□ -1.02
COPS3-204ENST00000462236 PDXDC2PQ6P474 469 aa8.7□□□□□ -1.02
COPS3-204ENST00000462236 ANKLE1Q8NAG6 615 aa8.7□□□□□ -1.02
COPS3-204ENST00000462236 RUSC2Q8N2Y8 1516 aa8.7□□□□□ -1.02
COPS3-204ENST00000462236 TOP2BQ02880 1626 aa8.69□□□□□ -1.02
COPS3-204ENST00000462236 UNC93B1Q9H1C4 597 aa8.69□□□□□ -1.02
COPS3-204ENST00000462236 PRG4Q92954 1404 aaPredicted RBP8.69□□□□□ -1.02
COPS3-204ENST00000462236 ZBBXA8MT70 800 aa8.68□□□□□ -1.02
COPS3-204ENST00000462236 MCCD1P59942 119 aaPredicted RBP8.68□□□□□ -1.02
COPS3-204ENST00000462236 PTK2Q05397 1052 aa8.68□□□□□ -1.02
COPS3-204ENST00000462236 NR1H3Q13133 447 aa8.68□□□□□ -1.02
COPS3-204ENST00000462236 CCDC24Q8N4L8 307 aa8.68□□□□□ -1.02
COPS3-204ENST00000462236 FCF1Q9Y324 198 aaKnown RBP8.68□□□□□ -1.02
COPS3-204ENST00000462236 EIF4ENIF1Q9NRA8 985 aaKnown RBP8.67□□□□□ -1.02
COPS3-204ENST00000462236 ZNF777Q9ULD5 760 aaPredicted RBP8.67□□□□□ -1.02
COPS3-204ENST00000462236 WRNQ14191 1432 aaPredicted RBP eCLIP8.66□□□□□ -1.02
COPS3-204ENST00000462236 RNF223E7ERA6 249 aa8.66□□□□□ -1.02
COPS3-204ENST00000462236 EIF4G2P78344 907 aaKnown RBP eCLIP8.66□□□□□ -1.02
COPS3-204ENST00000462236 FAM69CQ0P6D2 419 aa8.66□□□□□ -1.02
COPS3-204ENST00000462236 SERPINA10Q9UK55 444 aa8.66□□□□□ -1.02
COPS3-204ENST00000462236 RPIAP49247 311 aa8.65□□□□□ -1.02
COPS3-204ENST00000462236 PTCRAQ6ISU1 281 aaPredicted RBP8.65□□□□□ -1.02
COPS3-204ENST00000462236 ZBTB24O43167 697 aaPredicted RBP8.64□□□□□ -1.03
COPS3-204ENST00000462236 PPP1R18Q6NYC8 613 aa8.64□□□□□ -1.03
COPS3-204ENST00000462236 C1orf115Q9H7X2 142 aa8.64□□□□□ -1.03
COPS3-204ENST00000462236 ARID3CA6NKF2 412 aa8.63□□□□□ -1.03
COPS3-204ENST00000462236 FBXO45P0C2W1 286 aa8.63□□□□□ -1.03
COPS3-204ENST00000462236 VAC14Q08AM6 782 aa8.63□□□□□ -1.03
COPS3-204ENST00000462236 SH3BP5LQ7L8J4 393 aa8.63□□□□□ -1.03
COPS3-204ENST00000462236 CALR3Q96L12 384 aaKnown RBP8.63□□□□□ -1.03
COPS3-204ENST00000462236 ALG2Q9H553 416 aa8.63□□□□□ -1.03
COPS3-204ENST00000462236 GLI2P10070 1586 aa8.62□□□□□ -1.03
COPS3-204ENST00000462236 HECW2Q9P2P5 1572 aa8.62□□□□□ -1.03
COPS3-204ENST00000462236 BPHLQ86WA6 291 aaPredicted RBP8.62□□□□□ -1.03
COPS3-204ENST00000462236 GLMNQ92990 594 aa8.62□□□□□ -1.03
COPS3-204ENST00000462236 CCDC97Q96F63 343 aaPredicted RBP8.62□□□□□ -1.03
COPS3-204ENST00000462236 POM121CA8CG34 1229 aa8.61□□□□□ -1.03
COPS3-204ENST00000462236 WNT7BP56706 349 aa8.61□□□□□ -1.03
COPS3-204ENST00000462236 SEMA3FQ13275 785 aa8.61□□□□□ -1.03
COPS3-204ENST00000462236 HDGFL1Q5TGJ6 251 aa8.61□□□□□ -1.03
COPS3-204ENST00000462236 SH3RF1Q7Z6J0 888 aa8.61□□□□□ -1.03
COPS3-204ENST00000462236 ZNF511Q8NB15 262 aa8.61□□□□□ -1.03
COPS3-204ENST00000462236 BAP1Q92560 729 aa8.61□□□□□ -1.03
COPS3-204ENST00000462236 ARHGAP9Q9BRR9 750 aa8.61□□□□□ -1.03
COPS3-204ENST00000462236 ADGRL1O94910 1474 aa8.6□□□□□ -1.03
COPS3-204ENST00000462236 PPEF1O14829 653 aaPredicted RBP8.59□□□□□ -1.03
COPS3-204ENST00000462236 CD2BP2O95400 341 aaKnown RBP8.59□□□□□ -1.03
COPS3-204ENST00000462236 TRIM32Q13049 653 aa8.59□□□□□ -1.03
COPS3-204ENST00000462236 CCDC82Q8N4S0 544 aa8.59□□□□□ -1.03
COPS3-204ENST00000462236 ZBTB33Q86T24 672 aa8.58□□□□□ -1.04
