RNA–Protein interactions for RNA: ENST00000461437.5

NUP50-213, Transcript of nucleoporin 50, humanhuman

TSL 4

Gene NUP50, Length 531 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUP50-213ENST00000461437 USP47Q96K76 1375 aa21.87■■□□□ 1.09
NUP50-213ENST00000461437 EN1Q05925 392 aaPredicted RBP21.87■■□□□ 1.09
NUP50-213ENST00000461437 HDGFL2Q7Z4V5 671 aaPredicted RBP21.87■■□□□ 1.09
NUP50-213ENST00000461437 TRIM37O94972 964 aa21.86■■□□□ 1.09
NUP50-213ENST00000461437 TOM1L2Q6ZVM7 507 aa21.86■■□□□ 1.09
NUP50-213ENST00000461437 KCNH5Q8NCM2 988 aa21.86■■□□□ 1.09
NUP50-213ENST00000461437 BAG6P46379 1132 aa21.85■■□□□ 1.09
NUP50-213ENST00000461437 PDE3BQ13370 1112 aa21.85■■□□□ 1.09
NUP50-213ENST00000461437 USP31Q70CQ4 1352 aa21.85■■□□□ 1.09
NUP50-213ENST00000461437 EDC4Q6P2E9 1401 aaKnown RBP21.84■■□□□ 1.09
NUP50-213ENST00000461437 WDR17Q8IZU2 1322 aa21.83■■□□□ 1.09
NUP50-213ENST00000461437 SBF2Q86WG5 1849 aa21.83■■□□□ 1.09
NUP50-213ENST00000461437 CSB-PGBD3P0DP91 1061 aa21.82■■□□□ 1.08
NUP50-213ENST00000461437 TERF2IPQ9NYB0 399 aa21.82■■□□□ 1.08
NUP50-213ENST00000461437 THRAP3Q9Y2W1 955 aaKnown RBP21.82■■□□□ 1.08
NUP50-213ENST00000461437 PEAK1Q9H792 1746 aa21.82■■□□□ 1.08
NUP50-213ENST00000461437 PSDA5PKW4 1024 aaPredicted RBP21.81■■□□□ 1.08
NUP50-213ENST00000461437 FAM196AQ6ZSG2 479 aa21.81■■□□□ 1.08
NUP50-213ENST00000461437 OVOS2A0A0J9YW53 1432 aa21.8■■□□□ 1.08
NUP50-213ENST00000461437 OVOS2Q6IE36 1432 aa21.8■■□□□ 1.08
NUP50-213ENST00000461437 EZH2Q15910 746 aaKnown RBP21.8■■□□□ 1.08
NUP50-213ENST00000461437 PUS7Q96PZ0 661 aaKnown RBP21.79■■□□□ 1.08
NUP50-213ENST00000461437 FBLN1P23142 703 aa21.78■■□□□ 1.08
NUP50-213ENST00000461437 MYOM1P52179 1685 aa21.78■■□□□ 1.08
NUP50-213ENST00000461437 APBA3O96018 575 aa21.77■■□□□ 1.08
NUP50-213ENST00000461437 RGPD2P0DJD1 1756 aa21.76■■□□□ 1.07
NUP50-213ENST00000461437 DISP2A7MBM2 1401 aa21.76■■□□□ 1.07
NUP50-213ENST00000461437 TMF1P82094 1093 aa21.76■■□□□ 1.07
NUP50-213ENST00000461437 RREB1Q92766 1687 aa21.75■■□□□ 1.07
NUP50-213ENST00000461437 ABCC6O95255 1503 aa21.75■■□□□ 1.07
NUP50-213ENST00000461437 DDB1Q16531 1140 aa21.75■■□□□ 1.07
NUP50-213ENST00000461437 CARD10Q9BWT7 1032 aa21.75■■□□□ 1.07
