RNA–Protein interactions for RNA: ENST00000461433.1

SSBP1-202, Transcript of single stranded DNA binding protein 1, humanhuman

TSL 1 (best)

Gene SSBP1, Length 1,694 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSBP1-202ENST00000461433 AFF2P51816 1311 aa15.37■□□□□ 0.05
SSBP1-202ENST00000461433 ZBTB7CA1YPR0 619 aa15.36■□□□□ 0.05
SSBP1-202ENST00000461433 POLKQ9UBT6 870 aa15.36■□□□□ 0.05
SSBP1-202ENST00000461433 ABCC6O95255 1503 aa15.36■□□□□ 0.05
SSBP1-202ENST00000461433 TNKS1BP1Q9C0C2 1729 aaKnown RBP15.35■□□□□ 0.05
SSBP1-202ENST00000461433 ILDR2Q71H61 639 aa15.35■□□□□ 0.05
SSBP1-202ENST00000461433 BTG4Q9NY30 223 aa15.35■□□□□ 0.05
SSBP1-202ENST00000461433 EMILIN1Q9Y6C2 1016 aa15.35■□□□□ 0.05
SSBP1-202ENST00000461433 PARD3Q8TEW0 1356 aa15.34■□□□□ 0.05
SSBP1-202ENST00000461433 IP6K1Q92551 441 aa15.34■□□□□ 0.05
SSBP1-202ENST00000461433 USP21Q9UK80 565 aa15.34■□□□□ 0.05
SSBP1-202ENST00000461433 SMG6Q86US8 1419 aaKnown RBP15.34■□□□□ 0.05
SSBP1-202ENST00000461433 COL5A2P05997 1499 aaPredicted RBP15.33■□□□□ 0.04
SSBP1-202ENST00000461433 HOXC9P31274 260 aa15.33■□□□□ 0.04
SSBP1-202ENST00000461433 UNC5CLQ8IV45 518 aa15.33■□□□□ 0.04
SSBP1-202ENST00000461433 RTL1A6NKG5 1358 aa15.32■□□□□ 0.04
SSBP1-202ENST00000461433 KIF24Q5T7B8 1368 aa15.32■□□□□ 0.04
SSBP1-202ENST00000461433 AMPHP49418 695 aa15.32■□□□□ 0.04
SSBP1-202ENST00000461433 BLMP54132 1417 aaPredicted RBP15.31■□□□□ 0.04
SSBP1-202ENST00000461433 FLT4P35916 1363 aa15.31■□□□□ 0.04
SSBP1-202ENST00000461433 HSP90AB2PQ58FF8 381 aa15.31■□□□□ 0.04
SSBP1-202ENST00000461433 PPP2R1AP30153 589 aa15.3■□□□□ 0.04
SSBP1-202ENST00000461433 MTHFSP49914 203 aa15.3■□□□□ 0.04
SSBP1-202ENST00000461433 ATRNO75882 1429 aa15.3■□□□□ 0.04
SSBP1-202ENST00000461433 INSRP06213 1382 aa15.3■□□□□ 0.04
SSBP1-202ENST00000461433 PPM1GO15355 546 aaPredicted RBP15.29■□□□□ 0.04
SSBP1-202ENST00000461433 ZNF772Q68DY9 489 aaPredicted RBP15.29■□□□□ 0.04
SSBP1-202ENST00000461433 PRKRIP1Q9H875 184 aaPredicted RBP15.29■□□□□ 0.04
SSBP1-202ENST00000461433 STRN4Q9NRL3 753 aa15.29■□□□□ 0.04
SSBP1-202ENST00000461433 ERBB3P21860 1342 aa15.29■□□□□ 0.04
SSBP1-202ENST00000461433 CDK12Q9NYV4 1490 aaPredicted RBP15.28■□□□□ 0.04
