RNA–Protein interactions for RNA: ENST00000461018.5

CNN3-204, Transcript of calponin 3, humanhuman

TSL 2

Gene CNN3, Length 568 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CNN3-204ENST00000461018 CTC1Q2NKJ3 1217 aa7.57□□□□□ -1.2
CNN3-204ENST00000461018 SCUBE3Q8IX30 993 aa7.57□□□□□ -1.2
CNN3-204ENST00000461018 CYP4X1Q8N118 509 aa7.56□□□□□ -1.2
CNN3-204ENST00000461018 SPSB2Q99619 263 aa7.56□□□□□ -1.2
CNN3-204ENST00000461018 ESF1Q9H501 851 aaKnown RBP7.56□□□□□ -1.2
CNN3-204ENST00000461018 GMPR2Q9P2T1 348 aaKnown RBP7.56□□□□□ -1.2
CNN3-204ENST00000461018 DACH1Q9UI36 760 aa7.56□□□□□ -1.2
CNN3-204ENST00000461018 CTTNBP2Q8WZ74 1663 aa7.56□□□□□ -1.2
CNN3-204ENST00000461018 ZMYM3Q14202 1370 aa7.56□□□□□ -1.2
CNN3-204ENST00000461018 CFAP74Q9C0B2 1584 aa7.55□□□□□ -1.2
CNN3-204ENST00000461018 DIP2CQ9Y2E4 1556 aa7.55□□□□□ -1.2
CNN3-204ENST00000461018 PTPRKQ15262 1439 aa7.55□□□□□ -1.2
CNN3-204ENST00000461018 CD2BP2O95400 341 aaKnown RBP7.55□□□□□ -1.2
CNN3-204ENST00000461018 TRIM52Q96A61 297 aa7.55□□□□□ -1.2
CNN3-204ENST00000461018 TOR4AQ9NXH8 423 aa7.55□□□□□ -1.2
CNN3-204ENST00000461018 RAPGEF6Q8TEU7 1601 aa7.55□□□□□ -1.2
CNN3-204ENST00000461018 PLA2R1Q13018 1463 aa7.55□□□□□ -1.2
CNN3-204ENST00000461018 CPS1P31327 1500 aa7.54□□□□□ -1.2
CNN3-204ENST00000461018 WIPF1O43516 503 aa7.54□□□□□ -1.2
CNN3-204ENST00000461018 ZMYND10O75800 440 aa7.54□□□□□ -1.2
CNN3-204ENST00000461018 FUT2Q10981 343 aa7.54□□□□□ -1.2
CNN3-204ENST00000461018 BARGINQ6ZT62 677 aa7.54□□□□□ -1.2
CNN3-204ENST00000461018 VWDEQ8N2E2 1590 aa7.54□□□□□ -1.2
CNN3-204ENST00000461018 STRCP1A6NGW2 1772 aa7.54□□□□□ -1.2
CNN3-204ENST00000461018 PLCH2O75038 1416 aa7.53□□□□□ -1.2
CNN3-204ENST00000461018 SUPT6HQ7KZ85 1726 aaKnown RBP7.53□□□□□ -1.2
CNN3-204ENST00000461018 GCGRP47871 477 aa7.53□□□□□ -1.2
CNN3-204ENST00000461018 SMCPP49901 116 aaPredicted RBP7.53□□□□□ -1.2
CNN3-204ENST00000461018 NFX1Q12986 1120 aaKnown RBP7.53□□□□□ -1.2
CNN3-204ENST00000461018 NEURL4Q96JN8 1562 aa7.53□□□□□ -1.2
CNN3-204ENST00000461018 NPATQ14207 1427 aa7.52□□□□□ -1.2
CNN3-204ENST00000461018 ABCA6Q8N139 1617 aa7.52□□□□□ -1.2
CNN3-204ENST00000461018 CEP170BQ9Y4F5 1589 aaPredicted RBP7.52□□□□□ -1.21