NUP50-213ENST00000461437 KIF20BQ96Q89 1820 aa21.75■■□□□ 1.07
NUP50-213ENST00000461437 NUP188Q5SRE5 1749 aa21.75■■□□□ 1.07
NUP50-213ENST00000461437 NINLQ9Y2I6 1382 aa21.74■■□□□ 1.07
NUP50-213ENST00000461437 ANKRD36BQ8N2N9 1353 aa21.74■■□□□ 1.07
NUP50-213ENST00000461437 PTF1AQ7RTS3 328 aa21.73■■□□□ 1.07
NUP50-213ENST00000461437 CAMKK2Q96RR4 588 aa21.73■■□□□ 1.07
NUP50-213ENST00000461437 OVOS2A0A0G2JMS6 1433 aa21.72■■□□□ 1.07
NUP50-213ENST00000461437 MARCH10Q8NA82 808 aaPredicted RBP21.72■■□□□ 1.07
NUP50-213ENST00000461437 CCER1Q8TC90 406 aaPredicted RBP21.72■■□□□ 1.07
NUP50-213ENST00000461437 ERBB3P21860 1342 aa21.72■■□□□ 1.07
NUP50-213ENST00000461437 CLSPNQ9HAW4 1339 aa21.72■■□□□ 1.07
NUP50-213ENST00000461437 KAT6BQ8WYB5 2073 aa21.71■■□□□ 1.07
NUP50-213ENST00000461437 ANKRD24Q8TF21 1146 aa21.71■■□□□ 1.07
NUP50-213ENST00000461437 LTV1Q96GA3 475 aaPredicted RBP21.71■■□□□ 1.07
NUP50-213ENST00000461437 NLRP2Q9NX02 1062 aa21.71■■□□□ 1.07
NUP50-213ENST00000461437 R3HDM1Q15032 1099 aaKnown RBP21.7■■□□□ 1.06
NUP50-213ENST00000461437 GGNBP2Q9H3C7 697 aa21.7■■□□□ 1.06
NUP50-213ENST00000461437 COG3Q96JB2 828 aa21.69■■□□□ 1.06
NUP50-213ENST00000461437 TIMELESSQ9UNS1 1208 aa21.69■■□□□ 1.06
NUP50-213ENST00000461437 CCDC7Q96M83 1385 aa21.68■■□□□ 1.06
NUP50-213ENST00000461437 MAP3K19Q56UN5 1328 aa21.67■■□□□ 1.06
NUP50-213ENST00000461437 SLC24A1O60721 1099 aa21.67■■□□□ 1.06
NUP50-213ENST00000461437 TNS2Q63HR2 1409 aa21.66■■□□□ 1.06
NUP50-213ENST00000461437 FYB1O15117 783 aa21.65■■□□□ 1.06
NUP50-213ENST00000461437 RRS1Q15050 365 aaKnown RBP21.65■■□□□ 1.06
NUP50-213ENST00000461437 IP6K1Q92551 441 aa21.65■■□□□ 1.06
NUP50-213ENST00000461437 POLR3GLQ9BT43 218 aa21.65■■□□□ 1.06
NUP50-213ENST00000461437 CDCA7Q9BWT1 371 aaPredicted RBP21.65■■□□□ 1.06
NUP50-213ENST00000461437 FAM208AQ9UK61 1670 aaKnown RBP21.65■■□□□ 1.06
NUP50-213ENST00000461437 EXOC5O00471 708 aa21.64■■□□□ 1.05
NUP50-213ENST00000461437 LRP5O75197 1615 aa21.64■■□□□ 1.05
NUP50-213ENST00000461437 CARD14Q9BXL6 1004 aa21.63■■□□□ 1.05
NUP50-213ENST00000461437 NSD3Q9BZ95 1437 aa21.63■■□□□ 1.05
NUP50-213ENST00000461437 RGPD3A6NKT7 1758 aaPredicted RBP21.62■■□□□ 1.05
