RNA–Protein interactions for RNA: ENST00000462038.1

ITM2A-204, Transcript of integral membrane protein 2A, humanhuman

TSL 5

Gene ITM2A, Length 190 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ITM2A-204ENST00000462038 DEPDC4Q8N2C3 294 aa8.3□□□□□ -1.08
ITM2A-204ENST00000462038 FAM200AQ8TCP9 573 aa8.3□□□□□ -1.08
ITM2A-204ENST00000462038 COPS2P61201 443 aa8.29□□□□□ -1.08
ITM2A-204ENST00000462038 CRTC2Q53ET0 693 aaPredicted RBP8.29□□□□□ -1.08
ITM2A-204ENST00000462038 THSD4Q6ZMP0 1018 aa8.29□□□□□ -1.08
ITM2A-204ENST00000462038 SH3BP5LQ7L8J4 393 aa8.29□□□□□ -1.08
ITM2A-204ENST00000462038 TXNDC2Q86VQ3 553 aa8.29□□□□□ -1.08
ITM2A-204ENST00000462038 UNC93B1Q9H1C4 597 aa8.29□□□□□ -1.08
ITM2A-204ENST00000462038 AMOTL2Q9Y2J4 779 aa8.29□□□□□ -1.08
ITM2A-204ENST00000462038 SSFA2P28290 1259 aa8.28□□□□□ -1.08
ITM2A-204ENST00000462038 EML3Q32P44 896 aa8.28□□□□□ -1.08
ITM2A-204ENST00000462038 TRAF7Q6Q0C0 670 aa8.28□□□□□ -1.08
ITM2A-204ENST00000462038 TRIM50Q86XT4 487 aa8.28□□□□□ -1.08
ITM2A-204ENST00000462038 CLP1Q92989 425 aaKnown RBP8.28□□□□□ -1.08
ITM2A-204ENST00000462038 PRDM9Q9NQV7 894 aa8.28□□□□□ -1.08
ITM2A-204ENST00000462038 ARID4AP29374 1257 aaPredicted RBP8.27□□□□□ -1.09
ITM2A-204ENST00000462038 ATP1A2P50993 1020 aa8.27□□□□□ -1.09
ITM2A-204ENST00000462038 FAM69CQ0P6D2 419 aa8.27□□□□□ -1.09
ITM2A-204ENST00000462038 SWI5Q1ZZU3 235 aa8.27□□□□□ -1.09
ITM2A-204ENST00000462038 PHLDB3Q6NSJ2 640 aa8.27□□□□□ -1.09
ITM2A-204ENST00000462038 SH3RF1Q7Z6J0 888 aa8.27□□□□□ -1.09
ITM2A-204ENST00000462038 ANKMY2Q8IV38 441 aa8.27□□□□□ -1.09
ITM2A-204ENST00000462038 MYT1LQ9UL68 1186 aa8.27□□□□□ -1.09
ITM2A-204ENST00000462038 FOXD4L5Q5VV16 416 aaPredicted RBP8.26□□□□□ -1.09
ITM2A-204ENST00000462038 PTCRAQ6ISU1 281 aaPredicted RBP8.26□□□□□ -1.09
ITM2A-204ENST00000462038 DZIP3Q86Y13 1208 aaKnown RBP8.26□□□□□ -1.09
ITM2A-204ENST00000462038 FOXD4L4Q8WXT5 416 aaPredicted RBP8.26□□□□□ -1.09
ITM2A-204ENST00000462038 NOD1Q9Y239 953 aa8.26□□□□□ -1.09
ITM2A-204ENST00000462038 RNF20Q5VTR2 975 aa8.25□□□□□ -1.09
ITM2A-204ENST00000462038 BPHLQ86WA6 291 aaPredicted RBP8.25□□□□□ -1.09
ITM2A-204ENST00000462038 CCDC125Q86Z20 511 aa8.25□□□□□ -1.09