CNN3-204ENST00000461018 CLCN1P35523 988 aa7.52□□□□□ -1.21
CNN3-204ENST00000461018 TTLL12Q14166 644 aaPredicted RBP7.52□□□□□ -1.21
CNN3-204ENST00000461018 GPCPD1Q9NPB8 672 aa7.52□□□□□ -1.21
CNN3-204ENST00000461018 MYO3AQ8NEV4 1616 aa7.52□□□□□ -1.21
CNN3-204ENST00000461018 ATP6V1AP38606 617 aa7.51□□□□□ -1.21
CNN3-204ENST00000461018 RANGAP1P46060 587 aaPredicted RBP7.51□□□□□ -1.21
CNN3-204ENST00000461018 BCANQ96GW7 911 aa7.51□□□□□ -1.21
CNN3-204ENST00000461018 AGLP35573 1532 aa7.51□□□□□ -1.21
CNN3-204ENST00000461018 LRRC7Q96NW7 1537 aa7.51□□□□□ -1.21
CNN3-204ENST00000461018 ZNF142P52746 1687 aaPredicted RBP7.51□□□□□ -1.21
CNN3-204ENST00000461018 CD46P15529 392 aa7.5□□□□□ -1.21
CNN3-204ENST00000461018 EFCAB2Q5VUJ9 269 aa7.5□□□□□ -1.21
CNN3-204ENST00000461018 FCF1Q9Y324 198 aaKnown RBP7.5□□□□□ -1.21
CNN3-204ENST00000461018 MORN1Q5T089 497 aa7.49□□□□□ -1.21
CNN3-204ENST00000461018 SLC27A5Q9Y2P5 690 aa7.49□□□□□ -1.21
CNN3-204ENST00000461018 CNTLNQ9NXG0 1405 aa7.49□□□□□ -1.21
CNN3-204ENST00000461018 KDM5CP41229 1560 aa7.49□□□□□ -1.21
CNN3-204ENST00000461018 REREQ9P2R6 1566 aa7.49□□□□□ -1.21
CNN3-204ENST00000461018 DNMT1P26358 1616 aaKnown RBP7.49□□□□□ -1.21
CNN3-204ENST00000461018 TTC24A2A3L6 582 aaPredicted RBP7.48□□□□□ -1.21
CNN3-204ENST00000461018 KDM4AO75164 1064 aa7.48□□□□□ -1.21
CNN3-204ENST00000461018 GRIPAP1Q4V328 841 aa7.48□□□□□ -1.21
CNN3-204ENST00000461018 REPIN1Q9BWE0 567 aaKnown RBP7.48□□□□□ -1.21
CNN3-204ENST00000461018 CLTCQ00610 1675 aaKnown RBP7.47□□□□□ -1.21
CNN3-204ENST00000461018 SETBP1Q9Y6X0 1596 aa7.47□□□□□ -1.21
CNN3-204ENST00000461018 SSTR3P32745 418 aaPredicted RBP7.47□□□□□ -1.21
CNN3-204ENST00000461018 FBXO31Q5XUX0 539 aaPredicted RBP7.47□□□□□ -1.21
CNN3-204ENST00000461018 NUTM1Q86Y26 1132 aa7.47□□□□□ -1.21
CNN3-204ENST00000461018 FAM9AQ8IZU1 332 aaPredicted RBP7.47□□□□□ -1.21
CNN3-204ENST00000461018 FAM217BQ9NTX9 383 aaPredicted RBP7.47□□□□□ -1.21
CNN3-204ENST00000461018 ZNF518AQ6AHZ1 1483 aa7.47□□□□□ -1.21
CNN3-204ENST00000461018 CDK13Q14004 1512 aaKnown RBP7.47□□□□□ -1.21
CNN3-204ENST00000461018 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP7.46□□□□□ -1.21