NUP50-213ENST00000461437 RGPD4Q7Z3J3 1758 aa21.62■■□□□ 1.05
NUP50-213ENST00000461437 HOXC9P31274 260 aa21.62■■□□□ 1.05
NUP50-213ENST00000461437 AMPHP49418 695 aa21.62■■□□□ 1.05
NUP50-213ENST00000461437 IL2RBP14784 551 aa21.61■■□□□ 1.05
NUP50-213ENST00000461437 CDCA8Q53HL2 280 aa21.61■■□□□ 1.05
NUP50-213ENST00000461437 NHSQ6T4R5 1651 aa21.6■■□□□ 1.05
NUP50-213ENST00000461437 ACSBG1Q96GR2 724 aa21.6■■□□□ 1.05
NUP50-213ENST00000461437 PARD3Q8TEW0 1356 aa21.6■■□□□ 1.05
NUP50-213ENST00000461437 KCNQ2O43526 872 aa21.59■■□□□ 1.05
NUP50-213ENST00000461437 HSPA5P11021 654 aaKnown RBP21.59■■□□□ 1.05
NUP50-213ENST00000461437 SHANK3Q9BYB0 1731 aa21.59■■□□□ 1.05
NUP50-213ENST00000461437 BTAF1O14981 1849 aa21.58■■□□□ 1.05
NUP50-213ENST00000461437 BCL11BQ9C0K0 894 aaPredicted RBP21.58■■□□□ 1.05
NUP50-213ENST00000461437 MAP2P11137 1827 aaKnown RBP21.57■■□□□ 1.04
NUP50-213ENST00000461437 BCL9O00512 1426 aa21.56■■□□□ 1.04
NUP50-213ENST00000461437 C11orf95C9JLR9 678 aaPredicted RBP21.56■■□□□ 1.04
NUP50-213ENST00000461437 USHBP1Q8N6Y0 703 aa21.56■■□□□ 1.04
NUP50-213ENST00000461437 EIF4G2P78344 907 aaKnown RBP eCLIP21.54■■□□□ 1.04
NUP50-213ENST00000461437 PROM2Q8N271 834 aa21.54■■□□□ 1.04
NUP50-213ENST00000461437 ANO8Q9HCE9 1232 aaPredicted RBP21.54■■□□□ 1.04
NUP50-213ENST00000461437 DOT1LQ8TEK3 1739 aa21.54■■□□□ 1.04
NUP50-213ENST00000461437 MEGF6O75095 1541 aa21.54■■□□□ 1.04
NUP50-213ENST00000461437 RTL1A6NKG5 1358 aa21.53■■□□□ 1.04
NUP50-213ENST00000461437 HSP90AB2PQ58FF8 381 aa21.53■■□□□ 1.04
NUP50-213ENST00000461437 DDX54Q8TDD1 881 aaKnown RBP21.53■■□□□ 1.04
NUP50-213ENST00000461437 ANKRD26Q9UPS8 1709 aa21.52■■□□□ 1.04
NUP50-213ENST00000461437 PLSCR1O15162 318 aa21.52■■□□□ 1.04
NUP50-213ENST00000461437 NBPF14Q5TI25 921 aa21.52■■□□□ 1.04
NUP50-213ENST00000461437 NBPF6Q5VWK0 638 aa21.52■■□□□ 1.04
NUP50-213ENST00000461437 NBPF4Q96M43 638 aa21.52■■□□□ 1.04
NUP50-213ENST00000461437 EMILIN1Q9Y6C2 1016 aa21.52■■□□□ 1.04
NUP50-213ENST00000461437 TXNRD1Q16881 649 aa21.48■■□□□ 1.03
NUP50-213ENST00000461437 PDGFDQ9GZP0 370 aaPredicted RBP21.48■■□□□ 1.03
NUP50-213ENST00000461437 CASZ1Q86V15 1759 aa21.48■■□□□ 1.03
Retrieved 100 of 20,778 RNA–protein pairs in 48 ms