RNA–Protein interactions for RNA: ENST00000461249.1

GPN1-206, Transcript of GPN-loop GTPase 1, humanhuman

TSL 1 (best)

Gene GPN1, Length 969 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GPN1-206ENST00000461249 PER1O15534 1290 aaPredicted RBP11.06□□□□□ -0.64
GPN1-206ENST00000461249 ADAMTS2O95450 1211 aa11.06□□□□□ -0.64
GPN1-206ENST00000461249 DDX10Q13206 875 aaKnown RBP11.06□□□□□ -0.64
GPN1-206ENST00000461249 NBR1Q14596 966 aa11.06□□□□□ -0.64
GPN1-206ENST00000461249 GGNBP2Q9H3C7 697 aa11.06□□□□□ -0.64
GPN1-206ENST00000461249 USP19O94966 1318 aa11.06□□□□□ -0.64
GPN1-206ENST00000461249 CGNL1Q0VF96 1302 aa11.06□□□□□ -0.64
GPN1-206ENST00000461249 GCP02774 474 aa11.05□□□□□ -0.64
GPN1-206ENST00000461249 MED1Q15648 1581 aaPredicted RBP11.05□□□□□ -0.64
GPN1-206ENST00000461249 MEX3CQ5U5Q3 659 aaKnown RBP11.05□□□□□ -0.64
GPN1-206ENST00000461249 COG3Q96JB2 828 aa11.05□□□□□ -0.64
GPN1-206ENST00000461249 ZBTB47Q9UFB7 747 aaPredicted RBP11.05□□□□□ -0.64
GPN1-206ENST00000461249 SOX12O15370 315 aa11.04□□□□□ -0.64
GPN1-206ENST00000461249 ZC3H6P61129 1189 aaKnown RBP11.04□□□□□ -0.64
GPN1-206ENST00000461249 KCNH5Q8NCM2 988 aa11.04□□□□□ -0.64
GPN1-206ENST00000461249 LRP6O75581 1613 aa11.03□□□□□ -0.64
GPN1-206ENST00000461249 HS6ST3Q8IZP7 471 aa11.03□□□□□ -0.64
GPN1-206ENST00000461249 KIF20BQ96Q89 1820 aa11.02□□□□□ -0.64
GPN1-206ENST00000461249 MARF1Q9Y4F3 1742 aaKnown RBP11.02□□□□□ -0.65
GPN1-206ENST00000461249 CRYBG1Q9Y4K1 1723 aa11.02□□□□□ -0.65
GPN1-206ENST00000461249 FAM83GA6ND36 823 aa11.02□□□□□ -0.65
GPN1-206ENST00000461249 NGLY1Q96IV0 654 aa11.02□□□□□ -0.65
GPN1-206ENST00000461249 C8orf37Q96NL8 207 aa11.02□□□□□ -0.65
GPN1-206ENST00000461249 SLIT3O75094 1523 aa11.02□□□□□ -0.65
GPN1-206ENST00000461249 OVOS2A0A0J9YW53 1432 aa11.01□□□□□ -0.65
GPN1-206ENST00000461249 OVOS2Q6IE36 1432 aa11.01□□□□□ -0.65
GPN1-206ENST00000461249 ABCA3Q99758 1704 aa11.01□□□□□ -0.65
GPN1-206ENST00000461249 ZBTB7CA1YPR0 619 aa11.01□□□□□ -0.65
GPN1-206ENST00000461249 FBLN1P23142 703 aa11.01□□□□□ -0.65
GPN1-206ENST00000461249 CNGB1Q14028 1251 aaPredicted RBP11.01□□□□□ -0.65
GPN1-206ENST00000461249 CC2D1BQ5T0F9 858 aaKnown RBP11.01□□□□□ -0.65
