RNA–Protein interactions for RNA: ENST00000462198.5

SMARCC1-204, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin subfamily c member 1, humanhuman

TSL 2

Gene SMARCC1, Length 785 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCC1-204ENST00000462198 USP32Q8NFA0 1604 aa8.96□□□□□ -0.98
SMARCC1-204ENST00000462198 PTPN23Q9H3S7 1636 aa8.96□□□□□ -0.98
SMARCC1-204ENST00000462198 TULP1O00294 542 aaPredicted RBP8.96□□□□□ -0.98
SMARCC1-204ENST00000462198 NUBP1P53384 320 aa8.96□□□□□ -0.98
SMARCC1-204ENST00000462198 FAM196AQ6ZSG2 479 aa8.96□□□□□ -0.98
SMARCC1-204ENST00000462198 TNS1Q9HBL0 1735 aaKnown RBP8.96□□□□□ -0.98
SMARCC1-204ENST00000462198 NWD2Q9ULI1 1742 aa8.96□□□□□ -0.98
SMARCC1-204ENST00000462198 E9PCH4 1651 aa8.95□□□□□ -0.98
SMARCC1-204ENST00000462198 POTEB3A0JP26 581 aa8.95□□□□□ -0.98
SMARCC1-204ENST00000462198 POTEBQ6S5H4 581 aa8.95□□□□□ -0.98
SMARCC1-204ENST00000462198 HS3ST6Q96QI5 342 aa8.95□□□□□ -0.98
SMARCC1-204ENST00000462198 BTG4Q9NY30 223 aa8.95□□□□□ -0.98
SMARCC1-204ENST00000462198 PARD3Q8TEW0 1356 aa8.95□□□□□ -0.98
SMARCC1-204ENST00000462198 PLCH1Q4KWH8 1693 aa8.94□□□□□ -0.98
SMARCC1-204ENST00000462198 GIGYF1O75420 1035 aaPredicted RBP8.94□□□□□ -0.98
SMARCC1-204ENST00000462198 LMOD2Q6P5Q4 547 aa8.94□□□□□ -0.98
SMARCC1-204ENST00000462198 ANKRD50Q9ULJ7 1429 aa8.94□□□□□ -0.98
SMARCC1-204ENST00000462198 PSME1Q06323 249 aa8.93□□□□□ -0.98
SMARCC1-204ENST00000462198 UTRNP46939 3433 aa8.93□□□□□ -0.98
SMARCC1-204ENST00000462198 HFM1A2PYH4 1435 aa8.92□□□□□ -0.98
SMARCC1-204ENST00000462198 SPATA31A5Q5VU36 1347 aa8.92□□□□□ -0.98
SMARCC1-204ENST00000462198 SPATA31A7Q8IWB4 1347 aa8.92□□□□□ -0.98
SMARCC1-204ENST00000462198 ERICH6Q7L0X2 663 aa8.92□□□□□ -0.98
SMARCC1-204ENST00000462198 CIZ1Q9ULV3 898 aaPredicted RBP8.92□□□□□ -0.98
SMARCC1-204ENST00000462198 GTF3C3Q9Y5Q9 886 aa8.92□□□□□ -0.98
SMARCC1-204ENST00000462198 IQGAP3Q86VI3 1631 aa8.91□□□□□ -0.98
SMARCC1-204ENST00000462198 FAM50AQ14320 339 aaKnown RBP8.91□□□□□ -0.98
SMARCC1-204ENST00000462198 SYT17Q9BSW7 474 aa8.91□□□□□ -0.98
SMARCC1-204ENST00000462198 NUP188Q5SRE5 1749 aa8.91□□□□□ -0.98
SMARCC1-204ENST00000462198 VGFO15240 615 aaPredicted RBP8.9□□□□□ -0.98
SMARCC1-204ENST00000462198 FAM212AQ96EL1 285 aa8.9□□□□□ -0.98