ITM2A-204ENST00000462038 LARGE2Q8N3Y3 721 aa8.25□□□□□ -1.09
ITM2A-204ENST00000462038 OGFOD1Q8N543 542 aa8.25□□□□□ -1.09
ITM2A-204ENST00000462038 LCE2DQ5TA82 110 aaPredicted RBP8.24□□□□□ -1.09
ITM2A-204ENST00000462038 CCDC24Q8N4L8 307 aa8.24□□□□□ -1.09
ITM2A-204ENST00000462038 MTRQ99707 1265 aa8.24□□□□□ -1.09
ITM2A-204ENST00000462038 SLC6A16Q9GZN6 736 aa8.24□□□□□ -1.09
ITM2A-204ENST00000462038 IL21Q9HBE4 155 aa8.23□□□□□ -1.09
ITM2A-204ENST00000462038 DNAAF2Q9NVR5 837 aaKnown RBP8.23□□□□□ -1.09
ITM2A-204ENST00000462038 TLL1O43897 1013 aa8.22□□□□□ -1.09
ITM2A-204ENST00000462038 CLDN10P78369 228 aa8.22□□□□□ -1.09
ITM2A-204ENST00000462038 DPYDQ12882 1025 aa8.22□□□□□ -1.09
ITM2A-204ENST00000462038 TSGA10IPQ3SY00 556 aa8.22□□□□□ -1.09
ITM2A-204ENST00000462038 SIX5Q8N196 739 aa8.22□□□□□ -1.09
ITM2A-204ENST00000462038 C1orf216Q8TAB5 229 aa8.22□□□□□ -1.09
ITM2A-204ENST00000462038 SIRT1Q96EB6 747 aa8.22□□□□□ -1.09
ITM2A-204ENST00000462038 SLAIN2Q9P270 581 aa8.22□□□□□ -1.09
ITM2A-204ENST00000462038 DOLKQ9UPQ8 538 aa8.22□□□□□ -1.09
ITM2A-204ENST00000462038 ZBTB7BO15156 539 aaPredicted RBP8.21□□□□□ -1.1
ITM2A-204ENST00000462038 ATP2B4P23634 1241 aa8.21□□□□□ -1.1
ITM2A-204ENST00000462038 ERFEQ4G0M1 354 aa8.21□□□□□ -1.1
ITM2A-204ENST00000462038 TJAP1Q5JTD0 557 aa8.21□□□□□ -1.1
ITM2A-204ENST00000462038 BAP1Q92560 729 aa8.21□□□□□ -1.1
ITM2A-204ENST00000462038 CCDC85AQ96PX6 553 aaPredicted RBP8.21□□□□□ -1.1
ITM2A-204ENST00000462038 MAGEB6P1A0A0J9YX57 407 aa8.2□□□□□ -1.1
ITM2A-204ENST00000462038 GIGYF1O75420 1035 aaPredicted RBP8.2□□□□□ -1.1
ITM2A-204ENST00000462038 DKK1O94907 266 aa8.2□□□□□ -1.1
ITM2A-204ENST00000462038 ERCC3P19447 782 aa8.2□□□□□ -1.1
ITM2A-204ENST00000462038 RBM25P49756 843 aaKnown RBP8.2□□□□□ -1.1
ITM2A-204ENST00000462038 SEPT12Q8IYM1 358 aa8.2□□□□□ -1.1
ITM2A-204ENST00000462038 KCTD12Q96CX2 325 aaKnown RBP8.2□□□□□ -1.1
ITM2A-204ENST00000462038 CDV3Q9UKY7 258 aaKnown RBP8.2□□□□□ -1.1
ITM2A-204ENST00000462038 E9PSI1 815 aa8.19□□□□□ -1.1
ITM2A-204ENST00000462038 SEC13P55735 322 aa8.19□□□□□ -1.1
ITM2A-204ENST00000462038 USP4Q13107 963 aa8.19□□□□□ -1.1
ITM2A-204ENST00000462038 AGERQ15109 404 aa8.19□□□□□ -1.1