GPN1-206ENST00000461249 MORC1Q86VD1 984 aa11.01□□□□□ -0.65
GPN1-206ENST00000461249 PRDM11Q9NQV5 511 aa11.01□□□□□ -0.65
GPN1-206ENST00000461249 PHRF1Q9P1Y6 1649 aaKnown RBP11.01□□□□□ -0.65
GPN1-206ENST00000461249 USP54Q70EL1 1684 aa11.01□□□□□ -0.65
GPN1-206ENST00000461249 KIAA0232Q92628 1395 aa11.01□□□□□ -0.65
GPN1-206ENST00000461249 CHRNA2Q15822 529 aa11□□□□□ -0.65
GPN1-206ENST00000461249 ARHGEF25Q86VW2 580 aa11□□□□□ -0.65
GPN1-206ENST00000461249 NSD2O96028 1365 aa11□□□□□ -0.65
GPN1-206ENST00000461249 TNNT2P45379 298 aaPredicted RBP10.99□□□□□ -0.65
GPN1-206ENST00000461249 CPDO75976 1380 aa10.99□□□□□ -0.65
GPN1-206ENST00000461249 RRS1Q15050 365 aaKnown RBP10.98□□□□□ -0.65
GPN1-206ENST00000461249 FNBP4Q8N3X1 1017 aaPredicted RBP10.98□□□□□ -0.65
GPN1-206ENST00000461249 RNF25Q96BH1 459 aaPredicted RBP10.98□□□□□ -0.65
GPN1-206ENST00000461249 AFF2P51816 1311 aa10.98□□□□□ -0.65
GPN1-206ENST00000461249 NPC1L1Q9UHC9 1359 aa10.98□□□□□ -0.65
GPN1-206ENST00000461249 NFAT5O94916 1531 aa10.98□□□□□ -0.65
GPN1-206ENST00000461249 BTG4Q9NY30 223 aa10.97□□□□□ -0.65
GPN1-206ENST00000461249 USP21Q9UK80 565 aa10.97□□□□□ -0.65
GPN1-206ENST00000461249 ANKRD26Q9UPS8 1709 aa10.97□□□□□ -0.65
GPN1-206ENST00000461249 AATKQ6ZMQ8 1374 aa10.96□□□□□ -0.65
GPN1-206ENST00000461249 MAP3K19Q56UN5 1328 aa10.96□□□□□ -0.65
GPN1-206ENST00000461249 AMPHP49418 695 aa10.96□□□□□ -0.65
GPN1-206ENST00000461249 AXIN2Q9Y2T1 843 aa10.96□□□□□ -0.65
GPN1-206ENST00000461249 COL14A1Q05707 1796 aaKnown RBP10.95□□□□□ -0.66
GPN1-206ENST00000461249 SLIT2O94813 1529 aa10.95□□□□□ -0.66
GPN1-206ENST00000461249 EVA1CP58658 441 aa10.95□□□□□ -0.66
GPN1-206ENST00000461249 ZNF772Q68DY9 489 aaPredicted RBP10.95□□□□□ -0.66
GPN1-206ENST00000461249 UNC5CLQ8IV45 518 aa10.95□□□□□ -0.66
GPN1-206ENST00000461249 IP6K1Q92551 441 aa10.95□□□□□ -0.66
GPN1-206ENST00000461249 POLKQ9UBT6 870 aa10.95□□□□□ -0.66
GPN1-206ENST00000461249 RGS17Q9UGC6 210 aaPredicted RBP10.95□□□□□ -0.66
GPN1-206ENST00000461249 EMILIN1Q9Y6C2 1016 aa10.95□□□□□ -0.66
GPN1-206ENST00000461249 MAP2P11137 1827 aaKnown RBP10.95□□□□□ -0.66
GPN1-206ENST00000461249 BCL9LQ86UU0 1499 aa10.94□□□□□ -0.66
GPN1-206ENST00000461249 PPM1GO15355 546 aaPredicted RBP10.94□□□□□ -0.66