SSBP1-202ENST00000461433 RALBP1Q15311 655 aa15.28■□□□□ 0.04
SSBP1-202ENST00000461433 VPS72Q15906 364 aa15.28■□□□□ 0.04
SSBP1-202ENST00000461433 LARP1Q6PKG0 1096 aaKnown RBP15.28■□□□□ 0.04
SSBP1-202ENST00000461433 POTEAQ6S8J7 498 aa15.28■□□□□ 0.04
SSBP1-202ENST00000461433 RGPD2P0DJD1 1756 aa15.28■□□□□ 0.04
SSBP1-202ENST00000461433 EVA1CP58658 441 aa15.28■□□□□ 0.04
SSBP1-202ENST00000461433 ANKRD24Q8TF21 1146 aa15.28■□□□□ 0.04
SSBP1-202ENST00000461433 QTRT2Q9H974 415 aaKnown RBP15.28■□□□□ 0.04
SSBP1-202ENST00000461433 WDR17Q8IZU2 1322 aa15.27■□□□□ 0.04
SSBP1-202ENST00000461433 TRPC5Q9UL62 973 aaPredicted RBP15.27■□□□□ 0.03
SSBP1-202ENST00000461433 GLI3P10071 1580 aa15.26■□□□□ 0.03
SSBP1-202ENST00000461433 SPATA31A5Q5VU36 1347 aa15.26■□□□□ 0.03
SSBP1-202ENST00000461433 SPATA31A7Q8IWB4 1347 aa15.26■□□□□ 0.03
SSBP1-202ENST00000461433 FAM208AQ9UK61 1670 aaKnown RBP15.26■□□□□ 0.03
SSBP1-202ENST00000461433 CRB1P82279 1406 aa15.26■□□□□ 0.03
SSBP1-202ENST00000461433 LTV1Q96GA3 475 aaPredicted RBP15.25■□□□□ 0.03
SSBP1-202ENST00000461433 GJD4Q96KN9 370 aaPredicted RBP15.25■□□□□ 0.03
SSBP1-202ENST00000461433 COL3A1P02461 1466 aaPredicted RBP15.25■□□□□ 0.03
SSBP1-202ENST00000461433 SPATA31A1Q5TZJ5 1347 aa15.24■□□□□ 0.03
SSBP1-202ENST00000461433 EIF4A2Q14240 407 aaKnown RBP15.24■□□□□ 0.03
SSBP1-202ENST00000461433 TOM1L2Q6ZVM7 507 aa15.23■□□□□ 0.03
SSBP1-202ENST00000461433 MYBBP1AQ9BQG0 1328 aaKnown RBP15.23■□□□□ 0.03
SSBP1-202ENST00000461433 CSB-PGBD3P0DP91 1061 aa15.22■□□□□ 0.03
SSBP1-202ENST00000461433 NBPF6Q5VWK0 638 aa15.22■□□□□ 0.03
SSBP1-202ENST00000461433 NBPF4Q96M43 638 aa15.22■□□□□ 0.03
SSBP1-202ENST00000461433 CARD10Q9BWT7 1032 aa15.22■□□□□ 0.03
SSBP1-202ENST00000461433 RGPD1P0DJD0 1748 aa15.22■□□□□ 0.03
SSBP1-202ENST00000461433 IL13P35225 146 aa15.22■□□□□ 0.03
SSBP1-202ENST00000461433 RBM6P78332 1123 aaKnown RBP15.22■□□□□ 0.03
SSBP1-202ENST00000461433 CCDC9Q9Y3X0 531 aaKnown RBP15.22■□□□□ 0.03
SSBP1-202ENST00000461433 NLRP2Q9NX02 1062 aa15.21■□□□□ 0.03
SSBP1-202ENST00000461433 USP35Q9P2H5 1018 aa15.21■□□□□ 0.03
SSBP1-202ENST00000461433 WNK3Q9BYP7 1800 aa15.2■□□□□ 0.02
SSBP1-202ENST00000461433 NCAPD2Q15021 1401 aa15.2■□□□□ 0.02
SSBP1-202ENST00000461433 ANP32CO43423 234 aa15.2■□□□□ 0.02