CNN3-204ENST00000461018 ZBTB24O43167 697 aaPredicted RBP7.46□□□□□ -1.22
CNN3-204ENST00000461018 SLC24A3Q9HC58 644 aa7.46□□□□□ -1.22
CNN3-204ENST00000461018 A2ML1A8K2U0 1454 aa7.46□□□□□ -1.22
CNN3-204ENST00000461018 MLH3Q9UHC1 1453 aa7.46□□□□□ -1.22
CNN3-204ENST00000461018 MROH2AA6NES4 1674 aa7.46□□□□□ -1.22
CNN3-204ENST00000461018 POLR1AO95602 1720 aaPredicted RBP7.45□□□□□ -1.22
CNN3-204ENST00000461018 TERTO14746 1132 aaKnown RBP7.45□□□□□ -1.22
CNN3-204ENST00000461018 FMNL1O95466 1100 aaPredicted RBP7.45□□□□□ -1.22
CNN3-204ENST00000461018 HLA-CQ95604 372 aa7.45□□□□□ -1.22
CNN3-204ENST00000461018 AK7Q96M32 723 aa7.45□□□□□ -1.22
CNN3-204ENST00000461018 SENP2Q9HC62 589 aa7.45□□□□□ -1.22
CNN3-204ENST00000461018 ATP13A2Q9NQ11 1180 aa7.45□□□□□ -1.22
CNN3-204ENST00000461018 SAMD9Q5K651 1589 aa7.45□□□□□ -1.22
CNN3-204ENST00000461018 NPHP4O75161 1426 aaPredicted RBP7.44□□□□□ -1.22
CNN3-204ENST00000461018 KIDINS220Q9ULH0 1771 aa7.44□□□□□ -1.22
CNN3-204ENST00000461018 XIRP1Q702N8 1843 aaKnown RBP7.44□□□□□ -1.22
CNN3-204ENST00000461018 TRIM66O15016 1216 aa7.44□□□□□ -1.22
CNN3-204ENST00000461018 GGT6Q6P531 493 aa7.44□□□□□ -1.22
CNN3-204ENST00000461018 GIGYF2Q6Y7W6 1299 aaKnown RBP7.44□□□□□ -1.22
CNN3-204ENST00000461018 RNF19BQ6ZMZ0 732 aa7.44□□□□□ -1.22
CNN3-204ENST00000461018 ANKLE2Q86XL3 938 aa7.44□□□□□ -1.22
CNN3-204ENST00000461018 THAP11Q96EK4 314 aa7.44□□□□□ -1.22
CNN3-204ENST00000461018 RNF17Q9BXT8 1623 aaKnown RBP7.44□□□□□ -1.22
CNN3-204ENST00000461018 LRP6O75581 1613 aa7.43□□□□□ -1.22
CNN3-204ENST00000461018 FAM181BA6NEQ2 426 aa7.43□□□□□ -1.22
CNN3-204ENST00000461018 FAM160A2Q8N612 972 aaPredicted RBP7.43□□□□□ -1.22
CNN3-204ENST00000461018 SNIP1Q8TAD8 396 aaKnown RBP7.43□□□□□ -1.22
CNN3-204ENST00000461018 TRIM47Q96LD4 638 aa7.43□□□□□ -1.22
CNN3-204ENST00000461018 FAM135BQ49AJ0 1406 aa7.43□□□□□ -1.22
CNN3-204ENST00000461018 PRXQ9BXM0 1461 aa7.43□□□□□ -1.22
CNN3-204ENST00000461018 KIF14Q15058 1648 aa7.42□□□□□ -1.22
CNN3-204ENST00000461018 WNT7AO00755 349 aa7.42□□□□□ -1.22
CNN3-204ENST00000461018 SNRPBP14678 240 aaKnown RBP7.42□□□□□ -1.22
CNN3-204ENST00000461018 GUCA2AQ02747 115 aa7.42□□□□□ -1.22
Retrieved 100 of 20,778 RNA–protein pairs in 56.1 ms