COPS3-204ENST00000462236 OCSTAMPQ9BR26 566 aa8.58□□□□□ -1.04
COPS3-204ENST00000462236 PLA2G2EQ9NZK7 142 aa8.58□□□□□ -1.04
COPS3-204ENST00000462236 CDV3Q9UKY7 258 aaKnown RBP8.58□□□□□ -1.04
COPS3-204ENST00000462236 CUL7Q14999 1698 aa8.58□□□□□ -1.04
COPS3-204ENST00000462236 KIAA0586Q9BVV6 1533 aa8.58□□□□□ -1.04
COPS3-204ENST00000462236 MAP3K4Q9Y6R4 1608 aa8.58□□□□□ -1.04
COPS3-204ENST00000462236 COL17A1Q9UMD9 1497 aaPredicted RBP8.57□□□□□ -1.04
COPS3-204ENST00000462236 PLA2G2CQ5R387 149 aa8.57□□□□□ -1.04
COPS3-204ENST00000462236 CCDC125Q86Z20 511 aa8.57□□□□□ -1.04
COPS3-204ENST00000462236 NFATC2IPQ8NCF5 419 aa8.57□□□□□ -1.04
COPS3-204ENST00000462236 ADAM32Q8TC27 787 aa8.57□□□□□ -1.04
COPS3-204ENST00000462236 ADAMTS19Q8TE59 1207 aa8.57□□□□□ -1.04
COPS3-204ENST00000462236 ARXQ96QS3 562 aa8.57□□□□□ -1.04
COPS3-204ENST00000462236 A0A0G2JS52 829 aa8.56□□□□□ -1.04
COPS3-204ENST00000462236 VARSP26640 1264 aaKnown RBP8.56□□□□□ -1.04
COPS3-204ENST00000462236 SH3BP2P78314 561 aa8.56□□□□□ -1.04
COPS3-204ENST00000462236 TRMT44Q8IYL2 757 aaKnown RBP8.56□□□□□ -1.04
COPS3-204ENST00000462236 C1QTNF2Q9BXJ5 285 aa8.56□□□□□ -1.04
COPS3-204ENST00000462236 ABCC2Q92887 1545 aa8.55□□□□□ -1.04
COPS3-204ENST00000462236 AGERQ15109 404 aa8.55□□□□□ -1.04
COPS3-204ENST00000462236 LINC01559Q495D7 138 aa8.54□□□□□ -1.04
COPS3-204ENST00000462236 FOXJ1Q92949 421 aa8.54□□□□□ -1.04
COPS3-204ENST00000462236 PLB1Q6P1J6 1458 aa8.53□□□□□ -1.04
COPS3-204ENST00000462236 ERFEQ4G0M1 354 aa8.53□□□□□ -1.04
COPS3-204ENST00000462236 DZIP3Q86Y13 1208 aaKnown RBP8.53□□□□□ -1.04
COPS3-204ENST00000462236 MPNDQ8N594 471 aa8.53□□□□□ -1.04
COPS3-204ENST00000462236 FAM174AQ8TBP5 190 aa8.53□□□□□ -1.04
COPS3-204ENST00000462236 CEP126Q9P2H0 1117 aa8.53□□□□□ -1.04
COPS3-204ENST00000462236 PCDHB9Q9Y5E1 797 aa8.53□□□□□ -1.04
COPS3-204ENST00000462236 UHRF1BP1LA0JNW5 1464 aa8.52□□□□□ -1.05
COPS3-204ENST00000462236 MAGEB6P1A0A0J9YX57 407 aa8.52□□□□□ -1.05
COPS3-204ENST00000462236 PPP1R15AO75807 674 aaPredicted RBP8.52□□□□□ -1.05
COPS3-204ENST00000462236 SLC19A1P41440 591 aa8.52□□□□□ -1.05
COPS3-204ENST00000462236 C4orf48Q5BLP8 95 aa8.52□□□□□ -1.05
COPS3-204ENST00000462236 LIAT1Q6ZQX7 453 aa8.52□□□□□ -1.05
COPS3-204ENST00000462236 SLC10A4Q96EP9 437 aa8.52□□□□□ -1.05
COPS3-204ENST00000462236 PPP1R12CQ9BZL4 782 aa8.52□□□□□ -1.05
COPS3-204ENST00000462236 MAP4K5Q9Y4K4 846 aa8.52□□□□□ -1.05
COPS3-204ENST00000462236 ASXL2Q76L83 1435 aa8.52□□□□□ -1.05
COPS3-204ENST00000462236 LZTS3O60299 673 aaPredicted RBP8.51□□□□□ -1.05
COPS3-204ENST00000462236 SKOR1P84550 965 aa8.51□□□□□ -1.05
COPS3-204ENST00000462236 NBPF20Q3BBV1 942 aa8.51□□□□□ -1.05
COPS3-204ENST00000462236 RNF20Q5VTR2 975 aa8.51□□□□□ -1.05
COPS3-204ENST00000462236 V9GY48 417 aaPredicted RBP8.51□□□□□ -1.05
COPS3-204ENST00000462236 EPRSP07814 1512 aaKnown RBP8.5□□□□□ -1.05
COPS3-204ENST00000462236 SLFNL1Q499Z3 407 aa8.5□□□□□ -1.05
COPS3-204ENST00000462236 SEPT12Q8IYM1 358 aa8.5□□□□□ -1.05
COPS3-204ENST00000462236 TRIM52Q96A61 297 aa8.5□□□□□ -1.05
COPS3-204ENST00000462236 UCN2Q96RP3 112 aa8.5□□□□□ -1.05
COPS3-204ENST00000462236 CARD14Q9BXL6 1004 aa8.5□□□□□ -1.05
Retrieved 100 of 20,778 RNA–protein pairs in 10.6 ms