GPN1-206ENST00000461249 HOXC9P31274 260 aa10.94□□□□□ -0.66
GPN1-206ENST00000461249 QTRT2Q9H974 415 aaKnown RBP10.94□□□□□ -0.66
GPN1-206ENST00000461249 STRN4Q9NRL3 753 aa10.94□□□□□ -0.66
GPN1-206ENST00000461249 LTN1O94822 1766 aa10.94□□□□□ -0.66
GPN1-206ENST00000461249 COL18A1P39060 1754 aa10.94□□□□□ -0.66
GPN1-206ENST00000461249 CAMTA1Q9Y6Y1 1673 aa10.94□□□□□ -0.66
GPN1-206ENST00000461249 PLCH1Q4KWH8 1693 aa10.93□□□□□ -0.66
GPN1-206ENST00000461249 NWD2Q9ULI1 1742 aa10.92□□□□□ -0.66
GPN1-206ENST00000461249 LMO7Q8WWI1 1683 aa10.92□□□□□ -0.66
GPN1-206ENST00000461249 HSP90AB2PQ58FF8 381 aa10.92□□□□□ -0.66
GPN1-206ENST00000461249 LTV1Q96GA3 475 aaPredicted RBP10.92□□□□□ -0.66
GPN1-206ENST00000461249 TRPC5Q9UL62 973 aaPredicted RBP10.92□□□□□ -0.66
GPN1-206ENST00000461249 RGPD5Q99666 1765 aa10.92□□□□□ -0.66
GPN1-206ENST00000461249 KIF24Q5T7B8 1368 aa10.91□□□□□ -0.66
GPN1-206ENST00000461249 CSB-PGBD3P0DP91 1061 aa10.91□□□□□ -0.66
GPN1-206ENST00000461249 PPP2R1AP30153 589 aa10.91□□□□□ -0.66
GPN1-206ENST00000461249 MTHFSP49914 203 aa10.91□□□□□ -0.66
GPN1-206ENST00000461249 NKX1-1Q15270 411 aaPredicted RBP10.91□□□□□ -0.66
GPN1-206ENST00000461249 RALBP1Q15311 655 aa10.91□□□□□ -0.66
GPN1-206ENST00000461249 VPS72Q15906 364 aa10.91□□□□□ -0.66
GPN1-206ENST00000461249 LARP1Q6PKG0 1096 aaKnown RBP10.91□□□□□ -0.66
GPN1-206ENST00000461249 POTEAQ6S8J7 498 aa10.91□□□□□ -0.66
GPN1-206ENST00000461249 ANKRD24Q8TF21 1146 aa10.91□□□□□ -0.66
GPN1-206ENST00000461249 CCDC9Q9Y3X0 531 aaKnown RBP10.91□□□□□ -0.66
GPN1-206ENST00000461249 RTL1A6NKG5 1358 aa10.9□□□□□ -0.66
GPN1-206ENST00000461249 FLT4P35916 1363 aa10.9□□□□□ -0.66
GPN1-206ENST00000461249 PARD3Q8TEW0 1356 aa10.9□□□□□ -0.66
GPN1-206ENST00000461249 ABCC6O95255 1503 aa10.9□□□□□ -0.66
GPN1-206ENST00000461249 PEAK1Q9H792 1746 aa10.9□□□□□ -0.66
GPN1-206ENST00000461249 COL5A2P05997 1499 aaPredicted RBP10.9□□□□□ -0.66
GPN1-206ENST00000461249 GSE1Q14687 1217 aa10.9□□□□□ -0.66
GPN1-206ENST00000461249 TOM1L2Q6ZVM7 507 aa10.9□□□□□ -0.66
GPN1-206ENST00000461249 ATRNO75882 1429 aa10.9□□□□□ -0.66
GPN1-206ENST00000461249 BLMP54132 1417 aaPredicted RBP10.9□□□□□ -0.66
Retrieved 100 of 20,778 RNA–protein pairs in 14.3 ms