SSBP1-202ENST00000461433 ONECUT3O60422 494 aaPredicted RBP15.2■□□□□ 0.02
SSBP1-202ENST00000461433 EYA1Q99502 592 aa15.2■□□□□ 0.02
SSBP1-202ENST00000461433 RXRBP28702 533 aa15.19■□□□□ 0.02
SSBP1-202ENST00000461433 TCP11L2Q8N4U5 519 aa15.19■□□□□ 0.02
SSBP1-202ENST00000461433 THRAP3Q9Y2W1 955 aaKnown RBP15.19■□□□□ 0.02
SSBP1-202ENST00000461433 THSD7AQ9UPZ6 1657 aa15.19■□□□□ 0.02
SSBP1-202ENST00000461433 DIAPH1O60610 1272 aaKnown RBP15.19■□□□□ 0.02
SSBP1-202ENST00000461433 BARGINQ6ZT62 677 aa15.19■□□□□ 0.02
SSBP1-202ENST00000461433 FAM98CQ17RN3 349 aaKnown RBP15.18■□□□□ 0.02
SSBP1-202ENST00000461433 DIEXFQ68CQ4 756 aaKnown RBP15.18■□□□□ 0.02
SSBP1-202ENST00000461433 USHBP1Q8N6Y0 703 aa15.18■□□□□ 0.02
SSBP1-202ENST00000461433 IGSF1Q8N6C5 1336 aa15.18■□□□□ 0.02
SSBP1-202ENST00000461433 DISP2A7MBM2 1401 aa15.17■□□□□ 0.02
SSBP1-202ENST00000461433 CFAP53Q96M91 514 aa15.17■□□□□ 0.02
SSBP1-202ENST00000461433 SOCS7O14512 581 aa15.16■□□□□ 0.02
SSBP1-202ENST00000461433 CCDC184Q52MB2 194 aa15.16■□□□□ 0.02
SSBP1-202ENST00000461433 PARP4Q9UKK3 1724 aaKnown RBP15.15■□□□□ 0.02
SSBP1-202ENST00000461433 BRWD3Q6RI45 1802 aa15.15■□□□□ 0.02
SSBP1-202ENST00000461433 RGS12O14924 1447 aa15.15■□□□□ 0.02
SSBP1-202ENST00000461433 MEGF6O75095 1541 aa15.14■□□□□ 0.01
SSBP1-202ENST00000461433 AEBP1Q8IUX7 1158 aa15.14■□□□□ 0.01
SSBP1-202ENST00000461433 KDRP35968 1356 aa15.13■□□□□ 0.01
SSBP1-202ENST00000461433 IL2RBP14784 551 aa15.13■□□□□ 0.01
SSBP1-202ENST00000461433 SEPT12Q8IYM1 358 aa15.13■□□□□ 0.01
SSBP1-202ENST00000461433 LRRC37A3O60309 1634 aa15.13■□□□□ 0.01
SSBP1-202ENST00000461433 SULT6B1Q6IMI4 303 aa15.12■□□□□ 0.01
SSBP1-202ENST00000461433 CDCA7Q9BWT1 371 aaPredicted RBP15.12■□□□□ 0.01
SSBP1-202ENST00000461433 SHANK3Q9BYB0 1731 aa15.11■□□□□ 0.01
SSBP1-202ENST00000461433 U2SURPO15042 1029 aaKnown RBP15.11■□□□□ 0.01
SSBP1-202ENST00000461433 NUDCQ9Y266 331 aa15.11■□□□□ 0.01
SSBP1-202ENST00000461433 OVOS2A0A0G2JMS6 1433 aa15.11■□□□□ 0.01
SSBP1-202ENST00000461433 HMOX1P09601 288 aa15.1■□□□□ 0.01
SSBP1-202ENST00000461433 PKD1L3Q7Z443 1732 aa15.1■□□□□ 0.01
SSBP1-202ENST00000461433 RAPGEF4Q8WZA2 1011 aa15.09■□□□□ 0.01
Retrieved 100 of 20,778 RNA–protein pairs in 51.4 ms