SMARCC1-204ENST00000462198 ZBTB47Q9UFB7 747 aaPredicted RBP8.9□□□□□ -0.98
SMARCC1-204ENST00000462198 RREB1Q92766 1687 aa8.9□□□□□ -0.98
SMARCC1-204ENST00000462198 ADGRB2O60241 1585 aa8.9□□□□□ -0.99
SMARCC1-204ENST00000462198 CCDC144AA2RUR9 1427 aa8.89□□□□□ -0.99
SMARCC1-204ENST00000462198 FAM205CA6NFA0 338 aa8.89□□□□□ -0.99
SMARCC1-204ENST00000462198 ZBTB7AO95365 584 aa8.89□□□□□ -0.99
SMARCC1-204ENST00000462198 PTGER2P43116 358 aa8.89□□□□□ -0.99
SMARCC1-204ENST00000462198 WAPLQ7Z5K2 1190 aa8.89□□□□□ -0.99
SMARCC1-204ENST00000462198 RNF25Q96BH1 459 aaPredicted RBP8.89□□□□□ -0.99
SMARCC1-204ENST00000462198 FHDC1Q9C0D6 1143 aaPredicted RBP8.89□□□□□ -0.99
SMARCC1-204ENST00000462198 PDGFDQ9GZP0 370 aaPredicted RBP8.89□□□□□ -0.99
SMARCC1-204ENST00000462198 PDE3BQ13370 1112 aa8.88□□□□□ -0.99
SMARCC1-204ENST00000462198 NRAPQ86VF7 1730 aa8.88□□□□□ -0.99
SMARCC1-204ENST00000462198 NAIPQ13075 1403 aa8.88□□□□□ -0.99
SMARCC1-204ENST00000462198 TNS3Q68CZ2 1445 aa8.88□□□□□ -0.99
SMARCC1-204ENST00000462198 NUP155O75694 1391 aa8.87□□□□□ -0.99
SMARCC1-204ENST00000462198 CDC42BPGQ6DT37 1551 aa8.87□□□□□ -0.99
SMARCC1-204ENST00000462198 NKX1-1Q15270 411 aaPredicted RBP8.87□□□□□ -0.99
SMARCC1-204ENST00000462198 C3orf67Q6ZVT6 689 aa8.87□□□□□ -0.99
SMARCC1-204ENST00000462198 PDCD7Q8N8D1 485 aaKnown RBP8.87□□□□□ -0.99
SMARCC1-204ENST00000462198 ARXQ96QS3 562 aa8.87□□□□□ -0.99
SMARCC1-204ENST00000462198 STK26Q9P289 416 aa8.87□□□□□ -0.99
SMARCC1-204ENST00000462198 PHF8Q9UPP1 1060 aa8.87□□□□□ -0.99
SMARCC1-204ENST00000462198 THSD7AQ9UPZ6 1657 aa8.87□□□□□ -0.99
SMARCC1-204ENST00000462198 NRKQ7Z2Y5 1582 aa8.86□□□□□ -0.99
SMARCC1-204ENST00000462198 SPATA31A1Q5TZJ5 1347 aa8.86□□□□□ -0.99
SMARCC1-204ENST00000462198 NEXMIFQ5QGS0 1516 aa8.86□□□□□ -0.99
SMARCC1-204ENST00000462198 GPR162Q16538 588 aa8.86□□□□□ -0.99
SMARCC1-204ENST00000462198 RRBP1Q9P2E9 1410 aaKnown RBP8.86□□□□□ -0.99
SMARCC1-204ENST00000462198 RGPD8O14715 1765 aaPredicted RBP8.86□□□□□ -0.99
SMARCC1-204ENST00000462198 SBNO1A3KN83 1393 aa8.86□□□□□ -0.99
SMARCC1-204ENST00000462198 ARHGEF10O15013 1369 aa8.86□□□□□ -0.99
SMARCC1-204ENST00000462198 PRAG1Q86YV5 1406 aa8.85□□□□□ -0.99
SMARCC1-204ENST00000462198 ABCA3Q99758 1704 aa8.85□□□□□ -0.99