ITM2A-204ENST00000462038 NBPF20Q3BBV1 942 aa8.19□□□□□ -1.1
ITM2A-204ENST00000462038 ZNF511Q8NB15 262 aa8.19□□□□□ -1.1
ITM2A-204ENST00000462038 ZNF594Q96JF6 807 aaPredicted RBP8.19□□□□□ -1.1
ITM2A-204ENST00000462038 CARD14Q9BXL6 1004 aa8.19□□□□□ -1.1
ITM2A-204ENST00000462038 RBM19Q9Y4C8 960 aaKnown RBP8.19□□□□□ -1.1
ITM2A-204ENST00000462038 GTF2IP78347 998 aa8.18□□□□□ -1.1
ITM2A-204ENST00000462038 TRMT44Q8IYL2 757 aaKnown RBP8.18□□□□□ -1.1
ITM2A-204ENST00000462038 ZNF516Q92618 1163 aa8.18□□□□□ -1.1
ITM2A-204ENST00000462038 SLC10A4Q96EP9 437 aa8.18□□□□□ -1.1
ITM2A-204ENST00000462038 C1QTNF2Q9BXJ5 285 aa8.18□□□□□ -1.1
ITM2A-204ENST00000462038 PCDH10Q9P2E7 1040 aa8.18□□□□□ -1.1
ITM2A-204ENST00000462038 SOWAHDA6NJG2 315 aa8.17□□□□□ -1.1
ITM2A-204ENST00000462038 ESPNB1AK53 854 aa8.17□□□□□ -1.1
ITM2A-204ENST00000462038 OXLD1Q5BKU9 147 aa8.17□□□□□ -1.1
ITM2A-204ENST00000462038 CCDC102BQ68D86 513 aa8.17□□□□□ -1.1
ITM2A-204ENST00000462038 FOXJ1Q92949 421 aa8.17□□□□□ -1.1
ITM2A-204ENST00000462038 KRTAP3-3Q9BYR6 98 aa8.17□□□□□ -1.1
ITM2A-204ENST00000462038 KRTAP3-2Q9BYR7 98 aa8.17□□□□□ -1.1
ITM2A-204ENST00000462038 C4orf48Q5BLP8 95 aa8.16□□□□□ -1.1
ITM2A-204ENST00000462038 ZNF428Q96B54 188 aa8.16□□□□□ -1.1
ITM2A-204ENST00000462038 KIAA1024Q9UPX6 916 aa8.16□□□□□ -1.1
ITM2A-204ENST00000462038 PCDHGA11Q9Y5H2 935 aa8.16□□□□□ -1.1
ITM2A-204ENST00000462038 POTEMA6NI47 508 aa8.15□□□□□ -1.1
ITM2A-204ENST00000462038 TAS1R3Q7RTX0 852 aa8.15□□□□□ -1.1
ITM2A-204ENST00000462038 FCF1Q9Y324 198 aaKnown RBP8.15□□□□□ -1.1
ITM2A-204ENST00000462038 S1PR4O95977 384 aa8.14□□□□□ -1.11
ITM2A-204ENST00000462038 LINC01559Q495D7 138 aa8.14□□□□□ -1.11
ITM2A-204ENST00000462038 CXXC1Q9P0U4 656 aaPredicted RBP8.14□□□□□ -1.11
ITM2A-204ENST00000462038 EGFL7Q9UHF1 273 aa8.14□□□□□ -1.11
ITM2A-204ENST00000462038 M0R2N6 131 aa8.13□□□□□ -1.11
ITM2A-204ENST00000462038 PTPN5P54829 565 aa8.13□□□□□ -1.11
ITM2A-204ENST00000462038 SH3BP2P78314 561 aa8.13□□□□□ -1.11
ITM2A-204ENST00000462038 OCLNQ16625 522 aa8.13□□□□□ -1.11
ITM2A-204ENST00000462038 TPCN2Q8NHX9 752 aa8.13□□□□□ -1.11
Retrieved 100 of 20,778 RNA–protein pairs in 34.5 ms