SMARCC1-204ENST00000462198 MYOM1P52179 1685 aa8.85□□□□□ -0.99
SMARCC1-204ENST00000462198 COL14A1Q05707 1796 aaKnown RBP8.84□□□□□ -0.99
SMARCC1-204ENST00000462198 GTPBP6O43824 516 aaPredicted RBP8.84□□□□□ -0.99
SMARCC1-204ENST00000462198 ITGAEP38570 1179 aa8.84□□□□□ -0.99
SMARCC1-204ENST00000462198 USP35Q9P2H5 1018 aa8.84□□□□□ -0.99
SMARCC1-204ENST00000462198 KIF1AQ12756 1690 aa8.84□□□□□ -0.99
SMARCC1-204ENST00000462198 PLSCR1O15162 318 aa8.83□□□□□ -1
SMARCC1-204ENST00000462198 TMEM132AQ24JP5 1023 aa8.83□□□□□ -1
SMARCC1-204ENST00000462198 BCL11BQ9C0K0 894 aaPredicted RBP8.83□□□□□ -1
SMARCC1-204ENST00000462198 ANO8Q9HCE9 1232 aaPredicted RBP8.83□□□□□ -1
SMARCC1-204ENST00000462198 STRN4Q9NRL3 753 aa8.83□□□□□ -1
SMARCC1-204ENST00000462198 CASZ1Q86V15 1759 aa8.83□□□□□ -1
SMARCC1-204ENST00000462198 KIF1BO60333 1816 aa8.82□□□□□ -1
SMARCC1-204ENST00000462198 HSPA6P17066 643 aa8.82□□□□□ -1
SMARCC1-204ENST00000462198 PMFBP1Q8TBY8 1022 aa8.82□□□□□ -1
SMARCC1-204ENST00000462198 L3MBTL3Q96JM7 780 aaPredicted RBP8.82□□□□□ -1
SMARCC1-204ENST00000462198 PRDM11Q9NQV5 511 aa8.82□□□□□ -1
SMARCC1-204ENST00000462198 FMN2Q9NZ56 1722 aa8.82□□□□□ -1
SMARCC1-204ENST00000462198 EVA1CP58658 441 aa8.81□□□□□ -1
SMARCC1-204ENST00000462198 BARGINQ6ZT62 677 aa8.81□□□□□ -1
SMARCC1-204ENST00000462198 PLEKHH1Q9ULM0 1364 aa8.81□□□□□ -1
SMARCC1-204ENST00000462198 RPGRIP1LQ68CZ1 1315 aa8.8□□□□□ -1
SMARCC1-204ENST00000462198 CHRNA2Q15822 529 aa8.8□□□□□ -1
SMARCC1-204ENST00000462198 TMEM132EQ6IEE7 984 aa8.8□□□□□ -1
SMARCC1-204ENST00000462198 RNF166Q96A37 237 aaPredicted RBP8.8□□□□□ -1
SMARCC1-204ENST00000462198 MTFR1LQ9H019 292 aa8.8□□□□□ -1
SMARCC1-204ENST00000462198 DAXXQ9UER7 740 aaPredicted RBP8.8□□□□□ -1
SMARCC1-204ENST00000462198 C11orf95C9JLR9 678 aaPredicted RBP8.79□□□□□ -1
SMARCC1-204ENST00000462198 STK32BQ9NY57 414 aa8.79□□□□□ -1
SMARCC1-204ENST00000462198 CLTCL1P53675 1640 aa8.79□□□□□ -1
SMARCC1-204ENST00000462198 DLC1Q96QB1 1528 aa8.79□□□□□ -1
SMARCC1-204ENST00000462198 NRXN1Q9ULB1 1477 aa8.78□□□□□ -1
SMARCC1-204ENST00000462198 ABCC11Q96J66 1382 aa8.78□□□□□ -1
SMARCC1-204ENST00000462198 GSE1Q14687 1217 aa8.78□□□□□ -1
SMARCC1-204ENST00000462198 SLC15A2Q16348 729 aa8.78□□□□□ -1
Retrieved 100 of 20,778 RNA–protein pairs in 14.6 ms